FFCP PHASE1:Hg19::chr10:114847373..114847390,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=270bp_to_AK021749_5end|coexpression_cluster_id=C0|description=CAGE_peak_1_at_AK021749_5end|id=chr10:114847373..114847390,+|ontology_enrichment_celltype=CL:0000860!2.70e-42!45;CL:0002057!8.57e-41!42;CL:0002194!1.13e-26!63;CL:0000576!1.13e-26!63;CL:0000040!1.13e-26!63;CL:0000559!1.13e-26!63;CL:0002009!1.46e-25!65;CL:0000766!1.61e-25!76;CL:0000839!4.65e-23!70;CL:0000557!1.33e-22!71;CL:0000763!4.58e-14!112;CL:0000049!4.58e-14!112;CL:0002087!1.40e-13!119;CL:0000738!9.89e-13!140;CL:0002031!1.01e-10!124;CL:0000037!1.75e-08!172;CL:0000566!1.75e-08!172;CL:0002032!7.86e-08!165;CL:0000837!7.86e-08!165;CL:0000988!1.70e-07!182;CL:0000767!2.29e-07!3|ontology_enrichment_celltype_v019=CL:0000860;4.27e-54;33!CL:0002057;4.27e-54;33!CL:0000473;3.62e-38;39!CL:0000234;3.62e-38;39!CL:0000576;1.22e-33;48!CL:0000766;1.59e-23;69!CL:0002087;6.15e-15;104!CL:0002393;1.52e-14;6!CL:0002397;1.52e-14;6!CL:0000226;1.00e-12;3!CL:0000842;1.00e-12;3!CL:0000763;2.95e-10;100!CL:0000738;6.37e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-67,42;CL:0002057,1.68e-67,42;CL:0000473,9.75e-59,48;CL:0000234,9.75e-59,48;CL:0002194,1.84e-46,59;CL:0000576,1.84e-46,59;CL:0000040,1.84e-46,59;CL:0000559,1.84e-46,59;CL:0002009,7.08e-45,61;CL:0000766,3.76e-42,72;CL:0000839,2.51e-41,66;CL:0000557,1.11e-40,67;CL:0002087,2.05e-28,115;CL:0000763,2.69e-27,108;CL:0000049,2.69e-27,108;CL:0000738,3.03e-26,136;CL:0002031,1.20e-21,120;CL:0000037,1.05e-20,168;CL:0000988,1.67e-19,177;CL:0002032,2.08e-17,161;CL:0000837,2.08e-17,161;CL:0000226,1.06e-12,3;CL:0000842,1.06e-12,3;CL:0002393,7.76e-10,9;CL:0002397,7.76e-10,9;CL:0000134,3.55e-08,354;CL:0002320,5.93e-08,361;CL:0000219,3.63e-07,386|ontology_enrichment_development_v019=CL:0002057;2.68e-46;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.26e-19!80;UBERON:0001474!4.91e-17!86;UBERON:0002390!2.92e-15!102;UBERON:0003061!2.92e-15!102;UBERON:0003081!3.59e-13!216;UBERON:0004765!3.62e-13!101;UBERON:0001434!3.62e-13!101;UBERON:0002405!4.09e-13!115;UBERON:0002193!4.73e-13!112;UBERON:0002204!3.01e-10!167;UBERON:0000926!3.93e-07!448;UBERON:0004120!3.93e-07!448;UBERON:0006603!3.93e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-35,76;UBERON:0002390,8.58e-34,98;UBERON:0003061,8.58e-34,98;UBERON:0001474,7.78e-33,82;UBERON:0002193,1.99e-30,108;UBERON:0004765,1.05e-29,90;UBERON:0002405,1.14e-28,93;UBERON:0001434,1.72e-26,100;UBERON:0003081,7.40e-15,203;UBERON:0002204,8.77e-15,167;UBERON:0000926,1.84e-08,315;UBERON:0004120,1.84e-08,315;UBERON:0006603,1.84e-08,315;UBERON:0002384,1.20e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0,0.30120591877825,0,0,0,0,9.41792194504192,4.01088894940283,3.03815219002193,0,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,1.5369642391746,1.6553756092201,3.7922024881028,7.10033151942209,6.77132432971709,0.188242339542605,0,0.898893937780338,7.34601341690166,4.49300637906531,7.67204550958849,0,0,0,4.93355705668593,3.97169657283798,3.73693349397345,0.75374599577023,2.08593167368081,1.08594422352558,0.605399502633369,2.94622108790052,4.74693581161327,0,0,0,0,0,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,1.17400313583789,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1139420558470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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=270bp_to_AK021749_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_AK021749_5end | |||
|id=chr10:114847373..114847390,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.70e-42!45;CL:0002057!8.57e-41!42;CL:0002194!1.13e-26!63;CL:0000576!1.13e-26!63;CL:0000040!1.13e-26!63;CL:0000559!1.13e-26!63;CL:0002009!1.46e-25!65;CL:0000766!1.61e-25!76;CL:0000839!4.65e-23!70;CL:0000557!1.33e-22!71;CL:0000763!4.58e-14!112;CL:0000049!4.58e-14!112;CL:0002087!1.40e-13!119;CL:0000738!9.89e-13!140;CL:0002031!1.01e-10!124;CL:0000037!1.75e-08!172;CL:0000566!1.75e-08!172;CL:0002032!7.86e-08!165;CL:0000837!7.86e-08!165;CL:0000988!1.70e-07!182;CL:0000767!2.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-54;33!CL:0002057;4.27e-54;33!CL:0000473;3.62e-38;39!CL:0000234;3.62e-38;39!CL:0000576;1.22e-33;48!CL:0000766;1.59e-23;69!CL:0002087;6.15e-15;104!CL:0002393;1.52e-14;6!CL:0002397;1.52e-14;6!CL:0000226;1.00e-12;3!CL:0000842;1.00e-12;3!CL:0000763;2.95e-10;100!CL:0000738;6.37e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-67,42;CL:0002057,1.68e-67,42;CL:0000473,9.75e-59,48;CL:0000234,9.75e-59,48;CL:0002194,1.84e-46,59;CL:0000576,1.84e-46,59;CL:0000040,1.84e-46,59;CL:0000559,1.84e-46,59;CL:0002009,7.08e-45,61;CL:0000766,3.76e-42,72;CL:0000839,2.51e-41,66;CL:0000557,1.11e-40,67;CL:0002087,2.05e-28,115;CL:0000763,2.69e-27,108;CL:0000049,2.69e-27,108;CL:0000738,3.03e-26,136;CL:0002031,1.20e-21,120;CL:0000037,1.05e-20,168;CL:0000988,1.67e-19,177;CL:0002032,2.08e-17,161;CL:0000837,2.08e-17,161;CL:0000226,1.06e-12,3;CL:0000842,1.06e-12,3;CL:0002393,7.76e-10,9;CL:0002397,7.76e-10,9;CL:0000134,3.55e-08,354;CL:0002320,5.93e-08,361;CL:0000219,3.63e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.68e-46;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.26e-19!80;UBERON:0001474!4.91e-17!86;UBERON:0002390!2.92e-15!102;UBERON:0003061!2.92e-15!102;UBERON:0003081!3.59e-13!216;UBERON:0004765!3.62e-13!101;UBERON:0001434!3.62e-13!101;UBERON:0002405!4.09e-13!115;UBERON:0002193!4.73e-13!112;UBERON:0002204!3.01e-10!167;UBERON:0000926!3.93e-07!448;UBERON:0004120!3.93e-07!448;UBERON:0006603!3.93e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-35,76;UBERON:0002390,8.58e-34,98;UBERON:0003061,8.58e-34,98;UBERON:0001474,7.78e-33,82;UBERON:0002193,1.99e-30,108;UBERON:0004765,1.05e-29,90;UBERON:0002405,1.14e-28,93;UBERON:0001434,1.72e-26,100;UBERON:0003081,7.40e-15,203;UBERON:0002204,8.77e-15,167;UBERON:0000926,1.84e-08,315;UBERON:0004120,1.84e-08,315;UBERON:0006603,1.84e-08,315;UBERON:0002384,1.20e-07,371 | |||
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|short_description=p1@AK021749 | |||
}} |
Revision as of 11:48, 10 September 2013
Short description: | p1@AK021749 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK021749_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 270bp_to_AK021749_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-67 | 42 |
defensive cell | 9.75e-59 | 48 |
phagocyte | 9.75e-59 | 48 |
monopoietic cell | 1.84e-46 | 59 |
monocyte | 1.84e-46 | 59 |
monoblast | 1.84e-46 | 59 |
promonocyte | 1.84e-46 | 59 |
macrophage dendritic cell progenitor | 7.08e-45 | 61 |
myeloid leukocyte | 3.76e-42 | 72 |
myeloid lineage restricted progenitor cell | 2.51e-41 | 66 |
granulocyte monocyte progenitor cell | 1.11e-40 | 67 |
nongranular leukocyte | 2.05e-28 | 115 |
myeloid cell | 2.69e-27 | 108 |
common myeloid progenitor | 2.69e-27 | 108 |
leukocyte | 3.03e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 1.20e-21 | 120 |
hematopoietic stem cell | 1.05e-20 | 168 |
hematopoietic cell | 1.67e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.08e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-17 | 161 |
single nucleate cell | 1.06e-12 | 3 |
mononuclear cell | 1.06e-12 | 3 |
intermediate monocyte | 7.76e-10 | 9 |
CD14-positive, CD16-positive monocyte | 7.76e-10 | 9 |
mesenchymal cell | 3.55e-08 | 354 |
connective tissue cell | 5.93e-08 | 361 |
motile cell | 3.63e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-35 | 76 |
hematopoietic system | 8.58e-34 | 98 |
blood island | 8.58e-34 | 98 |
bone element | 7.78e-33 | 82 |
hemolymphoid system | 1.99e-30 | 108 |
skeletal element | 1.05e-29 | 90 |
immune system | 1.14e-28 | 93 |
skeletal system | 1.72e-26 | 100 |
lateral plate mesoderm | 7.40e-15 | 203 |
musculoskeletal system | 8.77e-15 | 167 |
mesoderm | 1.84e-08 | 315 |
mesoderm-derived structure | 1.84e-08 | 315 |
presumptive mesoderm | 1.84e-08 | 315 |
connective tissue | 1.20e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.