FFCP PHASE1:Hg19::chr18:32558380..32558399,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6891|TSSclassifier=W|UniProt=E9PHR3,Q15555|association_with_transcript=172bp_to_ENST00000436190,NM_001143827,uc010xcc.1_5end|description=CAGE_peak_3_at_MAPRE2_5end|id=chr18:32558380..32558399,+|ontology_enrichment_celltype=CL:0000860!5.16e-08!45;CL:0002057!5.91e-08!42;CL:0000557!6.79e-07!71|ontology_enrichment_celltype_v019=CL:0000860;1.24e-11;33!CL:0002057;1.24e-11;33!CL:0000473;2.73e-08;39!CL:0000234;2.73e-08;39|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-09,42;CL:0002057,1.71e-09,42;CL:0000473,7.47e-08,48;CL:0000234,7.47e-08,48|ontology_enrichment_development_v019=UBERON:0006601;1.94e-08;82!UBERON:0004161;3.44e-07;11!CL:0002057;7.30e-07;42|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.52e-24!115;UBERON:0001049!9.99e-20!57;UBERON:0005068!9.99e-20!57;UBERON:0006241!9.99e-20!57;UBERON:0007135!9.99e-20!57;UBERON:0002616!1.23e-16!59;UBERON:0001017!3.40e-16!82;UBERON:0005743!6.27e-16!86;UBERON:0000955!1.10e-15!69;UBERON:0006238!1.10e-15!69;UBERON:0002780!2.31e-15!41;UBERON:0001890!2.31e-15!41;UBERON:0006240!2.31e-15!41;UBERON:0000073!5.36e-15!94;UBERON:0001016!5.36e-15!94;UBERON:0003080!1.02e-14!42;UBERON:0002020!1.62e-14!34;UBERON:0003528!1.62e-14!34;UBERON:0001893!1.74e-14!34;UBERON:0000153!7.02e-14!129;UBERON:0007811!7.02e-14!129;UBERON:0002791!9.86e-14!33;UBERON:0000033!1.10e-13!123;UBERON:0001869!7.72e-13!32;UBERON:0000062!7.35e-12!511;UBERON:0003075!8.43e-12!86;UBERON:0007284!8.43e-12!86;UBERON:0004121!1.72e-11!169;UBERON:0000924!1.08e-10!173;UBERON:0006601!1.08e-10!173;UBERON:0002346!1.40e-10!90;UBERON:0002619!1.76e-10!22;UBERON:0003056!1.15e-09!61;UBERON:0000956!1.89e-09!25;UBERON:0000203!1.89e-09!25;UBERON:0001950!2.22e-09!20;UBERON:0000922!1.39e-08!612;UBERON:0002050!2.54e-08!605;UBERON:0005423!2.54e-08!605;UBERON:0000923!4.47e-08!604;UBERON:0005291!4.47e-08!604;UBERON:0006598!4.47e-08!604;UBERON:0002532!4.47e-08!604;UBERON:0000480!8.75e-08!626;UBERON:0000467!1.63e-07!625;UBERON:0002298!6.86e-07!8;UBERON:0002308!7.10e-07!9;UBERON:0000125!7.10e-07!9|ontology_enrichment_uberon_v019=UBERON:0002298;1.60e-15;6!UBERON:0000073;2.00e-15;53!UBERON:0002616;2.00e-15;53!UBERON:0002780;1.58e-13;41!UBERON:0001890;1.58e-13;41!UBERON:0001893;2.59e-13;34!UBERON:0000125;3.12e-12;9!UBERON:0002308;3.12e-12;9!UBERON:0003528;5.65e-12;34!UBERON:0002020;5.65e-12;34!UBERON:0002791;1.12e-10;32!UBERON:0001869;1.23e-10;32!UBERON:0004732;6.56e-09;13!UBERON:0002420;7.50e-09;9!UBERON:0007245;7.50e-09;9!UBERON:0010009;7.50e-09;9!UBERON:0010011;7.50e-09;9!UBERON:0000454;7.50e-09;9!UBERON:0001017;7.67e-09;75!UBERON:0001950;8.58e-09;20!UBERON:0000988;1.30e-08;3!UBERON:0001896;1.35e-08;3!UBERON:0005290;1.35e-08;3!UBERON:0000955;1.94e-08;68!UBERON:0009663;4.01e-08;7!UBERON:0001016;5.34e-08;83!UBERON:0002619;7.43e-08;22!UBERON:0001872;1.17e-07;5!UBERON:0004733;2.63e-07;12!UBERON:0002028;2.63e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.22e-27,56;UBERON:0005068,2.22e-27,56;UBERON:0006241,2.22e-27,56;UBERON:0007135,2.22e-27,56;UBERON:0000073,1.02e-24,53;UBERON:0002616,1.02e-24,53;UBERON:0001017,4.84e-19,81;UBERON:0000955,7.06e-19,68;UBERON:0006238,7.06e-19,68;UBERON:0002780,1.13e-18,41;UBERON:0001890,1.13e-18,41;UBERON:0003080,1.13e-18,41;UBERON:0006240,1.13e-18,41;UBERON:0007023,1.86e-18,114;UBERON:0001016,9.71e-18,89;UBERON:0003075,1.10e-17,82;UBERON:0007284,1.10e-17,82;UBERON:0002346,1.72e-16,86;UBERON:0002298,1.35e-15,6;UBERON:0003528,8.99e-15,34;UBERON:0002020,8.99e-15,34;UBERON:0001893,1.01e-14,34;UBERON:0010371,1.93e-13,104;UBERON:0003056,3.23e-12,61;UBERON:0000125,3.33e-12,9;UBERON:0002308,3.33e-12,9;UBERON:0002791,7.36e-12,32;UBERON:0001869,8.84e-12,32;UBERON:0011216,1.20e-10,223;UBERON:0003076,5.54e-10,15;UBERON:0003057,5.54e-10,15;UBERON:0000025,1.26e-09,192;UBERON:0004121,4.80e-09,171;UBERON:0000924,4.80e-09,171;UBERON:0006601,4.80e-09,171;UBERON:0004732,5.50e-09,13;UBERON:0010314,6.08e-09,132;UBERON:0002420,7.08e-09,9;UBERON:0007245,7.08e-09,9;UBERON:0010009,7.08e-09,9;UBERON:0010011,7.08e-09,9;UBERON:0000454,7.08e-09,9;UBERON:0001950,7.85e-09,20;UBERON:0000988,1.21e-08,3;UBERON:0001896,1.21e-08,3;UBERON:0005290,1.21e-08,3;UBERON:0010096,1.21e-08,3;UBERON:0009663,4.37e-08,7;UBERON:0002619,6.87e-08,22;UBERON:0001872,1.22e-07,5;UBERON:0004111,1.45e-07,240;UBERON:0004733,2.43e-07,12;UBERON:0002028,2.43e-07,12;UBERON:0007277,2.43e-07,12;UBERON:0000956,9.36e-07,25;UBERON:0000203,9.36e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,1.45398238779565,0,1.21292030593908,1.16214518452842,0.411167888021826,0,0.575384784644301,0.256160706529101,0,14.1345729102014,3.87290810150296,4.06279459783025,0.564727018627814,0.545812300115692,1.12361742222542,14.6920268338033,7.70229664982625,7.6720455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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6891 | |||
|TSSclassifier=W | |||
|UniProt=E9PHR3,Q15555 | |||
|association_with_transcript=172bp_to_ENST00000436190,NM_001143827,uc010xcc.1_5end | |||
|description=CAGE_peak_3_at_MAPRE2_5end | |||
|id=chr18:32558380..32558399,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.16e-08!45;CL:0002057!5.91e-08!42;CL:0000557!6.79e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-11;33!CL:0002057;1.24e-11;33!CL:0000473;2.73e-08;39!CL:0000234;2.73e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-09,42;CL:0002057,1.71e-09,42;CL:0000473,7.47e-08,48;CL:0000234,7.47e-08,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-08;82!UBERON:0004161;3.44e-07;11!CL:0002057;7.30e-07;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@MAPRE2 | |||
}} |
Revision as of 17:18, 11 September 2013
Short description: | p3@MAPRE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MAPRE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_ENST00000436190, NM_001143827, uc010xcc.1_5end |
EntrezGene: | MAPRE2 |
HGNC: | 6891 |
UniProt: | E9PHR3Q15555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.71e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-09 | 42 |
defensive cell | 7.47e-08 | 48 |
phagocyte | 7.47e-08 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.