FFCP PHASE1:Hg19::chr18:67956135..67956144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16833|TSSclassifier=S|UniProt=O14544|association_with_transcript=0bp_to_NM_004232,uc002lkr.1_5end|description=CAGE_peak_4_at_SOCS6_5end|id=chr18:67956135..67956144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;2.08e-15;5!CL:0000163;1.33e-08;9!CL:0000148;4.13e-08;10|ontology_enrichment_celltype_v019_2=CL:0000097,5.24e-15,5;CL:0002028,5.24e-15,5;CL:0000163,2.18e-08,9;CL:0000148,4.59e-08,10;CL:0000541,4.59e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.83e-07!86;UBERON:0007284!1.83e-07!86;UBERON:0000073!2.05e-07!94;UBERON:0001016!2.05e-07!94;UBERON:0002346!4.14e-07!90;UBERON:0000467!4.67e-07!625;UBERON:0000062!5.02e-07!511;UBERON:0004121!6.33e-07!169;UBERON:0000480!6.36e-07!626;UBERON:0005743!8.09e-07!86;UBERON:0000924!9.67e-07!173;UBERON:0006601!9.67e-07!173|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0.369363174230364,0,0,0.572471974262113,1.50561867580173,0.502170558379211,0,0,0,0.393364276848904,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0.447830948479849,0,0.515151135268373,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.973269740605272,0.567208902984407,0,0.614843499851882,0.327447688744282,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0.993943903390637,0.25326102332916,0,0,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0,0.206651562351531,0,0,0,0,0.505008341862199,0,0,0.438977620880838,0,0.901428353439581,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0,0,0,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,0.460249493211497,0.323292113637624,0,0.302256294682921,0,0,0,0.286804595389004,0,0.132529768321485,0.348581828608555,0,0.504641701751257,0.72995471815166,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,2.94848165003288,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0.695582429850461,0.469634776943287,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.268675568108545,0,0.766765358330422,2.95597942737566,0.704387472105808,1.24396869324463,1.00883967391873,1.00993946741104,3.36538839748496,0.381988425558278,2.34434894420094,0,1.23392991243988,0.901029173531752,2.00078502841405,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,2.08014873822732,0,0,0,0.714889968290738,0,0,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0.579125226670317,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.347534457872331,0,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.574890092096664,0,0.232420756919918,0.362578348774867,0.200506470303285,0.828728900423067,0.34444334449382,0.546273504020151,0,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,0.515205058238611,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0,0.460511024178389,0,0.644521469209642,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.706874414074119,0,3.17020642346017,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0.392996164052485,0,0.709522128141196,0.844430541190656,0,0.379473173765715,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16833 | |||
|TSSclassifier=S | |||
|UniProt=O14544 | |||
|association_with_transcript=0bp_to_NM_004232,uc002lkr.1_5end | |||
|description=CAGE_peak_4_at_SOCS6_5end | |||
|id=chr18:67956135..67956144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.08e-15;5!CL:0000163;1.33e-08;9!CL:0000148;4.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.24e-15,5;CL:0002028,5.24e-15,5;CL:0000163,2.18e-08,9;CL:0000148,4.59e-08,10;CL:0000541,4.59e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.83e-07!86;UBERON:0007284!1.83e-07!86;UBERON:0000073!2.05e-07!94;UBERON:0001016!2.05e-07!94;UBERON:0002346!4.14e-07!90;UBERON:0000467!4.67e-07!625;UBERON:0000062!5.02e-07!511;UBERON:0004121!6.33e-07!169;UBERON:0000480!6.36e-07!626;UBERON:0005743!8.09e-07!86;UBERON:0000924!9.67e-07!173;UBERON:0006601!9.67e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@SOCS6 | |||
}} |
Revision as of 18:06, 11 September 2013
Short description: | p4@SOCS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SOCS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004232, uc002lkr.1_5end |
EntrezGene: | SOCS6 |
HGNC: | 16833 |
UniProt: | O14544 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.24e-15 | 5 |
basophil mast progenitor cell | 5.24e-15 | 5 |
endocrine cell | 2.18e-08 | 9 |
melanocyte | 4.59e-08 | 10 |
melanoblast | 4.59e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.