FFCP PHASE1:Hg19::chr16:66995187..66995203,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23491|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1865|TSSclassifier=S|UniProt=|association_with_transcript=39bp_to_ENST00000394037_5end|coexpression_cluster_id=C3581|description=CAGE_peak_3_at_CES3_5end|id=chr16:66995187..66995203,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0001045;4.82e-08;1!UBERON:0006298;1.31e-07;1|ontology_enrichment_disease=DOID:162!1.59e-15!235;DOID:14566!9.97e-15!239;DOID:0050686!6.91e-13!137;DOID:2531!4.79e-12!51;DOID:0060083!4.79e-12!51;DOID:305!1.48e-09!106;DOID:1240!7.54e-09!39;DOID:0050687!4.12e-08!143|ontology_enrichment_disease_v019=DOID:2355;1.31e-07;1|ontology_enrichment_disease_v019_2=DOID:2355,1.54e-07,1|ontology_enrichment_uberon=UBERON:0003135!8.96e-08!11;UBERON:0005409!2.72e-07!35|ontology_enrichment_uberon_v019=UBERON:0000160;1.49e-22;17!UBERON:0005409;5.93e-22;22!UBERON:0000059;1.91e-21;11!UBERON:0001155;1.58e-18;9!UBERON:0004921;1.42e-15;33!UBERON:0004907;2.36e-12;5!UBERON:0001007;1.46e-08;81!UBERON:0001154;4.82e-08;1!UBERON:0001153;4.82e-08;1!UBERON:0009854;4.82e-08;1!UBERON:0001736;1.31e-07;1!UBERON:0001052;2.20e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.30e-22,17;UBERON:0000059,1.81e-21,11;UBERON:0005409,2.79e-19,25;UBERON:0001155,1.52e-18,9;UBERON:0004907,2.23e-12,5;UBERON:0004921,2.13e-09,118;UBERON:0001154,4.66e-08,1;UBERON:0001153,4.66e-08,1;UBERON:0001045,4.66e-08,1;UBERON:0001736,1.44e-07,1;UBERON:0006298,1.44e-07,1;UBERON:0001052,2.13e-07,4;UBERON:0001007,4.02e-07,145;UBERON:0001555,4.02e-07,145;UBERON:0007026,4.02e-07,145;UBERON:0009854,5.00e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62681121218633,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,5.07020139287323,1.96565443335525,2.36315962672562,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0.743212700502875,0,0.995985806877798,0.956557636372934,0,0,4.02179807175377,0.324621940274555,2.24637742490767,0.456469358066384,0.313359791546046,7.51903431270201,1.52362600021443,0,0,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0,0,0.270455678475983,0,0,1.12284324244932,0.146508179271894,0.36408156524854,0.334330152832435,0,0,0,0,0,0,0,0,0,0.398495976502139,4.42054264849836,0,0,0.369254416383208,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,2.94133851501273,0.139423744278603,0,0,0,0.179515288819544,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0.498635045700469,0,0,0,0,0,0.210998064528027,0.652931232636591,0.282706142867882,1.51472047819464,9.95261931078505,13.3570922400042,8.55442202907076,0,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,6.16326019599419,0.933193722575224,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0.34945333648406,0,0,0.219267951258557,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0,2.01726584015748,0.114536596165916,0.171594997861965,0,0.49701014226173,0,0,0,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.404421263125109,0.0984274815147488,1.35477331305255,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.472834243795189,0.734364233889974,0,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0,5.12932817873289,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,1.10678907948985,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1865 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000394037_5end | |||
|coexpression_cluster_id=C3581 | |||
|description=CAGE_peak_3_at_CES3_5end | |||
|id=chr16:66995187..66995203,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.82e-08;1!UBERON:0006298;1.31e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.59e-15!235;DOID:14566!9.97e-15!239;DOID:0050686!6.91e-13!137;DOID:2531!4.79e-12!51;DOID:0060083!4.79e-12!51;DOID:305!1.48e-09!106;DOID:1240!7.54e-09!39;DOID:0050687!4.12e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!8.96e-08!11;UBERON:0005409!2.72e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.49e-22;17!UBERON:0005409;5.93e-22;22!UBERON:0000059;1.91e-21;11!UBERON:0001155;1.58e-18;9!UBERON:0004921;1.42e-15;33!UBERON:0004907;2.36e-12;5!UBERON:0001007;1.46e-08;81!UBERON:0001154;4.82e-08;1!UBERON:0001153;4.82e-08;1!UBERON:0009854;4.82e-08;1!UBERON:0001736;1.31e-07;1!UBERON:0001052;2.20e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.30e-22,17;UBERON:0000059,1.81e-21,11;UBERON:0005409,2.79e-19,25;UBERON:0001155,1.52e-18,9;UBERON:0004907,2.23e-12,5;UBERON:0004921,2.13e-09,118;UBERON:0001154,4.66e-08,1;UBERON:0001153,4.66e-08,1;UBERON:0001045,4.66e-08,1;UBERON:0001736,1.44e-07,1;UBERON:0006298,1.44e-07,1;UBERON:0001052,2.13e-07,4;UBERON:0001007,4.02e-07,145;UBERON:0001555,4.02e-07,145;UBERON:0007026,4.02e-07,145;UBERON:0009854,5.00e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62681121218633,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,5.07020139287323,1.96565443335525,2.36315962672562,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0.743212700502875,0,0.995985806877798,0.956557636372934,0,0,4.02179807175377,0.324621940274555,2.24637742490767,0.456469358066384,0.313359791546046,7.51903431270201,1.52362600021443,0,0,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0,0,0.270455678475983,0,0,1.12284324244932,0.146508179271894,0.36408156524854,0.334330152832435,0,0,0,0,0,0,0,0,0,0.398495976502139,4.42054264849836,0,0,0.369254416383208,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,2.94133851501273,0.139423744278603,0,0,0,0.179515288819544,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0.498635045700469,0,0,0,0,0,0.210998064528027,0.652931232636591,0.282706142867882,1.51472047819464,9.95261931078505,13.3570922400042,8.55442202907076,0,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,6.16326019599419,0.933193722575224,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0.34945333648406,0,0,0.219267951258557,0,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0,2.01726584015748,0.114536596165916,0.171594997861965,0,0.49701014226173,0,0,0,0.101998217636322,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.404421263125109,0.0984274815147488,1.35477331305255,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.472834243795189,0.734364233889974,0,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0,5.12932817873289,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,1.10678907948985,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0.169732529954025,0,0.991486114072017,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.672567444437648,0,0,0.0887023701626388,0.230467975111559,0,0.203909198930495,0.131545547125698,0.236387681767936,0.111231401892069,0,0,0,3.65263488203798,1.94334832096759,0,0.0714765441766563,0.632054446930906,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0.795803100645473,0,0,0.329821550236287,0.905777061400041,10.5728596607884,0.218559560503957,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,1.37618785021362,0,0,0,0,1.5870805215462,0,0,0,0.126166424835079,0.327796715891087,0,0.101988829741982,0.26721740526556,0,0.50141507858475,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0.653150243690884,0,0,1.00411087549747,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@CES3 | |||
}} |
Revision as of 11:07, 11 September 2013
Short description: | p3@CES3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CES3_5end |
Coexpression cluster: | C3581_colon_small_Hepatocyte_liver_acute_embryonic_appendix |
Association with transcript: | 39bp_to_ENST00000394037_5end |
EntrezGene: | CES3 |
HGNC: | 1865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.30e-22 | 17 |
large intestine | 1.81e-21 | 11 |
gastrointestinal system | 2.79e-19 | 25 |
colon | 1.52e-18 | 9 |
lower digestive tract | 2.23e-12 | 5 |
subdivision of digestive tract | 2.13e-09 | 118 |
vermiform appendix | 4.66e-08 | 1 |
caecum | 4.66e-08 | 1 |
midgut | 4.66e-08 | 1 |
submandibular gland | 1.44e-07 | 1 |
submandibular gland primordium | 1.44e-07 | 1 |
rectum | 2.13e-07 | 4 |
digestive system | 4.02e-07 | 145 |
digestive tract | 4.02e-07 | 145 |
primitive gut | 4.02e-07 | 145 |
digestive tract diverticulum | 5.00e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.54e-07 | 1 |
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