FFCP PHASE1:Hg19::chr15:48009864..48009871,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80031|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16770|TSSclassifier=S|UniProt=|association_with_transcript=210bp_to_ENST00000558816_5end|description=CAGE_peak_11_at_SEMA6D_5end|id=chr15:48009864..48009871,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;3.64e-12;1!UBERON:0005425;9.10e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.99e-32!57;UBERON:0005068!7.99e-32!57;UBERON:0006241!7.99e-32!57;UBERON:0007135!7.99e-32!57;UBERON:0001017!1.41e-28!82;UBERON:0005743!1.65e-27!86;UBERON:0002780!2.95e-26!41;UBERON:0001890!2.95e-26!41;UBERON:0006240!2.95e-26!41;UBERON:0000073!1.23e-25!94;UBERON:0001016!1.23e-25!94;UBERON:0002616!2.09e-25!59;UBERON:0003080!2.43e-25!42;UBERON:0000955!3.59e-25!69;UBERON:0006238!3.59e-25!69;UBERON:0007023!7.63e-24!115;UBERON:0002346!4.12e-23!90;UBERON:0003075!1.18e-21!86;UBERON:0007284!1.18e-21!86;UBERON:0002020!1.82e-20!34;UBERON:0003528!1.82e-20!34;UBERON:0001893!2.83e-20!34;UBERON:0002791!1.11e-19!33;UBERON:0001869!7.41e-19!32;UBERON:0003056!9.84e-16!61;UBERON:0000924!3.90e-15!173;UBERON:0006601!3.90e-15!173;UBERON:0000956!8.53e-15!25;UBERON:0000203!8.53e-15!25;UBERON:0001950!1.04e-14!20;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0002619!3.05e-14!22;UBERON:0004121!5.38e-14!169;UBERON:0000033!1.61e-13!123;UBERON:0000062!4.54e-11!511;UBERON:0000468!1.64e-09!659;UBERON:0000475!5.77e-09!365;UBERON:0000922!1.70e-08!612;UBERON:0000025!4.28e-08!194;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0001894!1.26e-07!7;UBERON:0006222!1.26e-07!7;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0002050!1.63e-07!605;UBERON:0005423!1.63e-07!605;UBERON:0000481!2.64e-07!347;UBERON:0000477!2.91e-07!286;UBERON:0002308!3.58e-07!9;UBERON:0000125!3.58e-07!9;UBERON:0000483!4.20e-07!309;UBERON:0001871!4.20e-07!7;UBERON:0004111!7.35e-07!241;UBERON:0000119!7.84e-07!312;UBERON:0000467!8.80e-07!625|ontology_enrichment_uberon_v019=UBERON:0000941;9.10e-12;1!UBERON:0001785;9.10e-12;1!UBERON:0002464;9.10e-12;1!UBERON:0004904;9.10e-12;1!UBERON:0001021;9.10e-12;1!UBERON:0001950;3.65e-08;20!UBERON:0002619;1.81e-07;22!UBERON:0001871;7.19e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.62e-12,1;UBERON:0001785,5.62e-12,1;UBERON:0002464,5.62e-12,1;UBERON:0004904,5.62e-12,1;UBERON:0001021,5.62e-12,1;UBERON:0003902,5.62e-12,1;UBERON:0005425,5.62e-12,1;UBERON:0001950,4.10e-08,20;UBERON:0002619,2.01e-07,22;UBERON:0001871,6.78e-07,6|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,4.01571269048339,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.421352420106746,0,0.245668634623536,0,1.18800285728205,0,0,0,0.505008341862199,0.750711119231785,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,2.06112432036503,0,0,0,0,0,0.80823028409406,3.19508633264953,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.818999468447914,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.703347082052564,0.222617410045812,0,0,0,0.552567831062295,0,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80031 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=210bp_to_ENST00000558816_5end | |||
|description=CAGE_peak_11_at_SEMA6D_5end | |||
|id=chr15:48009864..48009871,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.64e-12;1!UBERON:0005425;9.10e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.99e-32!57;UBERON:0005068!7.99e-32!57;UBERON:0006241!7.99e-32!57;UBERON:0007135!7.99e-32!57;UBERON:0001017!1.41e-28!82;UBERON:0005743!1.65e-27!86;UBERON:0002780!2.95e-26!41;UBERON:0001890!2.95e-26!41;UBERON:0006240!2.95e-26!41;UBERON:0000073!1.23e-25!94;UBERON:0001016!1.23e-25!94;UBERON:0002616!2.09e-25!59;UBERON:0003080!2.43e-25!42;UBERON:0000955!3.59e-25!69;UBERON:0006238!3.59e-25!69;UBERON:0007023!7.63e-24!115;UBERON:0002346!4.12e-23!90;UBERON:0003075!1.18e-21!86;UBERON:0007284!1.18e-21!86;UBERON:0002020!1.82e-20!34;UBERON:0003528!1.82e-20!34;UBERON:0001893!2.83e-20!34;UBERON:0002791!1.11e-19!33;UBERON:0001869!7.41e-19!32;UBERON:0003056!9.84e-16!61;UBERON:0000924!3.90e-15!173;UBERON:0006601!3.90e-15!173;UBERON:0000956!8.53e-15!25;UBERON:0000203!8.53e-15!25;UBERON:0001950!1.04e-14!20;UBERON:0000153!3.00e-14!129;UBERON:0007811!3.00e-14!129;UBERON:0002619!3.05e-14!22;UBERON:0004121!5.38e-14!169;UBERON:0000033!1.61e-13!123;UBERON:0000062!4.54e-11!511;UBERON:0000468!1.64e-09!659;UBERON:0000475!5.77e-09!365;UBERON:0000922!1.70e-08!612;UBERON:0000025!4.28e-08!194;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0001894!1.26e-07!7;UBERON:0006222!1.26e-07!7;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0002050!1.63e-07!605;UBERON:0005423!1.63e-07!605;UBERON:0000481!2.64e-07!347;UBERON:0000477!2.91e-07!286;UBERON:0002308!3.58e-07!9;UBERON:0000125!3.58e-07!9;UBERON:0000483!4.20e-07!309;UBERON:0001871!4.20e-07!7;UBERON:0004111!7.35e-07!241;UBERON:0000119!7.84e-07!312;UBERON:0000467!8.80e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.10e-12;1!UBERON:0001785;9.10e-12;1!UBERON:0002464;9.10e-12;1!UBERON:0004904;9.10e-12;1!UBERON:0001021;9.10e-12;1!UBERON:0001950;3.65e-08;20!UBERON:0002619;1.81e-07;22!UBERON:0001871;7.19e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.62e-12,1;UBERON:0001785,5.62e-12,1;UBERON:0002464,5.62e-12,1;UBERON:0004904,5.62e-12,1;UBERON:0001021,5.62e-12,1;UBERON:0003902,5.62e-12,1;UBERON:0005425,5.62e-12,1;UBERON:0001950,4.10e-08,20;UBERON:0002619,2.01e-07,22;UBERON:0001871,6.78e-07,6 | |||
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|short_description=p11@SEMA6D | |||
}} |
Revision as of 07:14, 11 September 2013
Short description: | p11@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SEMA6D_5end |
Coexpression cluster: | NA |
Association with transcript: | 210bp_to_ENST00000558816_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.62e-12 | 1 |
cranial nerve | 5.62e-12 | 1 |
nerve trunk | 5.62e-12 | 1 |
nerve connecting eye with brain | 5.62e-12 | 1 |
nerve | 5.62e-12 | 1 |
retinal neural layer | 5.62e-12 | 1 |
presumptive neural retina | 5.62e-12 | 1 |
neocortex | 4.10e-08 | 20 |
regional part of cerebral cortex | 2.01e-07 | 22 |
temporal lobe | 6.78e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.