FFCP PHASE1:Hg19::chr16:54320302..54320317,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79191|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14360|TSSclassifier=S|UniProt=P78415|association_with_transcript=60bp_to_NM_024336,uc002eht.1_5end|coexpression_cluster_id=C3569|description=CAGE_peak_10_at_IRX3_5end|id=chr16:54320302..54320317,-|ontology_enrichment_celltype=CL:0000055!2.68e-08!180;CL:0000057!9.24e-07!75|ontology_enrichment_celltype_v019=CL:0002540;6.85e-11;6!CL:0002092;4.17e-09;10!CL:0002567;1.05e-08;3!CL:0002623;1.55e-08;3|ontology_enrichment_celltype_v019_2=CL:0002540,5.07e-11,6;CL:0002092,3.58e-09,10;CL:0002567,6.46e-09,3;CL:0002623,1.61e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.15e-07!95;UBERON:0002097!5.20e-07!40|ontology_enrichment_uberon_v019=UBERON:0002371;7.18e-10;12!UBERON:0001474;5.76e-08;18!UBERON:0001434;1.97e-07;36!UBERON:0001044;4.82e-07;6!UBERON:0003293;4.82e-07;6!UBERON:0003294;4.82e-07;6!UBERON:0010047;4.82e-07;6!UBERON:0003408;4.82e-07;6!UBERON:0000167;4.82e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.39e-07,6;UBERON:0003293,6.39e-07,6;UBERON:0003294,6.39e-07,6;UBERON:0010047,6.39e-07,6;UBERON:0000167,6.39e-07,6|phase1_expression=0.54503513781167,0.856402095563933,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,3.4680117511523,1.88072832886853,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.822189523018381,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,1.00267582127178,0.869079113764942,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0.936480230490962,0,0.298897361103602,0.23486899728753,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.723280468230358,2.37600571456411,1.48360157567134,0,0,0.168336113954066,0,0,1.75591048352335,1.83892677479412,0.901428353439581,0,0.358779271377724,0.85422955527427,0.635795703478686,0.600182192168805,0.515262646192195,1.03056216018252,0.744467425326359,0.506328996723799,0.876933046450788,0.252433774244115,0.460249493211497,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0,0.397589304964456,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.329250856225877,0,0.201057944823262,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,1.33345578013555,1.90994212779139,2.34434894420094,3.4214489204541,0.822619941626588,1.20137223137567,0.857479297891735,0.336393253036082,0,0.1466765716419,0.517086863031111,3.57656445851882,0,0,0,2.57207374262142,1.41849132023278,1.5985330740966,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,1.96967059563885,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,0,0,0,0.117141414992713,1.80567659836631,2.27407504055985,0,0.664225598535437,2.94990669666725,0.347534457872331,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.710246901252508,0.410635780069046,0,0.232420756919918,1.32945394550784,0,0.368323955743585,0,0,0,0,0.15403067420883,2.35304930753057,1.46139224653261,0.633309773357254,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0,0.366277859273374,0.577566499444116,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0,0.534192213880424,0,0.192190067365106,0,0.30347334256665,0.464845549297286,0,0.6970372701606,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0.95460974377781,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.844430541190656,2.63435914367922,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,2.23196781820351,0,0,0,5.51857298466744,0.561594356226918,0.684704037099577,0.313359791546046,0,0,0,1.00899853595524,1.70338495076131,2.40453741329035,3.07240764308458,4.02616994206349,3.8375302593739,0.586164286206121,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0.920418142519393,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14360 | |||
|TSSclassifier=S | |||
|UniProt=P78415 | |||
|association_with_transcript=60bp_to_NM_024336,uc002eht.1_5end | |||
|coexpression_cluster_id=C3569 | |||
|description=CAGE_peak_10_at_IRX3_5end | |||
|id=chr16:54320302..54320317,- | |||
|ontology_enrichment_celltype=CL:0000055!2.68e-08!180;CL:0000057!9.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002540;6.85e-11;6!CL:0002092;4.17e-09;10!CL:0002567;1.05e-08;3!CL:0002623;1.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,5.07e-11,6;CL:0002092,3.58e-09,10;CL:0002567,6.46e-09,3;CL:0002623,1.61e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.15e-07!95;UBERON:0002097!5.20e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;7.18e-10;12!UBERON:0001474;5.76e-08;18!UBERON:0001434;1.97e-07;36!UBERON:0001044;4.82e-07;6!UBERON:0003293;4.82e-07;6!UBERON:0003294;4.82e-07;6!UBERON:0010047;4.82e-07;6!UBERON:0003408;4.82e-07;6!UBERON:0000167;4.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.39e-07,6;UBERON:0003293,6.39e-07,6;UBERON:0003294,6.39e-07,6;UBERON:0010047,6.39e-07,6;UBERON:0000167,6.39e-07,6 | |||
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| |||
|short_description=p10@IRX3 | |||
}} |
Revision as of 10:43, 11 September 2013
Short description: | p10@IRX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_IRX3_5end |
Coexpression cluster: | C3569_acute_seminal_ductus_lung_mesothelioma_mesenchymal_Hepatic |
Association with transcript: | 60bp_to_NM_024336, uc002eht.1_5end |
EntrezGene: | IRX3 |
HGNC: | 14360 |
UniProt: | P78415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 5.07e-11 | 6 |
bone marrow cell | 3.58e-09 | 10 |
light melanocyte | 6.46e-09 | 3 |
acinar cell of salivary gland | 1.61e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.39e-07 | 6 |
gland of oral region | 6.39e-07 | 6 |
gland of foregut | 6.39e-07 | 6 |
oral gland | 6.39e-07 | 6 |
oral cavity | 6.39e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.