FFCP PHASE1:Hg19::chr16:24682605..24682610,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:24682605..24682610,+|id=chr16:24682605..24682610,+|ontology_enrichment_celltype=CL:0000243!2.40e-12!15;CL:0000125!2.40e-12!15;CL:0000030!2.40e-12!15;CL:0000339!2.40e-12!15;CL:0000095!9.33e-11!17;CL:0000123!9.33e-11!17;CL:0000333!1.87e-10!41;CL:0000133!1.24e-09!59;CL:0002319!3.59e-08!25;CL:0000188!1.70e-07!9;CL:0000221!3.82e-07!71|ontology_enrichment_celltype_v019=CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000306;1.45e-17;4!CL:0002222;1.45e-17;4!CL:0002224;1.45e-17;4!CL:0000243;1.69e-09;15!CL:0000125;1.69e-09;15!CL:0000095;1.48e-08;17!CL:0000188;2.96e-08;9|ontology_enrichment_celltype_v019_2=CL:0000228,8.72e-18,1;CL:0002372,8.72e-18,1;CL:0000306,1.33e-17,4;CL:0002222,1.33e-17,4;CL:0002224,1.33e-17,4;CL:0000243,1.53e-09,15;CL:0000125,1.53e-09,15;CL:0000030,1.53e-09,15;CL:0000339,1.53e-09,15;CL:0000095,1.35e-08,17;CL:0000123,1.35e-08,17;CL:0000188,3.30e-08,9|ontology_enrichment_development_v019=UBERON:0006238;2.40e-14;10!CL:0000339;1.69e-09;15|ontology_enrichment_disease=DOID:1115!1.51e-09!20;DOID:3093!2.88e-08!11|ontology_enrichment_disease_v019=DOID:3093;3.33e-13;11!DOID:4231;9.87e-10;2!DOID:1907;9.87e-10;2|ontology_enrichment_disease_v019_2=DOID:3093,2.88e-13,11;DOID:4231,9.46e-10,2;DOID:1907,9.46e-10,2|ontology_enrichment_uberon=UBERON:0007625!9.50e-10!11;UBERON:0000488!3.43e-07!4;UBERON:0000013!8.40e-07!5;UBERON:0002410!8.40e-07!5|ontology_enrichment_uberon_v019=UBERON:0010077;1.45e-17;4!UBERON:0005389;1.45e-17;4!UBERON:0000484;1.45e-17;4!UBERON:0000965;1.45e-17;4!UBERON:0001803;1.45e-17;4!UBERON:0007625;5.63e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.33e-17,4;UBERON:0005389,1.33e-17,4;UBERON:0000484,1.33e-17,4;UBERON:0002546,1.33e-17,4;UBERON:0000965,1.33e-17,4;UBERON:0001803,1.33e-17,4;UBERON:0003073,1.33e-17,4;UBERON:0005426,1.33e-17,4;UBERON:0000076,2.77e-09,8;UBERON:0007625,5.47e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657017248110473,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0.689182862422653,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0.694499979733169,0,0,0,0,0.591095237907095,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,4.75664721257649,4.07951100618099,0.917983958726896,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,3.59190574687462,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.553394539744923,1.8747061194316,0,0,0,0,0,0.74627401443437,0,0,1.13641803165053,0.251567901752575,0,0,0.151230923763239,1.08806040407946,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0.363697318405119,0.322231671127465,0,0,1.20008329398946,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,3.97261167496785,0.368211900503681,0,0,0.76736622782191,0.862598491173454,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.475680363110274,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:24682605..24682610,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:24682605..24682610,+ | |||
|id=chr16:24682605..24682610,+ | |||
|ontology_enrichment_celltype=CL:0000243!2.40e-12!15;CL:0000125!2.40e-12!15;CL:0000030!2.40e-12!15;CL:0000339!2.40e-12!15;CL:0000095!9.33e-11!17;CL:0000123!9.33e-11!17;CL:0000333!1.87e-10!41;CL:0000133!1.24e-09!59;CL:0002319!3.59e-08!25;CL:0000188!1.70e-07!9;CL:0000221!3.82e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000306;1.45e-17;4!CL:0002222;1.45e-17;4!CL:0002224;1.45e-17;4!CL:0000243;1.69e-09;15!CL:0000125;1.69e-09;15!CL:0000095;1.48e-08;17!CL:0000188;2.96e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,8.72e-18,1;CL:0002372,8.72e-18,1;CL:0000306,1.33e-17,4;CL:0002222,1.33e-17,4;CL:0002224,1.33e-17,4;CL:0000243,1.53e-09,15;CL:0000125,1.53e-09,15;CL:0000030,1.53e-09,15;CL:0000339,1.53e-09,15;CL:0000095,1.35e-08,17;CL:0000123,1.35e-08,17;CL:0000188,3.30e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.40e-14;10!CL:0000339;1.69e-09;15 | |||
|ontology_enrichment_disease=DOID:1115!1.51e-09!20;DOID:3093!2.88e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;3.33e-13;11!DOID:4231;9.87e-10;2!DOID:1907;9.87e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.88e-13,11;DOID:4231,9.46e-10,2;DOID:1907,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!9.50e-10!11;UBERON:0000488!3.43e-07!4;UBERON:0000013!8.40e-07!5;UBERON:0002410!8.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.45e-17;4!UBERON:0005389;1.45e-17;4!UBERON:0000484;1.45e-17;4!UBERON:0000965;1.45e-17;4!UBERON:0001803;1.45e-17;4!UBERON:0007625;5.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.33e-17,4;UBERON:0005389,1.33e-17,4;UBERON:0000484,1.33e-17,4;UBERON:0002546,1.33e-17,4;UBERON:0000965,1.33e-17,4;UBERON:0001803,1.33e-17,4;UBERON:0003073,1.33e-17,4;UBERON:0005426,1.33e-17,4;UBERON:0000076,2.77e-09,8;UBERON:0007625,5.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657017248110473,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0.689182862422653,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0.694499979733169,0,0,0,0,0.591095237907095,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,4.75664721257649,4.07951100618099,0.917983958726896,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,3.59190574687462,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.553394539744923,1.8747061194316,0,0,0,0,0,0.74627401443437,0,0,1.13641803165053,0.251567901752575,0,0,0.151230923763239,1.08806040407946,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0.406870733204662,0.363697318405119,0.322231671127465,0,0,1.20008329398946,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,3.97261167496785,0.368211900503681,0,0,0.76736622782191,0.862598491173454,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.475680363110274,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:24682605..24682610,+ | |||
}} |
Revision as of 09:46, 11 September 2013
Short description: | p@chr16:24682605..24682610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:24682605..24682610, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 8.72e-18 | 1 |
myotube | 8.72e-18 | 1 |
crystallin accumulating cell | 1.33e-17 | 4 |
vertebrate lens cell | 1.33e-17 | 4 |
lens epithelial cell | 1.33e-17 | 4 |
glial cell (sensu Vertebrata) | 1.53e-09 | 15 |
glial cell | 1.53e-09 | 15 |
glioblast | 1.53e-09 | 15 |
glioblast (sensu Vertebrata) | 1.53e-09 | 15 |
neuron associated cell | 1.35e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.35e-08 | 17 |
cell of skeletal muscle | 3.30e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.33e-17 | 4 |
transparent eye structure | 1.33e-17 | 4 |
simple cuboidal epithelium | 1.33e-17 | 4 |
cranial placode | 1.33e-17 | 4 |
lens of camera-type eye | 1.33e-17 | 4 |
epithelium of lens | 1.33e-17 | 4 |
lens placode | 1.33e-17 | 4 |
lens vesicle | 1.33e-17 | 4 |
external ectoderm | 2.77e-09 | 8 |
pigment epithelium of eye | 5.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.88e-13 | 11 |
histiocytoma | 9.46e-10 | 2 |
malignant fibroxanthoma | 9.46e-10 | 2 |
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