FFCP PHASE1:Hg19::chr13:99948360..99948387,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1880|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=3128|TSSclassifier=S|UniProt=|association_with_transcript=11bp_to_AB464515,CU676694,DQ891368,DQ894548_5end|coexpression_cluster_id=C537|description=CAGE_peak_5_at_GPR183_5end|id=chr13:99948360..99948387,-|ontology_enrichment_celltype=CL:0000738!5.77e-64!140;CL:0000037!2.07e-54!172;CL:0000566!2.07e-54!172;CL:0002031!3.54e-52!124;CL:0002087!1.88e-50!119;CL:0000988!5.98e-50!182;CL:0002032!7.22e-50!165;CL:0000837!7.22e-50!165;CL:0000557!1.56e-46!71;CL:0000766!4.67e-46!76;CL:0002009!7.84e-45!65;CL:0002057!6.97e-44!42;CL:0000839!1.23e-42!70;CL:0002194!9.25e-42!63;CL:0000576!9.25e-42!63;CL:0000040!9.25e-42!63;CL:0000559!9.25e-42!63;CL:0000860!4.22e-40!45;CL:0000763!4.82e-40!112;CL:0000049!4.82e-40!112;CL:0000134!4.78e-14!358;CL:0002320!2.56e-13!365;CL:0000219!8.71e-11!390;CL:0000451!8.96e-11!10;CL:0000838!1.69e-09!52;CL:0000542!3.32e-09!53;CL:0000051!3.32e-09!53;CL:0000453!2.44e-08!5;CL:0000791!2.65e-08!18;CL:0000789!2.65e-08!18;CL:0002420!2.65e-08!18;CL:0002419!2.65e-08!18;CL:0000790!2.65e-08!18;CL:0000048!2.99e-08!430;CL:0000990!3.17e-08!8;CL:0000723!7.75e-08!436;CL:0000034!1.05e-07!444|ontology_enrichment_celltype_v019=CL:0000860;5.08e-54;33!CL:0002057;5.08e-54;33!CL:0000473;1.42e-44;39!CL:0000234;1.42e-44;39!CL:0000576;3.15e-33;48!CL:0000766;4.97e-33;69!CL:0000763;2.10e-13;100!CL:0001014;5.77e-12;2!CL:0001016;5.77e-12;2!CL:0000738;1.84e-11;136!CL:0002087;3.84e-11;104!CL:0000097;6.33e-10;5!CL:0000840;1.81e-08;5!CL:0000451;8.28e-08;10!CL:0000784;1.09e-07;3!CL:0000219;3.51e-07;193|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-65,67;CL:0002009,2.38e-58,61;CL:0000839,1.72e-57,66;CL:0000766,2.60e-56,72;CL:0000473,2.06e-55,48;CL:0000234,2.06e-55,48;CL:0000860,1.80e-53,42;CL:0002057,1.80e-53,42;CL:0002194,2.54e-51,59;CL:0000576,2.54e-51,59;CL:0000040,2.54e-51,59;CL:0000559,2.54e-51,59;CL:0002031,1.83e-47,120;CL:0000738,1.28e-46,136;CL:0000763,2.14e-41,108;CL:0000049,2.14e-41,108;CL:0000037,1.87e-36,168;CL:0002032,5.61e-36,161;CL:0000837,5.61e-36,161;CL:0002087,2.73e-35,115;CL:0000988,2.97e-34,177;CL:0000134,1.48e-13,354;CL:0002320,3.76e-13,361;CL:0001014,5.64e-12,2;CL:0001016,5.64e-12,2;CL:0000219,1.01e-11,386;CL:0000048,5.67e-10,427;CL:0000097,7.16e-10,5;CL:0002028,7.16e-10,5;CL:0000723,9.89e-10,433;CL:0000034,2.03e-09,441;CL:0000840,1.36e-08,5;CL:0001029,1.36e-08,5;CL:0000451,6.64e-08,10;CL:0000784,7.28e-08,3|ontology_enrichment_development_v019=CL:0002057;8.57e-42;42!CL:0000049;5.57e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.76e-42!102;UBERON:0003061!6.76e-42!102;UBERON:0002371!1.92e-39!80;UBERON:0002193!5.66e-38!112;UBERON:0001474!1.51e-35!86;UBERON:0002405!4.56e-32!115;UBERON:0004765!3.91e-29!101;UBERON:0001434!3.91e-29!101;UBERON:0002204!6.66e-13!167;UBERON:0002384!7.74e-13!375;UBERON:0003081!4.09e-11!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-57,76;UBERON:0001474,1.35e-52,82;UBERON:0004765,2.11e-47,90;UBERON:0002405,1.11e-45,93;UBERON:0002390,4.80e-43,98;UBERON:0003061,4.80e-43,98;UBERON:0001434,4.59e-42,100;UBERON:0002193,1.69e-38,108;UBERON:0002204,1.12e-22,167;UBERON:0003081,1.64e-17,203;UBERON:0002384,1.34e-12,371;UBERON:0000926,5.67e-09,315;UBERON:0004120,5.67e-09,315;UBERON:0006603,5.67e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.401088894940283,1.08505435357926,1.34349284543955,0.971680998056939,0.515151135268373,1.01778767145695,3.02300754951048,0.970336244751265,1.85943229524548,2.05583944010913,3.09706370895104,1.43846196161075,1.2808035326455,0.945928919554341,1.72372840368309,2.5819387343353,5.41705946377367,2.25890807451126,0.818718450173537,0.674170453335254,4.89734227793444,6.09765151444578,9.59005688698562,0.329851300186716,1.59570926097305,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,1.7587406567972,2.08593167368081,1.3031330682307,0,0.736555271975129,1.26584954976354,0,0,0.209658645508376,0.112328631146495,0.750884464207532,0.16072558669708,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,1.32208974556972,0,0,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0.786839080455332,0.393010762749165,0.822405995998037,0,0,0.946895611469467,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0.512365278902701,0,0.164437904603676,0,0.289803085735052,0.444859689486181,0.535081656179426,0,0.113309342697566,0.766440987203842,1.03088233644789,0.759059076058509,1.27426165729639,0,0,0.602300476311091,0.127986611154418,1.24930726552346,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,1.90792499444274,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3128 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_AB464515,CU676694,DQ891368,DQ894548_5end | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_5_at_GPR183_5end | |||
|id=chr13:99948360..99948387,- | |||
|ontology_enrichment_celltype=CL:0000738!5.77e-64!140;CL:0000037!2.07e-54!172;CL:0000566!2.07e-54!172;CL:0002031!3.54e-52!124;CL:0002087!1.88e-50!119;CL:0000988!5.98e-50!182;CL:0002032!7.22e-50!165;CL:0000837!7.22e-50!165;CL:0000557!1.56e-46!71;CL:0000766!4.67e-46!76;CL:0002009!7.84e-45!65;CL:0002057!6.97e-44!42;CL:0000839!1.23e-42!70;CL:0002194!9.25e-42!63;CL:0000576!9.25e-42!63;CL:0000040!9.25e-42!63;CL:0000559!9.25e-42!63;CL:0000860!4.22e-40!45;CL:0000763!4.82e-40!112;CL:0000049!4.82e-40!112;CL:0000134!4.78e-14!358;CL:0002320!2.56e-13!365;CL:0000219!8.71e-11!390;CL:0000451!8.96e-11!10;CL:0000838!1.69e-09!52;CL:0000542!3.32e-09!53;CL:0000051!3.32e-09!53;CL:0000453!2.44e-08!5;CL:0000791!2.65e-08!18;CL:0000789!2.65e-08!18;CL:0002420!2.65e-08!18;CL:0002419!2.65e-08!18;CL:0000790!2.65e-08!18;CL:0000048!2.99e-08!430;CL:0000990!3.17e-08!8;CL:0000723!7.75e-08!436;CL:0000034!1.05e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-54;33!CL:0002057;5.08e-54;33!CL:0000473;1.42e-44;39!CL:0000234;1.42e-44;39!CL:0000576;3.15e-33;48!CL:0000766;4.97e-33;69!CL:0000763;2.10e-13;100!CL:0001014;5.77e-12;2!CL:0001016;5.77e-12;2!CL:0000738;1.84e-11;136!CL:0002087;3.84e-11;104!CL:0000097;6.33e-10;5!CL:0000840;1.81e-08;5!CL:0000451;8.28e-08;10!CL:0000784;1.09e-07;3!CL:0000219;3.51e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.27e-65,67;CL:0002009,2.38e-58,61;CL:0000839,1.72e-57,66;CL:0000766,2.60e-56,72;CL:0000473,2.06e-55,48;CL:0000234,2.06e-55,48;CL:0000860,1.80e-53,42;CL:0002057,1.80e-53,42;CL:0002194,2.54e-51,59;CL:0000576,2.54e-51,59;CL:0000040,2.54e-51,59;CL:0000559,2.54e-51,59;CL:0002031,1.83e-47,120;CL:0000738,1.28e-46,136;CL:0000763,2.14e-41,108;CL:0000049,2.14e-41,108;CL:0000037,1.87e-36,168;CL:0002032,5.61e-36,161;CL:0000837,5.61e-36,161;CL:0002087,2.73e-35,115;CL:0000988,2.97e-34,177;CL:0000134,1.48e-13,354;CL:0002320,3.76e-13,361;CL:0001014,5.64e-12,2;CL:0001016,5.64e-12,2;CL:0000219,1.01e-11,386;CL:0000048,5.67e-10,427;CL:0000097,7.16e-10,5;CL:0002028,7.16e-10,5;CL:0000723,9.89e-10,433;CL:0000034,2.03e-09,441;CL:0000840,1.36e-08,5;CL:0001029,1.36e-08,5;CL:0000451,6.64e-08,10;CL:0000784,7.28e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.57e-42;42!CL:0000049;5.57e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.76e-42!102;UBERON:0003061!6.76e-42!102;UBERON:0002371!1.92e-39!80;UBERON:0002193!5.66e-38!112;UBERON:0001474!1.51e-35!86;UBERON:0002405!4.56e-32!115;UBERON:0004765!3.91e-29!101;UBERON:0001434!3.91e-29!101;UBERON:0002204!6.66e-13!167;UBERON:0002384!7.74e-13!375;UBERON:0003081!4.09e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-57,76;UBERON:0001474,1.35e-52,82;UBERON:0004765,2.11e-47,90;UBERON:0002405,1.11e-45,93;UBERON:0002390,4.80e-43,98;UBERON:0003061,4.80e-43,98;UBERON:0001434,4.59e-42,100;UBERON:0002193,1.69e-38,108;UBERON:0002204,1.12e-22,167;UBERON:0003081,1.64e-17,203;UBERON:0002384,1.34e-12,371;UBERON:0000926,5.67e-09,315;UBERON:0004120,5.67e-09,315;UBERON:0006603,5.67e-09,315 | |||
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|short_description=p5@GPR183 | |||
}} |
Revision as of 03:07, 11 September 2013
Short description: | p5@GPR183 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GPR183_5end |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | 11bp_to_AB464515, CU676694, DQ891368, DQ894548_5end |
EntrezGene: | GPR183 |
HGNC: | 3128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.38e-57 | 76 |
bone element | 1.35e-52 | 82 |
skeletal element | 2.11e-47 | 90 |
immune system | 1.11e-45 | 93 |
hematopoietic system | 4.80e-43 | 98 |
blood island | 4.80e-43 | 98 |
skeletal system | 4.59e-42 | 100 |
hemolymphoid system | 1.69e-38 | 108 |
musculoskeletal system | 1.12e-22 | 167 |
lateral plate mesoderm | 1.64e-17 | 203 |
connective tissue | 1.34e-12 | 371 |
mesoderm | 5.67e-09 | 315 |
mesoderm-derived structure | 5.67e-09 | 315 |
presumptive mesoderm | 5.67e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.