FFCP PHASE1:Hg19::chr17:43319831..43319835,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=48bp_to_AJ008114_5end|description=CAGE_peak_1_at_AJ008114_5end|id=chr17:43319831..43319835,+|ontology_enrichment_celltype=CL:0000988!1.85e-22!182;CL:0000037!6.58e-22!172;CL:0000566!6.58e-22!172;CL:0000738!1.29e-21!140;CL:0002032!4.33e-19!165;CL:0000837!4.33e-19!165;CL:0000542!2.02e-13!53;CL:0000051!2.02e-13!53;CL:0002087!2.54e-13!119;CL:0002031!8.86e-13!124;CL:0000838!1.08e-12!52;CL:0000084!1.27e-09!25;CL:0000827!1.27e-09!25;CL:0000094!9.55e-09!8;CL:0000081!7.02e-08!11;CL:0000763!1.01e-07!112;CL:0000049!1.01e-07!112|ontology_enrichment_celltype_v019=CL:0000775;1.60e-18;3!CL:0000081;1.48e-13;11!CL:0000094;3.11e-12;8!CL:0002127;6.30e-07;1!CL:0000911;6.30e-07;1!CL:0000814;6.30e-07;1|ontology_enrichment_celltype_v019_2=CL:0000775,1.03e-18,3;CL:0000081,1.20e-13,11;CL:0000094,2.48e-12,8;CL:0000988,1.30e-08,177;CL:0002127,5.78e-07,1;CL:0000914,5.78e-07,1;CL:0000911,5.78e-07,1;CL:0000814,5.78e-07,1;CL:0002042,5.78e-07,1;CL:0002039,5.78e-07,1;CL:0002040,5.78e-07,1;CL:0002041,5.78e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!8.91e-09!10|ontology_enrichment_disease_v019=DOID:0060060;6.30e-07;1!DOID:0060061;6.30e-07;1!DOID:8691;6.30e-07;1|ontology_enrichment_disease_v019_2=DOID:0060060,4.57e-07,1;DOID:0060061,4.57e-07,1;DOID:8691,4.57e-07,1|ontology_enrichment_uberon=UBERON:0002390!1.10e-10!102;UBERON:0003061!1.10e-10!102;UBERON:0000178!8.95e-10!15;UBERON:0000179!8.95e-10!15;UBERON:0000463!8.95e-10!15;UBERON:0002193!2.53e-09!112;UBERON:0004177!3.07e-08!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.47e-09;15!UBERON:0000179;1.47e-09;15!UBERON:0000463;1.47e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.30e-09,15;UBERON:0000179,1.30e-09,15;UBERON:0000463,1.30e-09,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.246301768349837,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,1.47187681102573,0.426507697462265,0.880801318004542,1.10799081706375,0,0.434021741431704,0,0,0,0.290796477559129,0,0,0.697287110717054,0,0,0.863077176966451,0.256160706529101,0,0,0,0,0.752969358170419,0.545812300115692,0,0,0,0,0.659702600373432,0,0,0,0.56738522469114,0,0.75374599577023,0,0,0,0,1.89877432464531,0.211255286311942,0,0.419317291016752,1.79725809834392,0.300353785683013,0,0,0.19891667719909,0,0,0,0,1.28019066769952,0.800791974072025,1.14950487990897,0,0,0,0,0,1.32171328579026,2.24203425192614,0.263384084775077,0,0,0,1.33749196312542,0,0,0,2.22820913770347,2.3568472597987,2.21533894583621,0.270803863765016,1.40900451698243,1.1705341280389,2.13769275984779,3.03985019564433,2.31842468588042,0.14828656316206,0,0,3.39928028092699,0.383220493601921,0.68725489096526,0.759059076058509,0.637130828648193,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,7.15312891703765,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,3.74503511973591,8.97484377612075,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0,0.714695326373367,0.411362273086194,1.29694662238543,0,0,0,0,0,0.371606350251437,0,0.497992903438899,0.159426272728822,0,1.34053759092657,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0.333926115068718,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.332423363800313,0,0,0,0,1.11255605286265,0,0.163232808159148,0,0,0,0.0884575645033392,0,5.93042257361244,2.22415090103705,1.67075119208729,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=48bp_to_AJ008114_5end | |||
|description=CAGE_peak_1_at_AJ008114_5end | |||
|id=chr17:43319831..43319835,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.85e-22!182;CL:0000037!6.58e-22!172;CL:0000566!6.58e-22!172;CL:0000738!1.29e-21!140;CL:0002032!4.33e-19!165;CL:0000837!4.33e-19!165;CL:0000542!2.02e-13!53;CL:0000051!2.02e-13!53;CL:0002087!2.54e-13!119;CL:0002031!8.86e-13!124;CL:0000838!1.08e-12!52;CL:0000084!1.27e-09!25;CL:0000827!1.27e-09!25;CL:0000094!9.55e-09!8;CL:0000081!7.02e-08!11;CL:0000763!1.01e-07!112;CL:0000049!1.01e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.60e-18;3!CL:0000081;1.48e-13;11!CL:0000094;3.11e-12;8!CL:0002127;6.30e-07;1!CL:0000911;6.30e-07;1!CL:0000814;6.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.03e-18,3;CL:0000081,1.20e-13,11;CL:0000094,2.48e-12,8;CL:0000988,1.30e-08,177;CL:0002127,5.78e-07,1;CL:0000914,5.78e-07,1;CL:0000911,5.78e-07,1;CL:0000814,5.78e-07,1;CL:0002042,5.78e-07,1;CL:0002039,5.78e-07,1;CL:0002040,5.78e-07,1;CL:0002041,5.78e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!8.91e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;6.30e-07;1!DOID:0060061;6.30e-07;1!DOID:8691;6.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.57e-07,1;DOID:0060061,4.57e-07,1;DOID:8691,4.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-10!102;UBERON:0003061!1.10e-10!102;UBERON:0000178!8.95e-10!15;UBERON:0000179!8.95e-10!15;UBERON:0000463!8.95e-10!15;UBERON:0002193!2.53e-09!112;UBERON:0004177!3.07e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.47e-09;15!UBERON:0000179;1.47e-09;15!UBERON:0000463;1.47e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.30e-09,15;UBERON:0000179,1.30e-09,15;UBERON:0000463,1.30e-09,15 | |||
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|short_description=p1@AJ008114 | |||
}} |
Revision as of 14:04, 11 September 2013
Short description: | p1@AJ008114 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AJ008114_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_AJ008114_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.03e-18 | 3 |
blood cell | 1.20e-13 | 11 |
granulocyte | 2.48e-12 | 8 |
hematopoietic cell | 1.30e-08 | 177 |
innate effector T cell | 5.78e-07 | 1 |
immature NK T cell | 5.78e-07 | 1 |
effector T cell | 5.78e-07 | 1 |
mature NK T cell | 5.78e-07 | 1 |
immature NK T cell stage IV | 5.78e-07 | 1 |
immature NK T cell stage I | 5.78e-07 | 1 |
immature NK T cell stage II | 5.78e-07 | 1 |
immature NK T cell stage III | 5.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.30e-09 | 15 |
haemolymphatic fluid | 1.30e-09 | 15 |
organism substance | 1.30e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.57e-07 | 1 |
cutaneous T cell lymphoma | 4.57e-07 | 1 |
mycosis fungoides | 4.57e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.