FFCP PHASE1:Hg19::chr11:1823998..1824003,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:1823998..1824003,-|id=chr11:1823998..1824003,-|ontology_enrichment_celltype=CL:0000003!2.13e-10!722;CL:0000548!7.15e-10!679;CL:0000004!7.15e-10!679;CL:0000255!7.15e-10!679;CL:0000012!1.26e-09!682;CL:0000144!1.90e-08!625;CL:0002371!1.98e-07!591|ontology_enrichment_celltype_v019=CL:1000507;5.00e-11;10!CL:1000494;5.00e-11;10!CL:1000449;8.81e-10;15!CL:1000497;1.65e-08;17!CL:0002518;1.65e-08;17!CL:0000650;2.13e-07;2!CL:1000500;2.13e-07;2!CL:1000618;2.13e-07;2!CL:1001318;2.13e-07;2!CL:0002173;2.13e-07;2|ontology_enrichment_celltype_v019_2=CL:1000507,3.41e-11,10;CL:1000494,3.41e-11,10;CL:1000449,6.59e-10,15;CL:1000497,1.28e-08,17;CL:0002518,1.28e-08,17;CL:0000650,2.54e-07,2;CL:1000500,2.54e-07,2;CL:1000618,2.54e-07,2;CL:1001318,2.54e-07,2;CL:0002173,2.54e-07,2;CL:0002681,9.65e-07,12;CL:0002584,9.65e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004211;5.00e-11;10!UBERON:0009773;5.00e-11;10!UBERON:0001231;5.00e-11;10!UBERON:0004810;5.00e-11;10!UBERON:0006555;8.81e-10;15!UBERON:0004819;8.81e-10;15!UBERON:0001285;8.81e-10;15!UBERON:0007684;8.81e-10;15!UBERON:0003567;2.13e-07;2!UBERON:0003838;2.13e-07;2!UBERON:0003586;2.13e-07;2!UBERON:0005169;2.13e-07;2!UBERON:0002321;2.13e-07;2!UBERON:0005215;2.13e-07;2!UBERON:0002303;2.13e-07;2!UBERON:0002319;2.13e-07;2!UBERON:0000353;2.64e-07;15!UBERON:0006554;2.84e-07;30!UBERON:0001008;2.84e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.41e-11,10;UBERON:0004211,6.59e-10,15;UBERON:0009773,6.59e-10,15;UBERON:0001231,6.59e-10,15;UBERON:0001285,6.59e-10,15;UBERON:0007684,6.59e-10,15;UBERON:0004208,6.59e-10,15;UBERON:0006555,3.19e-09,16;UBERON:0004819,3.19e-09,16;UBERON:0000353,1.96e-07,15;UBERON:0003567,2.54e-07,2;UBERON:0003838,2.54e-07,2;UBERON:0003586,2.54e-07,2;UBERON:0005169,2.54e-07,2;UBERON:0002321,2.54e-07,2;UBERON:0005215,2.54e-07,2;UBERON:0002303,2.54e-07,2;UBERON:0002319,2.54e-07,2;UBERON:0001225,9.65e-07,12;UBERON:0008987,9.65e-07,12|phase1_expression=1.2717486548939,0.856402095563933,1.26858963686374,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.873765488520689,1.05506791291381,0.495065411840187,0,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0.286235987131057,0.273748850145768,0.502170558379211,1.91033514369878,1.55991119954897,1.65292640758726,0,0,0.464448369948228,0,0,0,0.309868802321207,0.142169232487422,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0,0,0.575384784644301,0,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0,1.83650335422542,0,0,1.31940520074686,0.398927315243264,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0,1.05627643155971,0,0,0.44931452458598,0.300353785683013,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0,0,0.946895611469467,0,0.334231370655521,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0.328875809207352,0.552700035571697,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,1.34140171940727,0.639312809217652,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,1.10864698731282,0.263504357079378,0.0654895377488563,1.82147644146271,0.741568885568859,1.29818957461873,1.0447784237956,0.26591592103773,0,0,0,0.198762407366705,0,0.694281003215189,0,0,1.92582629358047,0.208994966536811,0.775250277507987,1.06729878806013,0,0,0.760272105718513,0.488124115096339,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.633152558322899,0.264818361626438,0.286836620748814,0.709336764396714,0,2.1349799145941,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.61246251376468,0.491337269247072,0,0,0.494533858557114,0,5.03032699271367,0.505008341862199,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0.453728732640084,0.179389635688862,1.49490172172997,1.27159140695737,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0.337552664482532,0.0974370051611986,0,0.552299391853796,0,0,0,0.508681776931463,0.773043412653187,0.818238361772504,0.286804595389004,0.365921118388786,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,5.14592750554308,0,1.39310378409594,0.721879481669586,0.236613600079688,0,0.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:1823998..1824003,- | |||
|id=chr11:1823998..1824003,- | |||
|ontology_enrichment_celltype=CL:0000003!2.13e-10!722;CL:0000548!7.15e-10!679;CL:0000004!7.15e-10!679;CL:0000255!7.15e-10!679;CL:0000012!1.26e-09!682;CL:0000144!1.90e-08!625;CL:0002371!1.98e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.00e-11;10!CL:1000494;5.00e-11;10!CL:1000449;8.81e-10;15!CL:1000497;1.65e-08;17!CL:0002518;1.65e-08;17!CL:0000650;2.13e-07;2!CL:1000500;2.13e-07;2!CL:1000618;2.13e-07;2!CL:1001318;2.13e-07;2!CL:0002173;2.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.41e-11,10;CL:1000494,3.41e-11,10;CL:1000449,6.59e-10,15;CL:1000497,1.28e-08,17;CL:0002518,1.28e-08,17;CL:0000650,2.54e-07,2;CL:1000500,2.54e-07,2;CL:1000618,2.54e-07,2;CL:1001318,2.54e-07,2;CL:0002173,2.54e-07,2;CL:0002681,9.65e-07,12;CL:0002584,9.65e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.00e-11;10!UBERON:0009773;5.00e-11;10!UBERON:0001231;5.00e-11;10!UBERON:0004810;5.00e-11;10!UBERON:0006555;8.81e-10;15!UBERON:0004819;8.81e-10;15!UBERON:0001285;8.81e-10;15!UBERON:0007684;8.81e-10;15!UBERON:0003567;2.13e-07;2!UBERON:0003838;2.13e-07;2!UBERON:0003586;2.13e-07;2!UBERON:0005169;2.13e-07;2!UBERON:0002321;2.13e-07;2!UBERON:0005215;2.13e-07;2!UBERON:0002303;2.13e-07;2!UBERON:0002319;2.13e-07;2!UBERON:0000353;2.64e-07;15!UBERON:0006554;2.84e-07;30!UBERON:0001008;2.84e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.41e-11,10;UBERON:0004211,6.59e-10,15;UBERON:0009773,6.59e-10,15;UBERON:0001231,6.59e-10,15;UBERON:0001285,6.59e-10,15;UBERON:0007684,6.59e-10,15;UBERON:0004208,6.59e-10,15;UBERON:0006555,3.19e-09,16;UBERON:0004819,3.19e-09,16;UBERON:0000353,1.96e-07,15;UBERON:0003567,2.54e-07,2;UBERON:0003838,2.54e-07,2;UBERON:0003586,2.54e-07,2;UBERON:0005169,2.54e-07,2;UBERON:0002321,2.54e-07,2;UBERON:0005215,2.54e-07,2;UBERON:0002303,2.54e-07,2;UBERON:0002319,2.54e-07,2;UBERON:0001225,9.65e-07,12;UBERON:0008987,9.65e-07,12 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.26858963686374,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.873765488520689,1.05506791291381,0.495065411840187,0,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0.286235987131057,0.273748850145768,0.502170558379211,1.91033514369878,1.55991119954897,1.65292640758726,0,0,0.464448369948228,0,0,0,0.309868802321207,0.142169232487422,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0,0,0.575384784644301,0,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0,1.83650335422542,0,0,1.31940520074686,0.398927315243264,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0,1.05627643155971,0,0,0.44931452458598,0.300353785683013,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0,0,0.946895611469467,0,0.334231370655521,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.520237390239513,0.328875809207352,0.552700035571697,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,1.34140171940727,0.639312809217652,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,1.10864698731282,0.263504357079378,0.0654895377488563,1.82147644146271,0.741568885568859,1.29818957461873,1.0447784237956,0.26591592103773,0,0,0,0.198762407366705,0,0.694281003215189,0,0,1.92582629358047,0.208994966536811,0.775250277507987,1.06729878806013,0,0,0.760272105718513,0.488124115096339,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.633152558322899,0.264818361626438,0.286836620748814,0.709336764396714,0,2.1349799145941,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.61246251376468,0.491337269247072,0,0,0.494533858557114,0,5.03032699271367,0.505008341862199,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0.453728732640084,0.179389635688862,1.49490172172997,1.27159140695737,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0.337552664482532,0.0974370051611986,0,0.552299391853796,0,0,0,0.508681776931463,0.773043412653187,0.818238361772504,0.286804595389004,0.365921118388786,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,5.14592750554308,0,1.39310378409594,0.721879481669586,0.236613600079688,0,0.964044119533928,0.441175890929576,0.435758888184812,0.474541238222193,0.808987848960987,0.392442930250692,0,0,1.40241773803446,1.2347220339942,0,0,0,0.590789906681404,0,0.245976877086227,1.3725424823882,0.768251997860379,0,0.502644862058154,0.185176890317059,0,0,0,0.231860809950154,0.352226082707465,0.433099343283221,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0.425325291727159,0.179117045405697,0,0,0,0.264145302039678,0,0,0,0.317489471460845,0.763976851116555,0,1.71072446022705,0,0.600686115687835,0.285826432630578,0.224262168690721,0,1.1734125731352,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,1.0656887160644,1.14382394926518,0,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0,0,0,1.2937654491571,0,0.254094624222463,0,0,0.837581326671744,0,0,8.97484377612075,0.828831026872071,0.24538298343828,0.500170521059677,0,0.831883446123229,0.713715955188647,0.788512075169673,0.234282829985426,0,0,1.03473071292505,1.32845119707087,0.368738337083406,0.347534457872331,0.195801157462741,0,0.206768026122887,0.862856803274467,0.426910231213777,0.909382714338778,0,0.604780586659361,2.72918588600655,0.920771839728375,1.68396056659844,1.02511319404561,0,0.482561763430822,0,1.23367755042124,0.177561725313127,0.574890092096664,1.03850885836724,0,0.120859449591622,1.20303882181971,0.0920809889358963,0.574072240823034,1.27463817604702,0.131124414959424,1.35359883872224,0.462092022626489,1.56869953835371,0,1.16106791782163,0,0,0.431831832204279,6.16909010761157,1.08378575017541,1.50506932156456,0.254876273045038,0,1.56712328305525,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.457847324091717,0.330037999682352,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0,0.107420244868274,0.580066775656914,0.426133137080504,0.356128142586949,0.661139661443912,0.192190067365106,0,0,0,0,0,2.15623506123262,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0.632758849437452,0.190630193923825,1.27948895655667,0,0,0,0.719489830333259,0.274537029736055,0.117812402345686,0.808729926293264,0,0,1.46290121726877,0.487426979262569,0,0.136499911407986,0.707027159768564,1.13008116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| |||
|short_description=p@chr11:1823998..1824003,- | |||
}} |
Revision as of 16:59, 10 September 2013
Short description: | p@chr11:1823998..1824003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:1823998..1824003, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.41e-11 | 10 |
nephron tubule epithelial cell | 3.41e-11 | 10 |
epithelial cell of nephron | 6.59e-10 | 15 |
kidney cell | 1.28e-08 | 17 |
kidney epithelial cell | 1.28e-08 | 17 |
mesangial cell | 2.54e-07 | 2 |
kidney interstitial cell | 2.54e-07 | 2 |
juxtaglomerular complex cell | 2.54e-07 | 2 |
renal interstitial pericyte | 2.54e-07 | 2 |
extraglomerular mesangial cell | 2.54e-07 | 2 |
kidney cortical cell | 9.65e-07 | 12 |
renal cortical epithelial cell | 9.65e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.41e-11 | 10 |
nephron epithelium | 6.59e-10 | 15 |
renal tubule | 6.59e-10 | 15 |
nephron tubule | 6.59e-10 | 15 |
nephron | 6.59e-10 | 15 |
uriniferous tubule | 6.59e-10 | 15 |
nephrogenic mesenchyme | 6.59e-10 | 15 |
excretory tube | 3.19e-09 | 16 |
kidney epithelium | 3.19e-09 | 16 |
parenchyma | 1.96e-07 | 15 |
abdomen connective tissue | 2.54e-07 | 2 |
abdominal segment connective tissue | 2.54e-07 | 2 |
trunk connective tissue | 2.54e-07 | 2 |
interstitial tissue | 2.54e-07 | 2 |
extraglomerular mesangium | 2.54e-07 | 2 |
kidney interstitium | 2.54e-07 | 2 |
juxtaglomerular apparatus | 2.54e-07 | 2 |
mesangium | 2.54e-07 | 2 |
cortex of kidney | 9.65e-07 | 12 |
renal parenchyma | 9.65e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.