FFCP PHASE1:Hg19::chr11:46405204..46405243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2134|description=CAGE_peak_at_chr11:46405204..46405243,-|id=chr11:46405204..46405243,-|ontology_enrichment_celltype=CL:0002321!1.10e-15!248;CL:0000220!5.70e-15!246;CL:0000066!5.73e-13!254;CL:0000222!3.90e-10!119;CL:0000393!1.17e-09!60;CL:0000211!1.17e-09!60;CL:0000055!5.73e-09!180;CL:0000183!9.43e-09!59;CL:0000548!9.67e-08!679;CL:0000004!9.67e-08!679;CL:0000255!9.67e-08!679;CL:0000012!1.40e-07!682;CL:0000187!2.86e-07!54;CL:0000133!6.82e-07!59;CL:0002319!9.09e-07!25|ontology_enrichment_celltype_v019=CL:0002319;4.09e-08;25!CL:0000128;7.01e-08;7!CL:0000126;7.01e-08;7!CL:0000127;7.01e-08;7!CL:0002322;2.35e-07;5|ontology_enrichment_celltype_v019_2=CL:0002321,7.68e-11,250;CL:0000066,7.18e-10,253;CL:0002319,5.74e-08,25;CL:0000128,6.42e-08,7;CL:0000126,6.42e-08,7;CL:0000127,6.42e-08,7;CL:0002453,6.42e-08,7;CL:0000133,8.77e-08,59;CL:0002322,3.64e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000490!7.23e-10!138;UBERON:0005256!6.91e-09!143;UBERON:0000481!1.81e-07!347;UBERON:0000483!2.59e-07!309;UBERON:0000119!2.68e-07!312|ontology_enrichment_uberon_v019=UBERON:0007625;3.04e-09;11|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.24e-09,11;UBERON:0003104,7.44e-08,160;UBERON:0009142,7.44e-08,160|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,1.22866968250754,1.39560233594486,0.873765488520689,0.263766978228454,0.495065411840187,0,0,0.602694528023977,0,1.46379839637152,1.47745269692145,3.26401105990805,3.44800193625897,4.00730381983479,1.50561867580173,4.14290710662849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.68280343881454,1.2786256184353,0.722878304769133,0,0.869079113764942,0,0.486634870302636,2.55244006342983,1.99556457716308,2.98638271356629,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,2.51699661725944,0.825354125820202,0,0.775250277507987,0.35576626268671,0.33472061276467,1.61131726843659,0,5.85748938115607,0.367663080345869,7.29127753093584,0.714397826272638,0.22452937262617,0.112611480483322,0,0,0.732806975721629,0,0,0.872188104285069,0.993943903390637,0.25326102332916,0,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0.368502951935304,0,0,1.97813543422845,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,0.30648779579902,2.40380894250555,1.13432183160021,0,0,0.635795703478686,0.900273288253207,0.206105058476878,0,0,0,0.292311015483596,0,0.920498986422993,0.161646056818812,1.77504796258307,0.503760491138201,0.508681776931463,0,0,0,2.07355300420312,1.32529768321485,2.09149097165133,2.90250954043037,1.26160425437814,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,3.2925920906512,8.82052268313252,0,0,0,0,0.491953754172454,1.54411029268673,0,0,0,0,0.977424915930974,0,0,3.13012093432707,1.29149563659404,3.89789408954899,4.62985512576611,1.33177906564219,0,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.775630294546667,0,0,0.26593811658487,4.16029747645464,1.54324424557285,2.83698264046557,0.266422179016099,1.42977993658148,4.34097284313154,1.64648067356154,0.325736184293735,1.42156779497018,6.33561498346743,1.20575750823834,0.871533458600294,0.199945982364114,0,0,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0.773288812777695,1.00509759200609,3.18969375826582,0,0,0,1.10422342547226,3.00102312635806,1.35632511849868,0.831883446123229,0,0,0,0,0,0,1.32845119707087,0.921845842708516,0.347534457872331,0.979005787313703,0.343143423810856,0,0,0,1.5156378572313,4.99306318531491,8.16453791990137,0.248107807818777,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.246381468041427,0,0.464841513839837,2.41718899183244,0,0.368323955743585,0.34444334449382,0.364182336013434,1.70461739447251,1.35359883872224,1.00119938235739,5.49044838423799,0,0.633309773357254,1.13733384070897,0.850468526382578,0,3.08454505380579,1.35473218771926,2.50844886927427,0,0,1.79099803777743,0,0,3.84675187674584,0.984043937099117,1.30151357865721,0,0.457847324091717,0.660075999364704,0,0.650060246036521,0,1.25671933779759,0.154048617114644,0.614014698904518,0.413509717453592,0.859361958946189,0.870100163485371,0.852266274161009,0.623224249527161,0.165284915360978,0,0.255225424989168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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2134 | |||
|description=CAGE_peak_at_chr11:46405204..46405243,- | |||
|id=chr11:46405204..46405243,- | |||
|ontology_enrichment_celltype=CL:0002321!1.10e-15!248;CL:0000220!5.70e-15!246;CL:0000066!5.73e-13!254;CL:0000222!3.90e-10!119;CL:0000393!1.17e-09!60;CL:0000211!1.17e-09!60;CL:0000055!5.73e-09!180;CL:0000183!9.43e-09!59;CL:0000548!9.67e-08!679;CL:0000004!9.67e-08!679;CL:0000255!9.67e-08!679;CL:0000012!1.40e-07!682;CL:0000187!2.86e-07!54;CL:0000133!6.82e-07!59;CL:0002319!9.09e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.09e-08;25!CL:0000128;7.01e-08;7!CL:0000126;7.01e-08;7!CL:0000127;7.01e-08;7!CL:0002322;2.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.68e-11,250;CL:0000066,7.18e-10,253;CL:0002319,5.74e-08,25;CL:0000128,6.42e-08,7;CL:0000126,6.42e-08,7;CL:0000127,6.42e-08,7;CL:0002453,6.42e-08,7;CL:0000133,8.77e-08,59;CL:0002322,3.64e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!7.23e-10!138;UBERON:0005256!6.91e-09!143;UBERON:0000481!1.81e-07!347;UBERON:0000483!2.59e-07!309;UBERON:0000119!2.68e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.04e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.24e-09,11;UBERON:0003104,7.44e-08,160;UBERON:0009142,7.44e-08,160 | |||
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| |||
|short_description=p@chr11:46405204..46405243,- | |||
}} |
Revision as of 17:55, 10 September 2013
Short description: | p@chr11:46405204..46405243, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:46405204..46405243, - |
Coexpression cluster: | C2134_normal_liposarcoma_bronchial_small_Placental_endometrial_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.68e-11 | 250 |
epithelial cell | 7.18e-10 | 253 |
neural cell | 5.74e-08 | 25 |
oligodendrocyte | 6.42e-08 | 7 |
macroglial cell | 6.42e-08 | 7 |
astrocyte | 6.42e-08 | 7 |
oligodendrocyte precursor cell | 6.42e-08 | 7 |
neurectodermal cell | 8.77e-08 | 59 |
embryonic stem cell | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.24e-09 | 11 |
mesenchyme | 7.44e-08 | 160 |
entire embryonic mesenchyme | 7.44e-08 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.