FFCP PHASE1:Hg19::chr17:47074758..47074787,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10642|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28866|TSSclassifier=S|UniProt=Q9NZI8,C9JT33|association_with_transcript=0bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end|coexpression_cluster_id=C2417|description=CAGE_peak_3_at_IGF2BP1_5end|id=chr17:47074758..47074787,+|ontology_enrichment_celltype=CL:0000055!4.03e-09!180;CL:0002319!6.73e-09!25;CL:0002321!4.17e-07!248;CL:0000039!8.40e-07!7;CL:0000586!8.40e-07!7|ontology_enrichment_celltype_v019=CL:0000039;1.11e-08;7!CL:0000586;1.11e-08;7!CL:0002322;4.50e-07;5!CL:0002319;6.55e-07;25|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-08,7;CL:0000586,1.13e-08,7;CL:0000066,4.91e-08,253;CL:0002322,4.92e-07,5;CL:0002319,5.76e-07,25|ontology_enrichment_development_v019=UBERON:0009117;1.59e-07;10!UBERON:0005564;1.59e-07;10|ontology_enrichment_disease=DOID:3095!2.50e-12!22;DOID:2994!2.50e-12!22;DOID:0050687!6.69e-12!143;DOID:162!4.39e-10!235;DOID:14566!4.75e-10!239|ontology_enrichment_disease_v019=DOID:3095;4.96e-17;22!DOID:2994;4.96e-17;22!DOID:171;2.02e-07;10|ontology_enrichment_disease_v019_2=DOID:3095,5.13e-17,22;DOID:2994,5.13e-17,22;DOID:0050687,2.61e-15,143;DOID:14566,1.10e-12,239;DOID:162,1.81e-12,235;DOID:305,7.07e-08,106;DOID:171,2.16e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007625;9.47e-07;11!UBERON:0000019;9.63e-07;19!UBERON:0000047;9.63e-07;19!UBERON:0004088;9.63e-07;19!UBERON:0010230;9.63e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0007625,7.87e-07,11|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,2.94880723801811,4.18680700783456,3.27662058195258,4.74780560811216,0.37129905888014,0.331397375727916,0,0.602694528023977,0,1.95173119516203,1.96993692922861,2.04000691244253,0.940364164434263,0.85870796139317,0.821246550437305,2.38531015230125,1.83392173795083,0.985207073399349,1.81034797021462,0,0,0.154816123316076,0,0,0,0.774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,0,0.50133791063589,0,0,0.486634870302636,1.79616152611729,2.66075276955077,2.72287835648691,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,1.37559020970034,1.25396979922086,0.775250277507987,1.42306505074684,0.33472061276467,0,0,0,0,0,2.05389375053383,2.69435247151404,3.26573293401634,4.5994991239765,0.949265659568129,1.83201743930407,0,0,0,1.49091585508596,0,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,2.96001058100592,2.48968828319813,1.61652806483626,0.817309515567294,1.05950199351452,1.15235184896,1.40592859100278,0,0,0.448346041655403,1.17434498643765,0.809364721840658,1.54495887372473,0.204154171254893,1.22834317311768,0.206651562351531,0,0,0,0,0.505008341862199,1.25118519871964,0,0,0,0.150238058906597,1.47461838108027,0.358779271377724,0.640672166455702,0.423863802319124,0.300091096084402,0.412210116953756,0.515281080091258,0.37223371266318,2.36286865137773,0.876933046450788,0,0.828449087780694,0.161646056818812,0,0.906768884048762,0.67824236924195,0,0,0,19.5157929807353,26.77101320094,18.3586429733839,15.1345140322441,14.1299676490352,31.3880528805214,0,0,0,0.464367928031979,0.721879481669586,1.65629520055781,1.51726221070292,2.16909926895134,2.20587945464788,0.871517776369625,1.89816495288877,1.34831308160164,1.37355025587742,1.53898862778556,1.4763109092493,4.20725321410337,0.4115740113314,4.41026134156626,0,0,0,0,7.50229475112993,1.02940686179115,0,0,0,1.29623823221941,3.58389135841357,0,5.77325368101093,1.85488647960123,3.17003474436719,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13049060256185,4.79556075716608,1.68678057388185,1.03417372606222,0,0.845302752556,0.26593811658487,0,1.80045161983499,1.41849132023278,2.1313774321288,0.428933980974443,3.7983512377401,4.11620168390384,0,0,3.16780749173372,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,1.08506009479894,0,0,0,0,0.300946099727719,0,0,1.32845119707087,1.10621501125022,0.347534457872331,1.37060810223918,1.71571711905428,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,0,0.306923946576125,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.616838775210622,0.532685175939381,0.410635780069046,0,0.116210378459959,9.66875596732978,0,0,0,0.182091168006717,0,2.70719767744447,0.924184045252977,6.27479815341484,1.46139224653261,1.26661954671451,3.4120015221269,1.19065593693561,1.29549549661284,1.54227252690289,2.16757150035082,3.01013864312912,0,0,2.91037181138832,0,0,1.28225062558195,3.28014645699706,0.976135183992909,0.515205058238611,0.457847324091717,1.32015199872941,0,0,0,1.45006077438183,0.770243085573222,1.0745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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28866 | |||
|TSSclassifier=S | |||
|UniProt=Q9NZI8,C9JT33 | |||
|association_with_transcript=0bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end | |||
|coexpression_cluster_id=C2417 | |||
|description=CAGE_peak_3_at_IGF2BP1_5end | |||
|id=chr17:47074758..47074787,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.03e-09!180;CL:0002319!6.73e-09!25;CL:0002321!4.17e-07!248;CL:0000039!8.40e-07!7;CL:0000586!8.40e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.11e-08;7!CL:0000586;1.11e-08;7!CL:0002322;4.50e-07;5!CL:0002319;6.55e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-08,7;CL:0000586,1.13e-08,7;CL:0000066,4.91e-08,253;CL:0002322,4.92e-07,5;CL:0002319,5.76e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.59e-07;10!UBERON:0005564;1.59e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!2.50e-12!22;DOID:2994!2.50e-12!22;DOID:0050687!6.69e-12!143;DOID:162!4.39e-10!235;DOID:14566!4.75e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.96e-17;22!DOID:2994;4.96e-17;22!DOID:171;2.02e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.13e-17,22;DOID:2994,5.13e-17,22;DOID:0050687,2.61e-15,143;DOID:14566,1.10e-12,239;DOID:162,1.81e-12,235;DOID:305,7.07e-08,106;DOID:171,2.16e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;9.47e-07;11!UBERON:0000019;9.63e-07;19!UBERON:0000047;9.63e-07;19!UBERON:0004088;9.63e-07;19!UBERON:0010230;9.63e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,7.87e-07,11 | |||
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| |||
|short_description=p3@IGF2BP1 | |||
}} |
Revision as of 14:19, 11 September 2013
Short description: | p3@IGF2BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IGF2BP1_5end |
Coexpression cluster: | C2417_rhabdomyosarcoma_teratocarcinoma_neuroectodermal_neuroepithelioma_colon_medulloblastoma_testic |
Association with transcript: | 0bp_to_ENST00000290341, NM_001160423, NM_006546, uc002iom.2, uc010dbj.2_5end |
EntrezGene: | IGF2BP1 |
HGNC: | 28866 |
UniProt: | Q9NZI8C9JT33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.13e-08 | 7 |
germ cell | 1.13e-08 | 7 |
epithelial cell | 4.91e-08 | 253 |
embryonic stem cell | 4.92e-07 | 5 |
neural cell | 5.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 7.87e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.13e-17 | 22 |
germ cell cancer | 5.13e-17 | 22 |
cell type cancer | 2.61e-15 | 143 |
disease of cellular proliferation | 1.10e-12 | 239 |
cancer | 1.81e-12 | 235 |
carcinoma | 7.07e-08 | 106 |
neuroectodermal tumor | 2.16e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.