FFCP PHASE1:Hg19::chr12:105863705..105863718,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C381|description=CAGE_peak_at_chr12:105863705..105863718,+|id=chr12:105863705..105863718,+|ontology_enrichment_celltype=CL:0002139!1.12e-74!24;CL:0000071!1.38e-54!18;CL:0002546!1.38e-54!18;CL:0000115!8.15e-54!35;CL:0002078!1.90e-41!44;CL:1000413!1.01e-31!9;CL:0000213!1.72e-30!57;CL:0000215!1.72e-30!57;CL:0000222!3.91e-24!119;CL:0002543!3.65e-22!6;CL:0002544!5.80e-22!6;CL:0005020!2.13e-21!6;CL:0002138!2.13e-21!6;CL:0005022!2.13e-21!6;CL:0000076!1.09e-12!62;CL:0002618!3.99e-12!3;CL:0002545!1.71e-08!2;CL:0002594!2.92e-08!4;CL:0000220!4.43e-08!246;CL:0002321!5.94e-08!248|ontology_enrichment_celltype_v019=CL:0002139;1.69e-117;24!CL:0000071;1.29e-91;18!CL:0000115;1.84e-87;36!CL:1000413;1.84e-69;9!CL:0002544;4.19e-59;6!CL:0002078;1.31e-44;45!CL:0002543;3.74e-42;6!CL:0000213;9.24e-38;58!CL:0000215;9.24e-38;58!CL:0002618;2.66e-31;3!CL:0002138;5.59e-27;6!CL:0002545;5.20e-21;2!CL:0000076;1.90e-17;63!CL:0002188;9.95e-09;5|ontology_enrichment_celltype_v019_2=CL:0002139,1.27e-117,24;CL:0000115,5.01e-97,36;CL:0000071,8.31e-92,18;CL:0002546,8.31e-92,18;CL:0002078,3.56e-77,45;CL:1000413,1.41e-69,9;CL:0000213,2.31e-59,58;CL:0000215,2.31e-59,58;CL:0002544,3.10e-59,6;CL:0002543,2.90e-42,6;CL:0002618,2.66e-31,3;CL:0000222,3.42e-27,121;CL:0005020,6.40e-27,6;CL:0002138,6.40e-27,6;CL:0005022,6.40e-27,6;CL:0000076,6.31e-25,63;CL:0002545,4.70e-21,2;CL:0002321,1.11e-11,250;CL:0000066,1.26e-11,253;CL:0002188,1.21e-08,5|ontology_enrichment_development_v019=CL:0002546;1.29e-91;18!CL:0005022;5.59e-27;6!CL:0000222;2.32e-10;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.38e-54!18;UBERON:0004638!1.38e-54!18;UBERON:0004852!1.38e-54!18;UBERON:0000055!4.14e-51!69;UBERON:0000487!7.94e-44!22;UBERON:0002049!1.67e-43!79;UBERON:0007798!1.67e-43!79;UBERON:0001981!4.68e-39!60;UBERON:0007500!4.68e-39!60;UBERON:0004537!4.68e-39!60;UBERON:0006965!4.68e-39!60;UBERON:0006914!5.12e-38!25;UBERON:0004535!8.62e-35!110;UBERON:0001009!1.29e-33!113;UBERON:0004872!2.97e-32!84;UBERON:0003915!1.01e-31!9;UBERON:0004700!1.01e-31!9;UBERON:0001917!1.01e-31!9;UBERON:0003914!2.09e-29!118;UBERON:0001637!2.17e-25!42;UBERON:0003509!2.17e-25!42;UBERON:0004572!2.17e-25!42;UBERON:0004111!1.66e-16!241;UBERON:0001473!7.23e-16!8;UBERON:0004536!7.23e-16!8;UBERON:0006558!7.23e-16!8;UBERON:0000025!2.95e-15!194;UBERON:0004573!4.52e-15!33;UBERON:0004571!4.52e-15!33;UBERON:0001638!1.61e-14!9;UBERON:0003920!1.61e-14!9;UBERON:0004582!1.61e-14!9;UBERON:0000490!8.76e-13!138;UBERON:0002465!1.52e-12!10;UBERON:0000477!2.56e-12!286;UBERON:0000947!3.65e-12!21;UBERON:0010191!3.65e-12!21;UBERON:0003081!6.52e-12!216;UBERON:0005800!1.71e-08!2;UBERON:0001515!1.71e-08!2;UBERON:0001310!2.92e-08!4;UBERON:0000483!1.40e-07!309;UBERON:0000119!2.01e-07!312;UBERON:0002066!2.07e-07!5|ontology_enrichment_uberon_v019=UBERON:0004638;1.29e-91;18!UBERON:0001986;1.29e-91;18!UBERON:0004852;1.29e-91;18!UBERON:0000487;1.19e-74;22!UBERON:0003915;1.84e-69;9!UBERON:0004700;1.84e-69;9!UBERON:0001917;1.84e-69;9!UBERON:0006914;1.74e-65;25!UBERON:0000490;9.64e-45;33!UBERON:0001638;3.99e-28;9!UBERON:0003920;3.99e-28;9!UBERON:0004582;3.99e-28;9!UBERON:0000055;1.94e-22;65!UBERON:0005800;5.20e-21;2!UBERON:0001515;5.20e-21;2!UBERON:0001473;2.55e-20;8!UBERON:0004536;2.55e-20;8!UBERON:0006558;2.55e-20;8!UBERON:0002066;4.68e-19;5!UBERON:0007500;2.66e-17;56!UBERON:0001981;2.66e-17;56!UBERON:0004537;2.66e-17;56!UBERON:0000947;1.06e-16;21!UBERON:0010191;1.06e-16;21!UBERON:0002049;1.12e-16;75!UBERON:0007798;1.12e-16;75!UBERON:0002465;2.59e-16;10!UBERON:0003914;2.41e-14;74!UBERON:0001637;1.07e-13;42!UBERON:0003509;1.07e-13;42!UBERON:0004572;1.07e-13;42!UBERON:0004573;6.60e-11;33!UBERON:0004571;6.60e-11;33!UBERON:0010260;7.64e-11;9!UBERON:0004535;3.10e-10;109!UBERON:0001009;3.25e-10;112!UBERON:0004111;5.60e-10;130!UBERON:0000025;1.05e-09;93!UBERON:0000483;9.59e-08;136!UBERON:0000119;3.30e-07;139|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.31e-92,18;UBERON:0001986,8.31e-92,18;UBERON:0004852,8.31e-92,18;UBERON:0000487,8.30e-75,22;UBERON:0003915,1.41e-69,9;UBERON:0004700,1.41e-69,9;UBERON:0001917,1.41e-69,9;UBERON:0006914,1.27e-65,25;UBERON:0000055,4.40e-40,68;UBERON:0002049,1.21e-34,78;UBERON:0007798,1.21e-34,78;UBERON:0001638,3.37e-28,9;UBERON:0003920,3.37e-28,9;UBERON:0004582,3.37e-28,9;UBERON:0007500,9.55e-27,59;UBERON:0001981,9.55e-27,59;UBERON:0004537,9.55e-27,59;UBERON:0006965,9.55e-27,59;UBERON:0004535,4.12e-24,109;UBERON:0001009,2.12e-23,112;UBERON:0005800,4.70e-21,2;UBERON:0001515,4.70e-21,2;UBERON:0001473,2.82e-20,8;UBERON:0004536,2.82e-20,8;UBERON:0006558,2.82e-20,8;UBERON:0002066,4.68e-19,5;UBERON:0004872,1.89e-18,83;UBERON:0003914,6.52e-17,117;UBERON:0000947,9.78e-17,21;UBERON:0010191,9.78e-17,21;UBERON:0002465,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr12:105863705..105863718,+ | |||
|id=chr12:105863705..105863718,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.12e-74!24;CL:0000071!1.38e-54!18;CL:0002546!1.38e-54!18;CL:0000115!8.15e-54!35;CL:0002078!1.90e-41!44;CL:1000413!1.01e-31!9;CL:0000213!1.72e-30!57;CL:0000215!1.72e-30!57;CL:0000222!3.91e-24!119;CL:0002543!3.65e-22!6;CL:0002544!5.80e-22!6;CL:0005020!2.13e-21!6;CL:0002138!2.13e-21!6;CL:0005022!2.13e-21!6;CL:0000076!1.09e-12!62;CL:0002618!3.99e-12!3;CL:0002545!1.71e-08!2;CL:0002594!2.92e-08!4;CL:0000220!4.43e-08!246;CL:0002321!5.94e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.69e-117;24!CL:0000071;1.29e-91;18!CL:0000115;1.84e-87;36!CL:1000413;1.84e-69;9!CL:0002544;4.19e-59;6!CL:0002078;1.31e-44;45!CL:0002543;3.74e-42;6!CL:0000213;9.24e-38;58!CL:0000215;9.24e-38;58!CL:0002618;2.66e-31;3!CL:0002138;5.59e-27;6!CL:0002545;5.20e-21;2!CL:0000076;1.90e-17;63!CL:0002188;9.95e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.27e-117,24;CL:0000115,5.01e-97,36;CL:0000071,8.31e-92,18;CL:0002546,8.31e-92,18;CL:0002078,3.56e-77,45;CL:1000413,1.41e-69,9;CL:0000213,2.31e-59,58;CL:0000215,2.31e-59,58;CL:0002544,3.10e-59,6;CL:0002543,2.90e-42,6;CL:0002618,2.66e-31,3;CL:0000222,3.42e-27,121;CL:0005020,6.40e-27,6;CL:0002138,6.40e-27,6;CL:0005022,6.40e-27,6;CL:0000076,6.31e-25,63;CL:0002545,4.70e-21,2;CL:0002321,1.11e-11,250;CL:0000066,1.26e-11,253;CL:0002188,1.21e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.29e-91;18!CL:0005022;5.59e-27;6!CL:0000222;2.32e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.38e-54!18;UBERON:0004638!1.38e-54!18;UBERON:0004852!1.38e-54!18;UBERON:0000055!4.14e-51!69;UBERON:0000487!7.94e-44!22;UBERON:0002049!1.67e-43!79;UBERON:0007798!1.67e-43!79;UBERON:0001981!4.68e-39!60;UBERON:0007500!4.68e-39!60;UBERON:0004537!4.68e-39!60;UBERON:0006965!4.68e-39!60;UBERON:0006914!5.12e-38!25;UBERON:0004535!8.62e-35!110;UBERON:0001009!1.29e-33!113;UBERON:0004872!2.97e-32!84;UBERON:0003915!1.01e-31!9;UBERON:0004700!1.01e-31!9;UBERON:0001917!1.01e-31!9;UBERON:0003914!2.09e-29!118;UBERON:0001637!2.17e-25!42;UBERON:0003509!2.17e-25!42;UBERON:0004572!2.17e-25!42;UBERON:0004111!1.66e-16!241;UBERON:0001473!7.23e-16!8;UBERON:0004536!7.23e-16!8;UBERON:0006558!7.23e-16!8;UBERON:0000025!2.95e-15!194;UBERON:0004573!4.52e-15!33;UBERON:0004571!4.52e-15!33;UBERON:0001638!1.61e-14!9;UBERON:0003920!1.61e-14!9;UBERON:0004582!1.61e-14!9;UBERON:0000490!8.76e-13!138;UBERON:0002465!1.52e-12!10;UBERON:0000477!2.56e-12!286;UBERON:0000947!3.65e-12!21;UBERON:0010191!3.65e-12!21;UBERON:0003081!6.52e-12!216;UBERON:0005800!1.71e-08!2;UBERON:0001515!1.71e-08!2;UBERON:0001310!2.92e-08!4;UBERON:0000483!1.40e-07!309;UBERON:0000119!2.01e-07!312;UBERON:0002066!2.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.29e-91;18!UBERON:0001986;1.29e-91;18!UBERON:0004852;1.29e-91;18!UBERON:0000487;1.19e-74;22!UBERON:0003915;1.84e-69;9!UBERON:0004700;1.84e-69;9!UBERON:0001917;1.84e-69;9!UBERON:0006914;1.74e-65;25!UBERON:0000490;9.64e-45;33!UBERON:0001638;3.99e-28;9!UBERON:0003920;3.99e-28;9!UBERON:0004582;3.99e-28;9!UBERON:0000055;1.94e-22;65!UBERON:0005800;5.20e-21;2!UBERON:0001515;5.20e-21;2!UBERON:0001473;2.55e-20;8!UBERON:0004536;2.55e-20;8!UBERON:0006558;2.55e-20;8!UBERON:0002066;4.68e-19;5!UBERON:0007500;2.66e-17;56!UBERON:0001981;2.66e-17;56!UBERON:0004537;2.66e-17;56!UBERON:0000947;1.06e-16;21!UBERON:0010191;1.06e-16;21!UBERON:0002049;1.12e-16;75!UBERON:0007798;1.12e-16;75!UBERON:0002465;2.59e-16;10!UBERON:0003914;2.41e-14;74!UBERON:0001637;1.07e-13;42!UBERON:0003509;1.07e-13;42!UBERON:0004572;1.07e-13;42!UBERON:0004573;6.60e-11;33!UBERON:0004571;6.60e-11;33!UBERON:0010260;7.64e-11;9!UBERON:0004535;3.10e-10;109!UBERON:0001009;3.25e-10;112!UBERON:0004111;5.60e-10;130!UBERON:0000025;1.05e-09;93!UBERON:0000483;9.59e-08;136!UBERON:0000119;3.30e-07;139 | |||
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|short_description=p@chr12:105863705..105863718,+ | |||
}} |
Revision as of 20:36, 10 September 2013
Short description: | p@chr12:105863705..105863718, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105863705..105863718, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.27e-117 | 24 |
endothelial cell | 5.01e-97 | 36 |
blood vessel endothelial cell | 8.31e-92 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.31e-92 | 18 |
meso-epithelial cell | 3.56e-77 | 45 |
endothelial cell of artery | 1.41e-69 | 9 |
lining cell | 2.31e-59 | 58 |
barrier cell | 2.31e-59 | 58 |
aortic endothelial cell | 3.10e-59 | 6 |
vein endothelial cell | 2.90e-42 | 6 |
endothelial cell of umbilical vein | 2.66e-31 | 3 |
mesodermal cell | 3.42e-27 | 121 |
lymphangioblast | 6.40e-27 | 6 |
endothelial cell of lymphatic vessel | 6.40e-27 | 6 |
vascular lymphangioblast | 6.40e-27 | 6 |
squamous epithelial cell | 6.31e-25 | 63 |
thoracic aorta endothelial cell | 4.70e-21 | 2 |
embryonic cell | 1.11e-11 | 250 |
epithelial cell | 1.26e-11 | 253 |
glomerular endothelial cell | 1.21e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.