FFCP PHASE1:Hg19::chr12:32480585..32480601,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C128|description=CAGE_peak_at_chr12:32480585..32480601,+|id=chr12:32480585..32480601,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;5.54e-16;7!CL:0000586;5.54e-16;7|ontology_enrichment_celltype_v019_2=CL:0000039,5.01e-16,7;CL:0000586,5.01e-16,7|ontology_enrichment_development_v019=UBERON:0009117;2.30e-11;10!UBERON:0005564;2.30e-11;10|ontology_enrichment_disease=DOID:14566!1.69e-09!239;DOID:162!6.60e-09!235;DOID:0050687!1.65e-07!143;DOID:193!9.03e-07!29|ontology_enrichment_disease_v019=DOID:2394;4.59e-08;14!DOID:154;3.92e-07;2!DOID:4236;3.92e-07;2|ontology_enrichment_disease_v019_2=DOID:2394,4.94e-08,14;DOID:154,3.70e-07,2;DOID:4236,3.70e-07,2|ontology_enrichment_uberon=UBERON:0000956!2.87e-08!25;UBERON:0000203!2.87e-08!25;UBERON:0001950!4.83e-08!20;UBERON:0002619!5.47e-08!22|ontology_enrichment_uberon_v019=UBERON:0000473;4.62e-14;8!UBERON:0003135;2.21e-10;11!UBERON:0000991;2.66e-09;21!UBERON:0001897;3.92e-07;2!UBERON:0010225;3.92e-07;2!UBERON:0000922;8.47e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.23e-14,8;UBERON:0003135,2.08e-10,11;UBERON:0000991,2.38e-09,21;UBERON:0009196,2.38e-09,21;UBERON:0009117,2.38e-09,21;UBERON:0005564,2.38e-09,21;UBERON:0004176,6.22e-09,22;UBERON:0001897,3.09e-07,2;UBERON:0010225,3.09e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.302256294682921,0,0,0,0,0.609868530647977,0,0.232387885739037,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09970290300263,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0.213425530045242,0.318852545457645,0,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.852408440419239,0,0,0,0.994147647766298,0.422008249231538,0,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,1.21537496453305,0,0,0,0.663475559587348,0.886642856860642,0.219385397153973,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0.664653872707185,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0.599428828746391,0.576361668616424,0,0.343189995723929,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.2724068122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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_at_chr12:32480585..32480601,+ | |||
|id=chr12:32480585..32480601,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.54e-16;7!CL:0000586;5.54e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.01e-16,7;CL:0000586,5.01e-16,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.30e-11;10!UBERON:0005564;2.30e-11;10 | |||
|ontology_enrichment_disease=DOID:14566!1.69e-09!239;DOID:162!6.60e-09!235;DOID:0050687!1.65e-07!143;DOID:193!9.03e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.59e-08;14!DOID:154;3.92e-07;2!DOID:4236;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.94e-08,14;DOID:154,3.70e-07,2;DOID:4236,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.87e-08!25;UBERON:0000203!2.87e-08!25;UBERON:0001950!4.83e-08!20;UBERON:0002619!5.47e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.62e-14;8!UBERON:0003135;2.21e-10;11!UBERON:0000991;2.66e-09;21!UBERON:0001897;3.92e-07;2!UBERON:0010225;3.92e-07;2!UBERON:0000922;8.47e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.23e-14,8;UBERON:0003135,2.08e-10,11;UBERON:0000991,2.38e-09,21;UBERON:0009196,2.38e-09,21;UBERON:0009117,2.38e-09,21;UBERON:0005564,2.38e-09,21;UBERON:0004176,6.22e-09,22;UBERON:0001897,3.09e-07,2;UBERON:0010225,3.09e-07,2 | |||
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| |||
|short_description=p@chr12:32480585..32480601,+ | |||
}} |
Revision as of 22:29, 10 September 2013
Short description: | p@chr12:32480585..32480601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:32480585..32480601, + |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.01e-16 | 7 |
germ cell | 5.01e-16 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.23e-14 | 8 |
male reproductive organ | 2.08e-10 | 11 |
gonad | 2.38e-09 | 21 |
indifferent external genitalia | 2.38e-09 | 21 |
indifferent gonad | 2.38e-09 | 21 |
gonad primordium | 2.38e-09 | 21 |
external genitalia | 6.22e-09 | 22 |
dorsal plus ventral thalamus | 3.09e-07 | 2 |
thalamic complex | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.94e-08 | 14 |
mixed cell type cancer | 3.70e-07 | 2 |
carcinosarcoma | 3.70e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.