FFCP PHASE1:Hg19::chr12:91576561..91576613,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1634|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2705|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000547568,ENST00000552962_5end|coexpression_cluster_id=C3342|description=CAGE_peak_1_at_DCN_5end|id=chr12:91576561..91576613,-|ontology_enrichment_celltype=CL:0000055!2.87e-22!180;CL:0000057!1.64e-16!75;CL:0000680!1.31e-10!57;CL:0000056!1.31e-10!57;CL:0000355!1.31e-10!57;CL:0000183!1.23e-09!59;CL:0000187!1.32e-09!54;CL:0002620!3.60e-08!23;CL:0000393!7.92e-08!60;CL:0000211!7.92e-08!60;CL:0000192!1.61e-07!42;CL:0000514!1.61e-07!42;CL:0000499!9.94e-07!27|ontology_enrichment_celltype_v019=CL:0002620;1.90e-08;23!CL:0000134;1.26e-07;55!CL:0000723;3.06e-07;61!CL:0000057;5.73e-07;73!CL:0000048;8.23e-07;58|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-17,76;CL:0000680,1.92e-11,58;CL:0000056,1.92e-11,58;CL:0000355,1.92e-11,58;CL:0000187,2.18e-10,55;CL:0000393,1.29e-08,61;CL:0000211,1.29e-08,61;CL:0002620,1.89e-08,23;CL:0000192,3.33e-08,43;CL:0000514,3.33e-08,43;CL:0000136,7.17e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!1.96e-16!347;UBERON:0000914!1.12e-15!83;UBERON:0002329!1.12e-15!83;UBERON:0003077!1.12e-15!83;UBERON:0003059!1.12e-15!83;UBERON:0007282!1.12e-15!83;UBERON:0009618!1.12e-15!83;UBERON:0007285!1.12e-15!83;UBERON:0000475!1.17e-15!365;UBERON:0000468!1.29e-14!659;UBERON:0004290!1.96e-13!70;UBERON:0007023!6.60e-13!115;UBERON:0002385!1.05e-12!63;UBERON:0001015!1.05e-12!63;UBERON:0000383!1.05e-12!63;UBERON:0005256!2.07e-12!143;UBERON:0001134!4.92e-12!61;UBERON:0002036!4.92e-12!61;UBERON:0003082!4.92e-12!61;UBERON:0000479!3.18e-11!787;UBERON:0007100!3.40e-11!27;UBERON:0000486!6.25e-11!82;UBERON:0000948!3.33e-10!24;UBERON:0005498!3.33e-10!24;UBERON:0004140!3.33e-10!24;UBERON:0009881!3.33e-10!24;UBERON:0004141!3.33e-10!24;UBERON:0003084!3.33e-10!24;UBERON:0007005!3.33e-10!24;UBERON:0004139!3.33e-10!24;UBERON:0004291!3.33e-10!24;UBERON:0003104!6.93e-10!238;UBERON:0009142!6.93e-10!238;UBERON:0000477!8.30e-10!286;UBERON:0000467!1.75e-09!625;UBERON:0000480!2.72e-09!626;UBERON:0003102!3.39e-09!95;UBERON:0000922!2.30e-08!612;UBERON:0000062!2.84e-08!511;UBERON:0002100!3.68e-08!216;UBERON:0003103!4.19e-08!69;UBERON:0000119!5.04e-08!312;UBERON:0002050!5.75e-08!605;UBERON:0005423!5.75e-08!605;UBERON:0000483!1.09e-07!309;UBERON:0000923!1.17e-07!604;UBERON:0005291!1.17e-07!604;UBERON:0006598!1.17e-07!604;UBERON:0002532!1.17e-07!604;UBERON:0002199!3.98e-07!45;UBERON:0002416!3.98e-07!45;UBERON:0001013!6.30e-07!14;UBERON:0004872!6.81e-07!84|ontology_enrichment_uberon_v019=UBERON:0007100;7.99e-11;25!UBERON:0000948;8.49e-10;22!UBERON:0002385;1.63e-08;31!UBERON:0001015;1.63e-08;31!UBERON:0000383;1.63e-08;31!UBERON:0001013;3.74e-07;14!UBERON:0002384;3.84e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.74e-15,73;UBERON:0003077,1.80e-14,72;UBERON:0007285,1.80e-14,72;UBERON:0002329,2.10e-14,71;UBERON:0003059,2.10e-14,71;UBERON:0007282,2.10e-14,71;UBERON:0004290,2.10e-14,71;UBERON:0009618,2.10e-14,71;UBERON:0000479,7.61e-14,773;UBERON:0002385,1.21e-13,64;UBERON:0001015,1.21e-13,64;UBERON:0000383,1.21e-13,64;UBERON:0003104,2.56e-13,160;UBERON:0009142,2.56e-13,160;UBERON:0007023,2.89e-13,114;UBERON:0001134,6.08e-13,62;UBERON:0002036,6.08e-13,62;UBERON:0003082,6.08e-13,62;UBERON:0007503,1.48e-12,78;UBERON:0007100,1.34e-11,27;UBERON:0000486,3.06e-11,83;UBERON:0005256,6.98e-11,122;UBERON:0000948,1.44e-10,24;UBERON:0005498,1.44e-10,24;UBERON:0004140,1.44e-10,24;UBERON:0009881,1.44e-10,24;UBERON:0004141,1.44e-10,24;UBERON:0003084,1.44e-10,24;UBERON:0007005,1.44e-10,24;UBERON:0004139,1.44e-10,24;UBERON:0004291,1.44e-10,24;UBERON:0003102,4.58e-09,99;UBERON:0010314,1.12e-08,132;UBERON:0000119,1.23e-07,309;UBERON:0002199,1.48e-07,46;UBERON:0002416,1.48e-07,46;UBERON:0003103,1.67e-07,68;UBERON:0000483,2.67e-07,306;UBERON:0002050,2.76e-07,564;UBERON:0000923,2.84e-07,560;UBERON:0010316,2.84e-07,560;UBERON:0005291,2.84e-07,560;UBERON:0006598,2.84e-07,560;UBERON:0010317,2.84e-07,560;UBERON:0002532,2.84e-07,560;UBERON:0001013,3.73e-07,14;UBERON:0005423,7.22e-07,581|phase1_expression=169.6876062387,180.70084216399,111.072070427625,248.181779915763,207.836908908689,191.042136777981,146.91392933762,380.927083676379,367.749364505373,0.245733936501509,0,2.83973783769224,3.4289707169699,263.746098157859,244.239865911474,48.4074105445278,33.1481990413187,40.1670549713055,52.6967422693748,3.20114750999649,1.83600622119828,2.5076377718247,1.71741592278634,0.684372125364421,5.77496142136093,0,0.0821005894499457,0,0,0,34.2143632528528,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1671661790691,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,3.81621501814146,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1634 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2705 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000547568,ENST00000552962_5end | |||
|coexpression_cluster_id=C3342 | |||
|description=CAGE_peak_1_at_DCN_5end | |||
|id=chr12:91576561..91576613,- | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@DCN | |||
}} |
Revision as of 00:56, 11 September 2013
Short description: | p1@DCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DCN_5end |
Coexpression cluster: | C3342_tenocyte_skin_umbilical_Fibroblast_trachea_heart_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000547568, ENST00000552962_5end |
EntrezGene: | DCN |
HGNC: | 2705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-17 | 76 |
muscle precursor cell | 1.92e-11 | 58 |
myoblast | 1.92e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-11 | 58 |
muscle cell | 2.18e-10 | 55 |
electrically responsive cell | 1.29e-08 | 61 |
electrically active cell | 1.29e-08 | 61 |
skin fibroblast | 1.89e-08 | 23 |
smooth muscle cell | 3.33e-08 | 43 |
smooth muscle myoblast | 3.33e-08 | 43 |
fat cell | 7.17e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.