FFCP PHASE1:Hg19::chr11:60681611..60681706,+: Difference between revisions
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{{FFCP | 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48.2294930381252,22.0117405729234,19.854180919683,41.6420900054379,27.110743942278,49.9325275352352,50.949408418999,47.0431976277315,37.3720713070545,31.5799294387755,42.0421968061805,37.4603653404501,46.4265170967451,43.6473142028545,29.2372022906343,27.9473322377267,34.420615250791,41.4713074710472,27.6524882760219,44.3259946541794,36.5573003682044,44.3489099193081,36.3697318405119,39.6344955486782,54.7559836656623,44.586739534245,85.2059138732517,48.7621901359566,48.4919263822924,15.1421877874381,31.5896521867977,26.5907573304908,38.3661609188861,49.6485976871876,52.0925567228626,61.9183862401363,40.1159004022532,65.7747082452871,50.6546154526813,107.603689881042,91.8270822169554,88.5258389022101,35.1050880465487,51.1236905762174,42.2365339086561,23.642192581946,60.7964163578892,55.1389087300457,37.2929098903325,37.6751326173374,63.4094104584596,11.8334789080831,58.3963195896395,57.5068423051419,116.761756210033,35.7535050747107,119.852973613948,9.51180652492222,23.638935881253,5.88314107996798,16.281546520899,28.3078695340613,14.4156722413458,32.5886457511728,31.8862380152524,30.1163907149375,36.3119196682608,34.3444698705692,13.2487731602106,7.20513673456923,67.7137811886113,51.7554856726908,24.5355639868475,18.420554922326,25.7010513082014,27.0753600797797,10.0828678488687,34.92441249443,21.9606878059317,17.1323304310985,23.5554524402461,47.3058590624439,23.4788606107749,22.874081897767,54.5376396518049,6.21323933454091,52.5138826386965,83.333043810977,26.6250690688646,53.9244667750834,40.3336309501391,95.8065717434066,27.0576637777193,22.6250908471622,16.4026400708908,22.5288608186291,26.3175612304713,10.9394961803644,138.16095724801,82.3710556126228,13.1903433269715,35.3901924561679,8.57122937405259,11.43364655544,44.3084891092741,35.2876396594511,73.8890743454782,37.3358119680725,34.4690898969211,23.5854973429606,30.058157518222,42.0770073546927,64.9591387049684,86.734867599818,12.8834783731122,13.4530638390619,37.4395075408893,126.317640862894,64.9742295526388,104.713137218802,8.53273503356724,34.4074619089651,35.9886623666339,15.2325159298748,35.8483964002054,71.531041902365,30.41542511982,106.266157628609,17.158140105932,20.4512171421978,41.491930918711,24.5144349342134,49.9432280919555,28.666168169323,8.61286824843001,22.2801030306602,22.3109802717553,22.0125804643884,53.179333951536,77.7075668996593,63.1424290976881,18.0133386865821,33.6226810022712,43.7625934061452,19.765564356818,8.6853008228889,22.191538004301,34.4968486742513,36.7180061646648,34.8034799307527,81.1440945005427,7.3059729601504,21.0050059812991,23.4666656258398,36.3483925721724,32.9658602494365,62.7812572105422,61.6217409027398,14.2915852972648,11.7845599479734,14.4686897403434,25.5167546071555,16.0674005414234,75.2316024783447,39.705064532952,41.4939208568076,36.7833961932849,12.6541700198709,31.2125835904086,57.2872327976797,101.216462670281,72.2486358746728,35.5789318034923,29.8295011460889,19.131473652727,39.5716659398889,10.4214788053569,19.2060340027826,35.0990555009325,46.9827928953084,27.8682695362426,14.925049910258,28.3406408661593,81.2421471042737,45.2322419781107,42.37032485242,26.3196788614438,57.2993817786935,70.2028155808159,48.3060081610144,72.7173937975851,60.91752759318,74.7607788461922,60.3900969406335,43.9111670640738,48.5977513607518,32.0182037633146,15.4457825829552,9.25199581697845,70.3922827210363,77.0121098352059,35.806863691785,99.8635161278269,77.087862945363,29.4923012918974|short_description=p1@TMEM109}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79073 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28771 | |||
|TSSclassifier=S | |||
|UniProt=E7ETZ3,F5H679 | |||
|association_with_transcript=0bp_to_ENST00000446886,ENST00000540407_5end | |||
|description=CAGE_peak_1_at_TMEM109_5end | |||
|id=chr11:60681611..60681706,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.82e-15!35;CL:0002078!5.15e-15!44;CL:0000213!4.49e-14!57;CL:0000215!4.49e-14!57;CL:0002139!1.39e-12!24;CL:0000222!7.07e-12!119;CL:0000071!1.83e-10!18;CL:0002546!1.83e-10!18;CL:1000497!4.06e-08!18;CL:0002518!4.06e-08!18;CL:0000057!8.04e-08!75;CL:0002371!1.19e-07!591;CL:1000449!2.50e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.05e-13;36!CL:0002139;1.44e-12;24!CL:0002078;7.33e-11;45!CL:0000071;1.83e-10;18!CL:0000213;5.96e-09;58!CL:0000215;5.96e-09;58!CL:1000497;3.41e-08;17!CL:0002518;3.41e-08;17!CL:1000449;2.06e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.21e-16,36;CL:0002078,1.27e-15,45;CL:0000213,1.23e-14,58;CL:0000215,1.23e-14,58;CL:0002139,1.39e-12,24;CL:0000222,2.26e-12,121;CL:0000071,1.83e-10,18;CL:0002546,1.83e-10,18;CL:1000497,3.31e-08,17;CL:0002518,3.31e-08,17;CL:0000057,1.29e-07,76;CL:1000449,2.04e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;1.83e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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 | |||
|short_description=p1@TMEM109 | |||
}} |
Revision as of 18:20, 10 September 2013
Short description: | p1@TMEM109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM109_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000446886, ENST00000540407_5end |
EntrezGene: | TMEM109 |
HGNC: | 28771 |
UniProt: | E7ETZ3F5H679 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.21e-16 | 36 |
meso-epithelial cell | 1.27e-15 | 45 |
lining cell | 1.23e-14 | 58 |
barrier cell | 1.23e-14 | 58 |
endothelial cell of vascular tree | 1.39e-12 | 24 |
mesodermal cell | 2.26e-12 | 121 |
blood vessel endothelial cell | 1.83e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.83e-10 | 18 |
kidney cell | 3.31e-08 | 17 |
kidney epithelial cell | 3.31e-08 | 17 |
fibroblast | 1.29e-07 | 76 |
epithelial cell of nephron | 2.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.34e-14 | 68 |
vasculature | 6.33e-14 | 78 |
vascular system | 6.33e-14 | 78 |
splanchnic layer of lateral plate mesoderm | 2.16e-12 | 83 |
epithelial tube | 1.35e-11 | 117 |
circulatory system | 1.95e-11 | 112 |
epithelial tube open at both ends | 5.41e-11 | 59 |
blood vessel | 5.41e-11 | 59 |
blood vasculature | 5.41e-11 | 59 |
vascular cord | 5.41e-11 | 59 |
cardiovascular system | 6.15e-11 | 109 |
blood vessel endothelium | 1.83e-10 | 18 |
endothelium | 1.83e-10 | 18 |
cardiovascular system endothelium | 1.83e-10 | 18 |
squamous epithelium | 2.25e-10 | 25 |
simple squamous epithelium | 8.44e-10 | 22 |
excretory tube | 1.74e-07 | 16 |
kidney epithelium | 1.74e-07 | 16 |
nephron epithelium | 2.04e-07 | 15 |
renal tubule | 2.04e-07 | 15 |
nephron tubule | 2.04e-07 | 15 |
nephron | 2.04e-07 | 15 |
uriniferous tubule | 2.04e-07 | 15 |
nephrogenic mesenchyme | 2.04e-07 | 15 |
parenchyma | 3.15e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.