FFCP PHASE1:Hg19::chr10:15646574..15646578,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8516|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6144|TSSclassifier=N|UniProt=|association_with_transcript=-305bp_to_ENST00000477064_5end|coexpression_cluster_id=C230|description=CAGE_peak_11_at_ITGA8_5end|id=chr10:15646574..15646578,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;3.99e-50;1!UBERON:0004874;3.99e-50;1!UBERON:0006965;4.32e-26;2!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.32e-23!115;UBERON:0003135!6.59e-09!11;UBERON:0003101!8.10e-09!22;UBERON:0000079!8.10e-09!22;UBERON:0003127!9.59e-07!2|ontology_enrichment_uberon_v019=UBERON:0000989;3.99e-50;1!UBERON:0002146;3.99e-50;1!UBERON:0008811;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.42e-50,1;UBERON:0008811,2.42e-50,1;UBERON:0006258,2.42e-50,1;UBERON:0005876,2.42e-50,1;UBERON:0004874,2.42e-50,1;UBERON:0002146,3.99e-50,1;UBERON:0005623,3.99e-50,1;UBERON:0003978,9.46e-18,3;UBERON:0009751,9.46e-18,3;UBERON:0000946,9.46e-18,3;UBERON:0002523,9.46e-18,3;UBERON:0005983,9.46e-18,3;UBERON:0002165,9.46e-18,3;UBERON:0002062,9.46e-18,3;UBERON:0007280,9.46e-18,3;UBERON:0004797,2.18e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,4.18420775327246,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,2.52076466412852,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0.0788617450012534,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0.913158720509496,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.665320713092027,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.603821380773079,0|short_description=p11@ITGA8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-305bp_to_ENST00000477064_5end | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_11_at_ITGA8_5end | |||
|id=chr10:15646574..15646578,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.99e-50;1!UBERON:0004874;3.99e-50;1!UBERON:0006965;4.32e-26;2!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-23!115;UBERON:0003135!6.59e-09!11;UBERON:0003101!8.10e-09!22;UBERON:0000079!8.10e-09!22;UBERON:0003127!9.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;3.99e-50;1!UBERON:0002146;3.99e-50;1!UBERON:0008811;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.42e-50,1;UBERON:0008811,2.42e-50,1;UBERON:0006258,2.42e-50,1;UBERON:0005876,2.42e-50,1;UBERON:0004874,2.42e-50,1;UBERON:0002146,3.99e-50,1;UBERON:0005623,3.99e-50,1;UBERON:0003978,9.46e-18,3;UBERON:0009751,9.46e-18,3;UBERON:0000946,9.46e-18,3;UBERON:0002523,9.46e-18,3;UBERON:0005983,9.46e-18,3;UBERON:0002165,9.46e-18,3;UBERON:0002062,9.46e-18,3;UBERON:0007280,9.46e-18,3;UBERON:0004797,2.18e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.919463387397059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,4.18420775327246,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,2.52076466412852,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0.0788617450012534,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0.913158720509496,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.665320713092027,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p11@ITGA8 | |||
}} |
Revision as of 12:36, 10 September 2013
Short description: | p11@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -305bp_to_ENST00000477064_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
penis | 2.42e-50 | 1 |
intromittent organ | 2.42e-50 | 1 |
lateral plate mesenchyme | 2.42e-50 | 1 |
undifferentiated genital tubercle | 2.42e-50 | 1 |
somatopleure | 2.42e-50 | 1 |
pulmonary valve | 3.99e-50 | 1 |
semi-lunar valve | 3.99e-50 | 1 |
valve | 9.46e-18 | 3 |
cardiac mesenchyme | 9.46e-18 | 3 |
cardial valve | 9.46e-18 | 3 |
tunica intima | 9.46e-18 | 3 |
heart layer | 9.46e-18 | 3 |
endocardium | 9.46e-18 | 3 |
endocardial cushion | 9.46e-18 | 3 |
presumptive endocardium | 9.46e-18 | 3 |
blood vessel layer | 2.18e-08 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.