FFCP PHASE1:Hg19::chr12:58159332..58159353,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1594|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2606|TSSclassifier=S|UniProt=F8VWR7|association_with_transcript=114bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end|coexpression_cluster_id=C3310|description=CAGE_peak_3_at_CYP27B1_5end|id=chr12:58159332..58159353,-|ontology_enrichment_celltype=CL:0002076!1.07e-16!43;CL:0000066!1.65e-16!254;CL:0002368!2.94e-16!13;CL:0002159!1.31e-15!13;CL:0000223!4.82e-14!59;CL:0002327!1.07e-09!4;CL:0002202!6.91e-09!9;CL:0002632!6.91e-09!9;CL:0002077!3.12e-08!33;CL:0000068!7.43e-08!3;CL:0000069!7.43e-08!3;CL:0000307!7.43e-08!3;CL:0000377!7.43e-08!3;CL:0002328!1.15e-07!3;CL:0000362!3.70e-07!8;CL:0002621!3.81e-07!3;CL:0002166!5.08e-07!3;CL:0002231!7.62e-07!3|ontology_enrichment_celltype_v019=CL:0002368;6.45e-49;13!CL:0000307;4.03e-25;3!CL:0002202;1.44e-22;9!CL:0002632;1.44e-22;9!CL:0002076;1.59e-20;42!CL:0002327;6.76e-19;4!CL:0000317;5.96e-17;2!CL:1000448;5.96e-17;2!CL:0002308;5.96e-17;2!CL:0002140;5.96e-17;2!CL:0000362;8.14e-15;9!CL:0002159;1.44e-14;14!CL:0000240;6.38e-13;6!CL:0000311;6.38e-13;6!CL:0000079;6.38e-13;6!CL:0000237;6.38e-13;6!CL:0002328;7.11e-12;3!CL:0002336;3.82e-09;1!CL:0002261;3.82e-09;1!CL:0002170;3.82e-09;1!CL:0000244;9.61e-09;4!CL:0000731;9.61e-09;4!CL:0002077;9.01e-08;34!CL:0000312;1.12e-07;5!CL:0000622;2.59e-07;5|ontology_enrichment_celltype_v019_2=CL:0002368,6.11e-49,13;CL:0002076,2.51e-25,42;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002202,1.61e-22,9;CL:0002632,1.61e-22,9;CL:0002327,6.97e-19,4;CL:0000223,8.88e-18,58;CL:0000317,6.47e-17,2;CL:1000448,6.47e-17,2;CL:0002308,6.47e-17,2;CL:0002140,6.47e-17,2;CL:0000362,8.44e-15,9;CL:0000066,1.51e-14,253;CL:0002159,1.55e-14,14;CL:0000240,7.80e-13,6;CL:0000311,7.80e-13,6;CL:0000079,7.80e-13,6;CL:0000237,7.80e-13,6;CL:0000036,7.80e-13,6;CL:0000357,7.80e-13,6;CL:0000114,7.80e-13,6;CL:0002328,7.92e-12,3;CL:0002336,5.72e-09,1;CL:0002261,5.72e-09,1;CL:0002170,5.72e-09,1;CL:0000244,9.25e-09,4;CL:0000731,9.25e-09,4;CL:0002077,3.62e-08,34;CL:0000312,1.12e-07,5;CL:0000622,2.68e-07,5;CL:0002321,4.11e-07,250|ontology_enrichment_development_v019=CL:0000377;4.03e-25;3!CL:0000357;6.38e-13;6!CL:0000114;6.38e-13;6!CL:0000223;4.99e-12;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.88e-10!169;UBERON:0000925!4.88e-10!169;UBERON:0006595!4.88e-10!169;UBERON:0001911!1.07e-09!4;UBERON:0005333!1.07e-09!4;UBERON:0008425!1.07e-09!4;UBERON:0005311!1.07e-09!4;UBERON:0005157!1.13e-09!51;UBERON:0005911!3.24e-09!82;UBERON:0005153!6.30e-09!37;UBERON:0001004!6.92e-09!72;UBERON:0005085!4.06e-08!29;UBERON:0000065!4.79e-08!53;UBERON:0004815!1.15e-07!3;UBERON:0002031!1.15e-07!3;UBERON:0005178!2.72e-07!34;UBERON:0002224!2.72e-07!34;UBERON:0001949!3.81e-07!3;UBERON:0007196!4.92e-07!14;UBERON:0001558!4.92e-07!14;UBERON:0005181!5.36e-07!35|ontology_enrichment_uberon_v019=UBERON:0001911;6.76e-19;4!UBERON:0002419;5.96e-17;2!UBERON:0007771;5.96e-17;2!UBERON:0003297;5.96e-17;2!UBERON:0001821;5.96e-17;2!UBERON:0003487;5.96e-17;2!UBERON:0001820;5.96e-17;2!UBERON:0007196;1.70e-13;15!UBERON:0001558;1.70e-13;15!UBERON:0004815;7.11e-12;3!UBERON:0002031;7.11e-12;3!UBERON:0003126;4.25e-11;7!UBERON:0001005;4.25e-11;7!UBERON:0000065;1.17e-10;44!UBERON:0001003;5.94e-09;15!UBERON:0007376;5.94e-09;15!UBERON:0002185;1.82e-07;5!UBERON:0000365;3.67e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.97e-19,4;UBERON:0005333,6.97e-19,4;UBERON:0008425,6.97e-19,4;UBERON:0005311,6.97e-19,4;UBERON:0002419,6.47e-17,2;UBERON:0007771,6.47e-17,2;UBERON:0003297,6.47e-17,2;UBERON:0001821,6.47e-17,2;UBERON:0003487,6.47e-17,2;UBERON:0001820,6.47e-17,2;UBERON:0005089,6.47e-17,2;UBERON:0005088,6.47e-17,2;UBERON:0007196,1.82e-13,15;UBERON:0001558,1.82e-13,15;UBERON:0004815,7.92e-12,3;UBERON:0002031,7.92e-12,3;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000065,8.45e-11,54;UBERON:0000076,1.03e-09,8;UBERON:0001004,2.76e-09,74;UBERON:0001003,6.07e-09,15;UBERON:0007376,6.07e-09,15;UBERON:0007383,6.07e-09,15;UBERON:0005085,6.23e-09,31;UBERON:0005157,1.10e-07,47;UBERON:0002185,1.95e-07,5;UBERON:0005153,2.09e-07,37;UBERON:0004119,3.38e-07,160;UBERON:0000925,3.38e-07,160;UBERON:0006595,3.38e-07,160;UBERON:0000365,3.56e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,3.0120591877825,3.69754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.57047182154444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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1594 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2606 | |||
|TSSclassifier=S | |||
|UniProt=F8VWR7 | |||
|association_with_transcript=114bp_to_ENST00000546567,ENST00000547451,uc001sqb.1,uc001sqc.1_5end | |||
|coexpression_cluster_id=C3310 | |||
|description=CAGE_peak_3_at_CYP27B1_5end | |||
|id=chr12:58159332..58159353,- | |||
|ontology_enrichment_celltype=CL:0002076!1.07e-16!43;CL:0000066!1.65e-16!254;CL:0002368!2.94e-16!13;CL:0002159!1.31e-15!13;CL:0000223!4.82e-14!59;CL:0002327!1.07e-09!4;CL:0002202!6.91e-09!9;CL:0002632!6.91e-09!9;CL:0002077!3.12e-08!33;CL:0000068!7.43e-08!3;CL:0000069!7.43e-08!3;CL:0000307!7.43e-08!3;CL:0000377!7.43e-08!3;CL:0002328!1.15e-07!3;CL:0000362!3.70e-07!8;CL:0002621!3.81e-07!3;CL:0002166!5.08e-07!3;CL:0002231!7.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.45e-49;13!CL:0000307;4.03e-25;3!CL:0002202;1.44e-22;9!CL:0002632;1.44e-22;9!CL:0002076;1.59e-20;42!CL:0002327;6.76e-19;4!CL:0000317;5.96e-17;2!CL:1000448;5.96e-17;2!CL:0002308;5.96e-17;2!CL:0002140;5.96e-17;2!CL:0000362;8.14e-15;9!CL:0002159;1.44e-14;14!CL:0000240;6.38e-13;6!CL:0000311;6.38e-13;6!CL:0000079;6.38e-13;6!CL:0000237;6.38e-13;6!CL:0002328;7.11e-12;3!CL:0002336;3.82e-09;1!CL:0002261;3.82e-09;1!CL:0002170;3.82e-09;1!CL:0000244;9.61e-09;4!CL:0000731;9.61e-09;4!CL:0002077;9.01e-08;34!CL:0000312;1.12e-07;5!CL:0000622;2.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.11e-49,13;CL:0002076,2.51e-25,42;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002202,1.61e-22,9;CL:0002632,1.61e-22,9;CL:0002327,6.97e-19,4;CL:0000223,8.88e-18,58;CL:0000317,6.47e-17,2;CL:1000448,6.47e-17,2;CL:0002308,6.47e-17,2;CL:0002140,6.47e-17,2;CL:0000362,8.44e-15,9;CL:0000066,1.51e-14,253;CL:0002159,1.55e-14,14;CL:0000240,7.80e-13,6;CL:0000311,7.80e-13,6;CL:0000079,7.80e-13,6;CL:0000237,7.80e-13,6;CL:0000036,7.80e-13,6;CL:0000357,7.80e-13,6;CL:0000114,7.80e-13,6;CL:0002328,7.92e-12,3;CL:0002336,5.72e-09,1;CL:0002261,5.72e-09,1;CL:0002170,5.72e-09,1;CL:0000244,9.25e-09,4;CL:0000731,9.25e-09,4;CL:0002077,3.62e-08,34;CL:0000312,1.12e-07,5;CL:0000622,2.68e-07,5;CL:0002321,4.11e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.03e-25;3!CL:0000357;6.38e-13;6!CL:0000114;6.38e-13;6!CL:0000223;4.99e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.88e-10!169;UBERON:0000925!4.88e-10!169;UBERON:0006595!4.88e-10!169;UBERON:0001911!1.07e-09!4;UBERON:0005333!1.07e-09!4;UBERON:0008425!1.07e-09!4;UBERON:0005311!1.07e-09!4;UBERON:0005157!1.13e-09!51;UBERON:0005911!3.24e-09!82;UBERON:0005153!6.30e-09!37;UBERON:0001004!6.92e-09!72;UBERON:0005085!4.06e-08!29;UBERON:0000065!4.79e-08!53;UBERON:0004815!1.15e-07!3;UBERON:0002031!1.15e-07!3;UBERON:0005178!2.72e-07!34;UBERON:0002224!2.72e-07!34;UBERON:0001949!3.81e-07!3;UBERON:0007196!4.92e-07!14;UBERON:0001558!4.92e-07!14;UBERON:0005181!5.36e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.76e-19;4!UBERON:0002419;5.96e-17;2!UBERON:0007771;5.96e-17;2!UBERON:0003297;5.96e-17;2!UBERON:0001821;5.96e-17;2!UBERON:0003487;5.96e-17;2!UBERON:0001820;5.96e-17;2!UBERON:0007196;1.70e-13;15!UBERON:0001558;1.70e-13;15!UBERON:0004815;7.11e-12;3!UBERON:0002031;7.11e-12;3!UBERON:0003126;4.25e-11;7!UBERON:0001005;4.25e-11;7!UBERON:0000065;1.17e-10;44!UBERON:0001003;5.94e-09;15!UBERON:0007376;5.94e-09;15!UBERON:0002185;1.82e-07;5!UBERON:0000365;3.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.97e-19,4;UBERON:0005333,6.97e-19,4;UBERON:0008425,6.97e-19,4;UBERON:0005311,6.97e-19,4;UBERON:0002419,6.47e-17,2;UBERON:0007771,6.47e-17,2;UBERON:0003297,6.47e-17,2;UBERON:0001821,6.47e-17,2;UBERON:0003487,6.47e-17,2;UBERON:0001820,6.47e-17,2;UBERON:0005089,6.47e-17,2;UBERON:0005088,6.47e-17,2;UBERON:0007196,1.82e-13,15;UBERON:0001558,1.82e-13,15;UBERON:0004815,7.92e-12,3;UBERON:0002031,7.92e-12,3;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000065,8.45e-11,54;UBERON:0000076,1.03e-09,8;UBERON:0001004,2.76e-09,74;UBERON:0001003,6.07e-09,15;UBERON:0007376,6.07e-09,15;UBERON:0007383,6.07e-09,15;UBERON:0005085,6.23e-09,31;UBERON:0005157,1.10e-07,47;UBERON:0002185,1.95e-07,5;UBERON:0005153,2.09e-07,37;UBERON:0004119,3.38e-07,160;UBERON:0000925,3.38e-07,160;UBERON:0006595,3.38e-07,160;UBERON:0000365,3.56e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,3.0120591877825,3.69754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.878002283269004,12.3641928583382,5.2275065654048,1.01847289674383,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.708875486211932,4.11969204433102,2.61570544662566,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,1.93370076765382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.90036147621913,0,0,0,0,0,0,0,0,0,1.65284915360978,4.42037154939744,3.70076866234294,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,3.07910760721639,2.68120910214315,4.3556393944529,0,0.86101074534246,1.68471475667626,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.494411622680279,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0.874599999961957,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,1.65412492502765,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0,0,0.514784993585894,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.656740165994712,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.699397538597222,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0.781514011233092,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CYP27B1 | |||
}} |
Revision as of 23:45, 10 September 2013
Short description: | p3@CYP27B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CYP27B1_5end |
Coexpression cluster: | C3310_Keratinocyte_Bronchial_Corneal_Small_Tracheal_Mammary_Prostate |
Association with transcript: | 114bp_to_ENST00000546567, ENST00000547451, uc001sqb.1, uc001sqc.1_5end |
EntrezGene: | CYP27B1 |
HGNC: | 2606 |
UniProt: | F8VWR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.97e-19 | 4 |
mammary bud | 6.97e-19 | 4 |
mammary ridge | 6.97e-19 | 4 |
mammary placode | 6.97e-19 | 4 |
skin gland | 6.47e-17 | 2 |
epidermis gland | 6.47e-17 | 2 |
gland of integumental system | 6.47e-17 | 2 |
sebaceous gland | 6.47e-17 | 2 |
skin sebaceous gland | 6.47e-17 | 2 |
sweat gland | 6.47e-17 | 2 |
sweat gland placode | 6.47e-17 | 2 |
sebaceous gland placode | 6.47e-17 | 2 |
tracheobronchial tree | 1.82e-13 | 15 |
lower respiratory tract | 1.82e-13 | 15 |
lower respiratory tract epithelium | 7.92e-12 | 3 |
epithelium of bronchus | 7.92e-12 | 3 |
trachea | 4.32e-11 | 7 |
respiratory airway | 4.32e-11 | 7 |
respiratory tract | 8.45e-11 | 54 |
external ectoderm | 1.03e-09 | 8 |
respiratory system | 2.76e-09 | 74 |
skin epidermis | 6.07e-09 | 15 |
outer epithelium | 6.07e-09 | 15 |
enveloping layer of ectoderm | 6.07e-09 | 15 |
ectodermal placode | 6.23e-09 | 31 |
epithelial fold | 1.10e-07 | 47 |
bronchus | 1.95e-07 | 5 |
epithelial bud | 2.09e-07 | 37 |
endoderm-derived structure | 3.38e-07 | 160 |
endoderm | 3.38e-07 | 160 |
presumptive endoderm | 3.38e-07 | 160 |
urothelium | 3.56e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.