FFCP PHASE1:Hg19::chr10:106113583..106113597,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=159686|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26676|TSSclassifier=S|UniProt=Q9H4Y4|association_with_transcript=49bp_to_ENST00000312902_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_CCDC147_5end|id=chr10:106113583..106113597,+|ontology_enrichment_celltype=CL:0002057!2.98e-58!42;CL:0000860!1.99e-53!45;CL:0000766!3.02e-49!76;CL:0000557!3.83e-39!71;CL:0000839!5.15e-38!70;CL:0002009!1.13e-37!65;CL:0002194!2.49e-37!63;CL:0000576!2.49e-37!63;CL:0000040!2.49e-37!63;CL:0000559!2.49e-37!63;CL:0000738!7.42e-35!140;CL:0000763!2.00e-29!112;CL:0000049!2.00e-29!112;CL:0002031!1.52e-27!124;CL:0002087!6.53e-27!119;CL:0000037!9.80e-25!172;CL:0000566!9.80e-25!172;CL:0002032!2.97e-24!165;CL:0000837!2.97e-24!165;CL:0000988!2.50e-22!182;CL:0000094!1.40e-11!8;CL:0002393!8.51e-11!9;CL:0002397!8.51e-11!9;CL:0000081!5.38e-08!11|ontology_enrichment_celltype_v019=CL:0000860;9.69e-48;33!CL:0002057;9.69e-48;33!CL:0000473;1.36e-32;39!CL:0000234;1.36e-32;39!CL:0000094;7.29e-31;8!CL:0000576;1.98e-26;48!CL:0000766;1.07e-25;69!CL:0000081;3.32e-22;11!CL:0000767;5.04e-15;3!CL:0000771;5.06e-12;2!CL:0000763;6.65e-12;100!CL:0002087;4.02e-09;104!CL:0000775;3.18e-08;3!CL:0000738;4.24e-08;136!CL:0002393;9.21e-08;6!CL:0002397;9.21e-08;6|ontology_enrichment_celltype_v019_2=CL:0000766,2.29e-56,72;CL:0000860,2.35e-53,42;CL:0002057,2.35e-53,42;CL:0000473,4.62e-46,48;CL:0000234,4.62e-46,48;CL:0002194,7.53e-36,59;CL:0000576,7.53e-36,59;CL:0000040,7.53e-36,59;CL:0000559,7.53e-36,59;CL:0000763,1.20e-35,108;CL:0000049,1.20e-35,108;CL:0000839,1.10e-34,66;CL:0002009,1.57e-34,61;CL:0000557,4.23e-34,67;CL:0000094,5.00e-31,8;CL:0000738,3.52e-29,136;CL:0000037,2.06e-22,168;CL:0000081,2.53e-22,11;CL:0002032,6.97e-22,161;CL:0000837,6.97e-22,161;CL:0000988,6.03e-21,177;CL:0002087,6.94e-18,115;CL:0002031,6.78e-17,120;CL:0000767,3.31e-15,3;CL:0000771,5.07e-12,2;CL:0000775,3.18e-08,3;CL:0000134,3.12e-07,354;CL:0002320,5.75e-07,361|ontology_enrichment_development_v019=CL:0002057;2.93e-36;42!CL:0000049;2.79e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.20e-39!102;UBERON:0003061!6.20e-39!102;UBERON:0002193!6.96e-34!112;UBERON:0002371!4.21e-33!80;UBERON:0001474!8.72e-30!86;UBERON:0004765!1.55e-24!101;UBERON:0001434!1.55e-24!101;UBERON:0002405!9.61e-19!115;UBERON:0003081!1.53e-11!216;UBERON:0000178!7.91e-11!15;UBERON:0000179!7.91e-11!15;UBERON:0000463!7.91e-11!15;UBERON:0002204!1.34e-09!167;UBERON:0007023!6.85e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-20;15!UBERON:0000179;1.69e-20;15!UBERON:0000463;1.69e-20;15!UBERON:0002390;5.65e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-42,98;UBERON:0003061,1.37e-42,98;UBERON:0002193,4.36e-38,108;UBERON:0002371,1.66e-29,76;UBERON:0001474,5.36e-27,82;UBERON:0004765,3.62e-24,90;UBERON:0002405,3.13e-23,93;UBERON:0001434,2.92e-21,100;UBERON:0000178,2.14e-20,15;UBERON:0000179,2.14e-20,15;UBERON:0000463,2.14e-20,15;UBERON:0003081,2.67e-17,203;UBERON:0002204,9.51e-11,167;UBERON:0000926,7.61e-09,315;UBERON:0004120,7.61e-09,315;UBERON:0006603,7.61e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.15148819429164,1.85779347979291,0,0,0,0,0,0,1.66198622559563,1.80490002723128,1.08505435357926,0,0,0,1.30858414901608,0.377875943688809,0.727752183563449,2.55671940596253,0,4.02618282163635,0.575384784644301,0.768482119587302,2.83778675866302,2.06847408441971,5.16387746867061,6.77132432971709,0.941211697713023,0.818718450173537,3.14612878223118,3.97909060082173,2.56743221660875,7.67204550958849,0.329851300186716,0.398927315243264,1.27867425159808,5.22376629531451,2.26954089876456,6.85104473895132,0.502497330513487,0.521482918420201,1.73751075764093,7.87019353423379,3.31449872388808,6.64571013625857,0,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,42.6558290563158,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,11.2351053592077,0,23.621684265854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=159686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26676 | |||
|TSSclassifier=S | |||
|UniProt=Q9H4Y4 | |||
|association_with_transcript=49bp_to_ENST00000312902_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CCDC147_5end | |||
|id=chr10:106113583..106113597,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.98e-58!42;CL:0000860!1.99e-53!45;CL:0000766!3.02e-49!76;CL:0000557!3.83e-39!71;CL:0000839!5.15e-38!70;CL:0002009!1.13e-37!65;CL:0002194!2.49e-37!63;CL:0000576!2.49e-37!63;CL:0000040!2.49e-37!63;CL:0000559!2.49e-37!63;CL:0000738!7.42e-35!140;CL:0000763!2.00e-29!112;CL:0000049!2.00e-29!112;CL:0002031!1.52e-27!124;CL:0002087!6.53e-27!119;CL:0000037!9.80e-25!172;CL:0000566!9.80e-25!172;CL:0002032!2.97e-24!165;CL:0000837!2.97e-24!165;CL:0000988!2.50e-22!182;CL:0000094!1.40e-11!8;CL:0002393!8.51e-11!9;CL:0002397!8.51e-11!9;CL:0000081!5.38e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.69e-48;33!CL:0002057;9.69e-48;33!CL:0000473;1.36e-32;39!CL:0000234;1.36e-32;39!CL:0000094;7.29e-31;8!CL:0000576;1.98e-26;48!CL:0000766;1.07e-25;69!CL:0000081;3.32e-22;11!CL:0000767;5.04e-15;3!CL:0000771;5.06e-12;2!CL:0000763;6.65e-12;100!CL:0002087;4.02e-09;104!CL:0000775;3.18e-08;3!CL:0000738;4.24e-08;136!CL:0002393;9.21e-08;6!CL:0002397;9.21e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.29e-56,72;CL:0000860,2.35e-53,42;CL:0002057,2.35e-53,42;CL:0000473,4.62e-46,48;CL:0000234,4.62e-46,48;CL:0002194,7.53e-36,59;CL:0000576,7.53e-36,59;CL:0000040,7.53e-36,59;CL:0000559,7.53e-36,59;CL:0000763,1.20e-35,108;CL:0000049,1.20e-35,108;CL:0000839,1.10e-34,66;CL:0002009,1.57e-34,61;CL:0000557,4.23e-34,67;CL:0000094,5.00e-31,8;CL:0000738,3.52e-29,136;CL:0000037,2.06e-22,168;CL:0000081,2.53e-22,11;CL:0002032,6.97e-22,161;CL:0000837,6.97e-22,161;CL:0000988,6.03e-21,177;CL:0002087,6.94e-18,115;CL:0002031,6.78e-17,120;CL:0000767,3.31e-15,3;CL:0000771,5.07e-12,2;CL:0000775,3.18e-08,3;CL:0000134,3.12e-07,354;CL:0002320,5.75e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.93e-36;42!CL:0000049;2.79e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.20e-39!102;UBERON:0003061!6.20e-39!102;UBERON:0002193!6.96e-34!112;UBERON:0002371!4.21e-33!80;UBERON:0001474!8.72e-30!86;UBERON:0004765!1.55e-24!101;UBERON:0001434!1.55e-24!101;UBERON:0002405!9.61e-19!115;UBERON:0003081!1.53e-11!216;UBERON:0000178!7.91e-11!15;UBERON:0000179!7.91e-11!15;UBERON:0000463!7.91e-11!15;UBERON:0002204!1.34e-09!167;UBERON:0007023!6.85e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-20;15!UBERON:0000179;1.69e-20;15!UBERON:0000463;1.69e-20;15!UBERON:0002390;5.65e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-42,98;UBERON:0003061,1.37e-42,98;UBERON:0002193,4.36e-38,108;UBERON:0002371,1.66e-29,76;UBERON:0001474,5.36e-27,82;UBERON:0004765,3.62e-24,90;UBERON:0002405,3.13e-23,93;UBERON:0001434,2.92e-21,100;UBERON:0000178,2.14e-20,15;UBERON:0000179,2.14e-20,15;UBERON:0000463,2.14e-20,15;UBERON:0003081,2.67e-17,203;UBERON:0002204,9.51e-11,167;UBERON:0000926,7.61e-09,315;UBERON:0004120,7.61e-09,315;UBERON:0006603,7.61e-09,315 | |||
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|short_description=p1@CCDC147 | |||
}} |
Revision as of 11:36, 10 September 2013
Short description: | p1@CCDC147 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCDC147_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 49bp_to_ENST00000312902_5end |
EntrezGene: | CCDC147 |
HGNC: | 26676 |
UniProt: | Q9H4Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.29e-56 | 72 |
classical monocyte | 2.35e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-53 | 42 |
defensive cell | 4.62e-46 | 48 |
phagocyte | 4.62e-46 | 48 |
monopoietic cell | 7.53e-36 | 59 |
monocyte | 7.53e-36 | 59 |
monoblast | 7.53e-36 | 59 |
promonocyte | 7.53e-36 | 59 |
myeloid cell | 1.20e-35 | 108 |
common myeloid progenitor | 1.20e-35 | 108 |
myeloid lineage restricted progenitor cell | 1.10e-34 | 66 |
macrophage dendritic cell progenitor | 1.57e-34 | 61 |
granulocyte monocyte progenitor cell | 4.23e-34 | 67 |
granulocyte | 5.00e-31 | 8 |
leukocyte | 3.52e-29 | 136 |
hematopoietic stem cell | 2.06e-22 | 168 |
blood cell | 2.53e-22 | 11 |
hematopoietic oligopotent progenitor cell | 6.97e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.97e-22 | 161 |
hematopoietic cell | 6.03e-21 | 177 |
nongranular leukocyte | 6.94e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 6.78e-17 | 120 |
basophil | 3.31e-15 | 3 |
eosinophil | 5.07e-12 | 2 |
neutrophil | 3.18e-08 | 3 |
mesenchymal cell | 3.12e-07 | 354 |
connective tissue cell | 5.75e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-42 | 98 |
blood island | 1.37e-42 | 98 |
hemolymphoid system | 4.36e-38 | 108 |
bone marrow | 1.66e-29 | 76 |
bone element | 5.36e-27 | 82 |
skeletal element | 3.62e-24 | 90 |
immune system | 3.13e-23 | 93 |
skeletal system | 2.92e-21 | 100 |
blood | 2.14e-20 | 15 |
haemolymphatic fluid | 2.14e-20 | 15 |
organism substance | 2.14e-20 | 15 |
lateral plate mesoderm | 2.67e-17 | 203 |
musculoskeletal system | 9.51e-11 | 167 |
mesoderm | 7.61e-09 | 315 |
mesoderm-derived structure | 7.61e-09 | 315 |
presumptive mesoderm | 7.61e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.