FFCP PHASE1:Hg19::chr12:16760950..16760966,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6643|TSSclassifier=W|UniProt=Q05D86|association_with_transcript=0bp_to_ENST00000541589_5end|coexpression_cluster_id=C10|description=CAGE_peak_23_at_LMO3_5end|id=chr12:16760950..16760966,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;1.45e-11;1!UBERON:0007123;7.85e-09;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!1.02e-41!32;UBERON:0001893!5.98e-39!34;UBERON:0002020!1.20e-38!34;UBERON:0003528!1.20e-38!34;UBERON:0002619!1.56e-37!22;UBERON:0001950!6.15e-37!20;UBERON:0002791!1.31e-36!33;UBERON:0007023!2.60e-34!115;UBERON:0002780!3.03e-34!41;UBERON:0001890!3.03e-34!41;UBERON:0006240!3.03e-34!41;UBERON:0001049!3.75e-34!57;UBERON:0005068!3.75e-34!57;UBERON:0006241!3.75e-34!57;UBERON:0007135!3.75e-34!57;UBERON:0000955!2.20e-33!69;UBERON:0006238!2.20e-33!69;UBERON:0003080!2.75e-33!42;UBERON:0002616!9.70e-33!59;UBERON:0001017!1.18e-32!82;UBERON:0000956!1.29e-32!25;UBERON:0000203!1.29e-32!25;UBERON:0005743!9.94e-31!86;UBERON:0000073!5.52e-27!94;UBERON:0001016!5.52e-27!94;UBERON:0002346!2.56e-25!90;UBERON:0003075!2.61e-23!86;UBERON:0007284!2.61e-23!86;UBERON:0003056!5.28e-21!61;UBERON:0000153!2.62e-20!129;UBERON:0007811!2.62e-20!129;UBERON:0000033!9.42e-18!123;UBERON:0000200!1.80e-17!6;UBERON:0001871!2.26e-17!7;UBERON:0000924!1.67e-13!173;UBERON:0006601!1.67e-13!173;UBERON:0004121!3.81e-12!169;UBERON:0002420!2.18e-11!9;UBERON:0007245!2.18e-11!9;UBERON:0010009!2.18e-11!9;UBERON:0010011!2.18e-11!9;UBERON:0000454!2.18e-11!9;UBERON:0001872!5.92e-10!5;UBERON:0000349!7.79e-10!5;UBERON:0002771!1.91e-09!3;UBERON:0000025!3.27e-08!194;UBERON:0002308!8.34e-08!9;UBERON:0000125!8.34e-08!9;UBERON:0000477!1.01e-07!286;UBERON:0004111!1.81e-07!241;UBERON:0000064!1.90e-07!219;UBERON:0000369!2.56e-07!4;UBERON:0002435!2.56e-07!4;UBERON:0000204!2.56e-07!4;UBERON:0010082!2.56e-07!4;UBERON:0001870!4.35e-07!2;UBERON:0001876!5.67e-07!2;UBERON:0009663!6.03e-07!7|ontology_enrichment_uberon_v019=UBERON:0001950;9.22e-23;20!UBERON:0002619;9.92e-21;22!UBERON:0000956;2.89e-18;25!UBERON:0000203;2.89e-18;25!UBERON:0001869;4.10e-17;32!UBERON:0003528;1.93e-16;34!UBERON:0002020;1.93e-16;34!UBERON:0002791;2.58e-16;32!UBERON:0001893;6.16e-15;34!UBERON:0002171;1.45e-11;1!UBERON:0006518;1.45e-11;1!UBERON:0008949;1.45e-11;1!UBERON:0000101;1.45e-11;1!UBERON:0002167;1.45e-11;1!UBERON:0002581;3.28e-11;1!UBERON:0001882;3.28e-11;1!UBERON:0002022;3.28e-11;1!UBERON:0005403;3.28e-11;1!UBERON:0002780;1.39e-10;41!UBERON:0001890;1.39e-10;41!UBERON:0001872;4.87e-09;5!UBERON:0001017;7.84e-09;75!UBERON:0002046;7.85e-09;5!UBERON:0000955;2.87e-08;68!UBERON:0000073;5.48e-08;53!UBERON:0002616;5.48e-08;53!UBERON:0001016;1.59e-07;83!UBERON:0000200;1.68e-07;6!UBERON:0000922;2.07e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.07e-22,20;UBERON:0002619,1.14e-20,22;UBERON:0002791,2.16e-18,32;UBERON:0001869,2.16e-18,32;UBERON:0000956,3.26e-18,25;UBERON:0000203,3.26e-18,25;UBERON:0003528,2.74e-17,34;UBERON:0002020,2.74e-17,34;UBERON:0001893,2.74e-17,34;UBERON:0002780,2.96e-14,41;UBERON:0001890,2.96e-14,41;UBERON:0003080,2.96e-14,41;UBERON:0006240,2.96e-14,41;UBERON:0000955,7.58e-13,68;UBERON:0006238,7.58e-13,68;UBERON:0002171,1.45e-11,1;UBERON:0006518,1.45e-11,1;UBERON:0008949,1.45e-11,1;UBERON:0000101,1.45e-11,1;UBERON:0002167,1.45e-11,1;UBERON:0002022,3.63e-11,1;UBERON:0002581,4.44e-11,1;UBERON:0001882,5.43e-11,1;UBERON:0005403,5.43e-11,1;UBERON:0000073,7.04e-11,53;UBERON:0002616,7.04e-11,53;UBERON:0001017,1.30e-10,81;UBERON:0001049,2.95e-10,56;UBERON:0005068,2.95e-10,56;UBERON:0006241,2.95e-10,56;UBERON:0007135,2.95e-10,56;UBERON:0001016,1.97e-09,89;UBERON:0003056,2.37e-09,61;UBERON:0001872,5.49e-09,5;UBERON:0002046,7.86e-09,5;UBERON:0004117,7.86e-09,5;UBERON:0007689,7.86e-09,5;UBERON:0007123,7.86e-09,5;UBERON:0003091,7.86e-09,5;UBERON:0011216,1.44e-07,223;UBERON:0000200,1.74e-07,6;UBERON:0003075,9.69e-07,82;UBERON:0007284,9.69e-07,82|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |||
|TSSclassifier=W | |||
|UniProt=Q05D86 | |||
|association_with_transcript=0bp_to_ENST00000541589_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_23_at_LMO3_5end | |||
|id=chr12:16760950..16760966,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.45e-11;1!UBERON:0007123;7.85e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.02e-41!32;UBERON:0001893!5.98e-39!34;UBERON:0002020!1.20e-38!34;UBERON:0003528!1.20e-38!34;UBERON:0002619!1.56e-37!22;UBERON:0001950!6.15e-37!20;UBERON:0002791!1.31e-36!33;UBERON:0007023!2.60e-34!115;UBERON:0002780!3.03e-34!41;UBERON:0001890!3.03e-34!41;UBERON:0006240!3.03e-34!41;UBERON:0001049!3.75e-34!57;UBERON:0005068!3.75e-34!57;UBERON:0006241!3.75e-34!57;UBERON:0007135!3.75e-34!57;UBERON:0000955!2.20e-33!69;UBERON:0006238!2.20e-33!69;UBERON:0003080!2.75e-33!42;UBERON:0002616!9.70e-33!59;UBERON:0001017!1.18e-32!82;UBERON:0000956!1.29e-32!25;UBERON:0000203!1.29e-32!25;UBERON:0005743!9.94e-31!86;UBERON:0000073!5.52e-27!94;UBERON:0001016!5.52e-27!94;UBERON:0002346!2.56e-25!90;UBERON:0003075!2.61e-23!86;UBERON:0007284!2.61e-23!86;UBERON:0003056!5.28e-21!61;UBERON:0000153!2.62e-20!129;UBERON:0007811!2.62e-20!129;UBERON:0000033!9.42e-18!123;UBERON:0000200!1.80e-17!6;UBERON:0001871!2.26e-17!7;UBERON:0000924!1.67e-13!173;UBERON:0006601!1.67e-13!173;UBERON:0004121!3.81e-12!169;UBERON:0002420!2.18e-11!9;UBERON:0007245!2.18e-11!9;UBERON:0010009!2.18e-11!9;UBERON:0010011!2.18e-11!9;UBERON:0000454!2.18e-11!9;UBERON:0001872!5.92e-10!5;UBERON:0000349!7.79e-10!5;UBERON:0002771!1.91e-09!3;UBERON:0000025!3.27e-08!194;UBERON:0002308!8.34e-08!9;UBERON:0000125!8.34e-08!9;UBERON:0000477!1.01e-07!286;UBERON:0004111!1.81e-07!241;UBERON:0000064!1.90e-07!219;UBERON:0000369!2.56e-07!4;UBERON:0002435!2.56e-07!4;UBERON:0000204!2.56e-07!4;UBERON:0010082!2.56e-07!4;UBERON:0001870!4.35e-07!2;UBERON:0001876!5.67e-07!2;UBERON:0009663!6.03e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.22e-23;20!UBERON:0002619;9.92e-21;22!UBERON:0000956;2.89e-18;25!UBERON:0000203;2.89e-18;25!UBERON:0001869;4.10e-17;32!UBERON:0003528;1.93e-16;34!UBERON:0002020;1.93e-16;34!UBERON:0002791;2.58e-16;32!UBERON:0001893;6.16e-15;34!UBERON:0002171;1.45e-11;1!UBERON:0006518;1.45e-11;1!UBERON:0008949;1.45e-11;1!UBERON:0000101;1.45e-11;1!UBERON:0002167;1.45e-11;1!UBERON:0002581;3.28e-11;1!UBERON:0001882;3.28e-11;1!UBERON:0002022;3.28e-11;1!UBERON:0005403;3.28e-11;1!UBERON:0002780;1.39e-10;41!UBERON:0001890;1.39e-10;41!UBERON:0001872;4.87e-09;5!UBERON:0001017;7.84e-09;75!UBERON:0002046;7.85e-09;5!UBERON:0000955;2.87e-08;68!UBERON:0000073;5.48e-08;53!UBERON:0002616;5.48e-08;53!UBERON:0001016;1.59e-07;83!UBERON:0000200;1.68e-07;6!UBERON:0000922;2.07e-07;49 | |||
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|short_description=p23@LMO3 | |||
}} |
Revision as of 22:01, 10 September 2013
Short description: | p23@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_LMO3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000541589_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q05D86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.