FFCP PHASE1:Hg19::chr19:10450287..10450324,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3385|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5346|TSSclassifier=S|UniProt=P32942|association_with_transcript=20bp_to_ENST00000160262,NM_002162,uc002mob.2,uc010dxd.1,uc010xlf.1_5end|coexpression_cluster_id=C57|description=CAGE_peak_1_at_ICAM3_5end|id=chr19:10450287..10450324,-|ontology_enrichment_celltype=CL:0000037!4.23e-79!172;CL:0000566!4.23e-79!172;CL:0000988!1.39e-76!182;CL:0002032!1.49e-74!165;CL:0000837!1.49e-74!165;CL:0000738!1.29e-68!140;CL:0002031!2.96e-57!124;CL:0002087!1.62e-56!119;CL:0000763!3.36e-41!112;CL:0000049!3.36e-41!112;CL:0000766!2.34e-31!76;CL:0000542!3.09e-29!53;CL:0000051!3.09e-29!53;CL:0000838!7.85e-29!52;CL:0002057!5.05e-28!42;CL:0000557!1.11e-26!71;CL:0000839!6.50e-26!70;CL:0002009!4.83e-25!65;CL:0000860!9.61e-25!45;CL:0002194!4.21e-24!63;CL:0000576!4.21e-24!63;CL:0000040!4.21e-24!63;CL:0000559!4.21e-24!63;CL:0000084!1.19e-15!25;CL:0000827!1.19e-15!25;CL:0000791!5.92e-13!18;CL:0000789!5.92e-13!18;CL:0002420!5.92e-13!18;CL:0002419!5.92e-13!18;CL:0000790!5.92e-13!18;CL:0000945!1.14e-12!24;CL:0000826!1.14e-12!24;CL:0000134!2.37e-12!358;CL:0002320!3.50e-11!365;CL:0000236!2.25e-09!14;CL:0000625!9.24e-09!11;CL:0000219!4.49e-08!390;CL:0000094!8.43e-08!8;CL:0002393!1.93e-07!9;CL:0002397!1.93e-07!9|ontology_enrichment_celltype_v019=CL:0000860;6.91e-23;33!CL:0002057;6.91e-23;33!CL:0000576;2.46e-21;48!CL:0002087;6.59e-21;104!CL:0000542;5.60e-19;53!CL:0000084;6.96e-18;25!CL:0000473;1.93e-17;39!CL:0000234;1.93e-17;39!CL:0000738;2.17e-17;136!CL:0000766;5.26e-17;69!CL:0000988;1.95e-15;177!CL:0000763;5.94e-15;100!CL:0000791;9.39e-15;18!CL:0000789;9.39e-15;18!CL:0002419;9.39e-15;18!CL:0000945;1.64e-14;24!CL:0000236;3.49e-10;13!CL:0000625;6.79e-10;11!CL:0000094;8.75e-09;8!CL:0000219;4.22e-07;193!CL:0000081;9.65e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,5.31e-95,168;CL:0000988,2.95e-91,177;CL:0002032,1.07e-89,161;CL:0000837,1.07e-89,161;CL:0000738,2.01e-83,136;CL:0002031,4.26e-70,120;CL:0002087,2.47e-69,115;CL:0000763,1.82e-50,108;CL:0000049,1.82e-50,108;CL:0000766,1.09e-39,72;CL:0000557,5.05e-34,67;CL:0000542,9.39e-34,53;CL:0000051,9.39e-34,53;CL:0000838,2.76e-33,52;CL:0000839,4.28e-33,66;CL:0000860,3.27e-32,42;CL:0002057,3.27e-32,42;CL:0002009,3.38e-32,61;CL:0002194,4.31e-31,59;CL:0000576,4.31e-31,59;CL:0000040,4.31e-31,59;CL:0000559,4.31e-31,59;CL:0000473,2.51e-29,48;CL:0000234,2.51e-29,48;CL:0000134,1.53e-18,354;CL:0000084,7.16e-18,25;CL:0000827,7.16e-18,25;CL:0002320,2.93e-17,361;CL:0000791,9.50e-15,18;CL:0000789,9.50e-15,18;CL:0002420,9.50e-15,18;CL:0002419,9.50e-15,18;CL:0000790,9.50e-15,18;CL:0000945,1.52e-14,24;CL:0000826,1.52e-14,24;CL:0000219,1.51e-13,386;CL:0000236,1.32e-10,14;CL:0000625,6.77e-10,11;CL:0000034,9.19e-10,441;CL:0000048,4.09e-09,427;CL:0000094,8.72e-09,8;CL:0000723,1.92e-08,433;CL:0002393,2.26e-08,9;CL:0002397,2.26e-08,9;CL:0000081,9.70e-07,11|ontology_enrichment_development_v019=CL:0002057;2.79e-23;42!CL:0000051;5.60e-19;53!CL:0000790;9.39e-15;18!CL:0000049;8.32e-14;108|ontology_enrichment_disease=DOID:2531!3.41e-13!51;DOID:0060083!3.41e-13!51;DOID:1240!2.75e-11!39;DOID:8692!2.36e-08!31|ontology_enrichment_disease_v019=DOID:1240;1.03e-09;39!DOID:2531;2.88e-09;51!DOID:0060083;2.88e-09;51!DOID:8692;6.08e-09;31|ontology_enrichment_disease_v019_2=DOID:2531,4.37e-15,51;DOID:0060083,4.37e-15,51;DOID:1240,1.34e-12,39;DOID:8692,3.20e-09,31|ontology_enrichment_uberon=UBERON:0002390!2.57e-36!102;UBERON:0003061!2.57e-36!102;UBERON:0002193!2.04e-35!112;UBERON:0002371!3.17e-23!80;UBERON:0002405!3.25e-21!115;UBERON:0001474!9.46e-20!86;UBERON:0004765!1.10e-13!101;UBERON:0001434!1.10e-13!101;UBERON:0007023!1.25e-11!115;UBERON:0000178!2.20e-11!15;UBERON:0000179!2.20e-11!15;UBERON:0000463!2.20e-11!15;UBERON:0002384!6.15e-10!375;UBERON:0003081!1.99e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;5.98e-13;15!UBERON:0000179;5.98e-13;15!UBERON:0000463;5.98e-13;15!UBERON:0002390;3.81e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.35e-46,98;UBERON:0003061,7.35e-46,98;UBERON:0002193,5.45e-41,108;UBERON:0002371,3.72e-30,76;UBERON:0002405,9.01e-30,93;UBERON:0001474,3.57e-26,82;UBERON:0004765,9.22e-22,90;UBERON:0001434,2.37e-17,100;UBERON:0002384,6.56e-16,371;UBERON:0000178,6.25e-13,15;UBERON:0000179,6.25e-13,15;UBERON:0000463,6.25e-13,15;UBERON:0003081,4.67e-12,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1276293007894,67.2403827595056,65.8022131782358,165.999724830237,107.856060865317,121.53065680312,0,0,0,0,12.9374001563554,146.213018788754,105.259127621057,106.489101606645,133.244674619533,3.35873211359887,13.2796403067782,2.57575567634187,134.784167348656,91.4459783726919,98.7317129034412,150.381586877978,85.5229207085398,94.1507367521115,178.369283239733,131.1542817429,132.193566507719,157.893521777371,73.5852539285562,112.403983873304,148.523205899115,90.8777479692626,96.8558217958315,173.243483081931,106.227507962187,114.441345518028,157.009218888877,108.10930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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3385 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5346 | |||
|TSSclassifier=S | |||
|UniProt=P32942 | |||
|association_with_transcript=20bp_to_ENST00000160262,NM_002162,uc002mob.2,uc010dxd.1,uc010xlf.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ICAM3_5end | |||
|id=chr19:10450287..10450324,- | |||
|ontology_enrichment_celltype=CL:0000037!4.23e-79!172;CL:0000566!4.23e-79!172;CL:0000988!1.39e-76!182;CL:0002032!1.49e-74!165;CL:0000837!1.49e-74!165;CL:0000738!1.29e-68!140;CL:0002031!2.96e-57!124;CL:0002087!1.62e-56!119;CL:0000763!3.36e-41!112;CL:0000049!3.36e-41!112;CL:0000766!2.34e-31!76;CL:0000542!3.09e-29!53;CL:0000051!3.09e-29!53;CL:0000838!7.85e-29!52;CL:0002057!5.05e-28!42;CL:0000557!1.11e-26!71;CL:0000839!6.50e-26!70;CL:0002009!4.83e-25!65;CL:0000860!9.61e-25!45;CL:0002194!4.21e-24!63;CL:0000576!4.21e-24!63;CL:0000040!4.21e-24!63;CL:0000559!4.21e-24!63;CL:0000084!1.19e-15!25;CL:0000827!1.19e-15!25;CL:0000791!5.92e-13!18;CL:0000789!5.92e-13!18;CL:0002420!5.92e-13!18;CL:0002419!5.92e-13!18;CL:0000790!5.92e-13!18;CL:0000945!1.14e-12!24;CL:0000826!1.14e-12!24;CL:0000134!2.37e-12!358;CL:0002320!3.50e-11!365;CL:0000236!2.25e-09!14;CL:0000625!9.24e-09!11;CL:0000219!4.49e-08!390;CL:0000094!8.43e-08!8;CL:0002393!1.93e-07!9;CL:0002397!1.93e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.91e-23;33!CL:0002057;6.91e-23;33!CL:0000576;2.46e-21;48!CL:0002087;6.59e-21;104!CL:0000542;5.60e-19;53!CL:0000084;6.96e-18;25!CL:0000473;1.93e-17;39!CL:0000234;1.93e-17;39!CL:0000738;2.17e-17;136!CL:0000766;5.26e-17;69!CL:0000988;1.95e-15;177!CL:0000763;5.94e-15;100!CL:0000791;9.39e-15;18!CL:0000789;9.39e-15;18!CL:0002419;9.39e-15;18!CL:0000945;1.64e-14;24!CL:0000236;3.49e-10;13!CL:0000625;6.79e-10;11!CL:0000094;8.75e-09;8!CL:0000219;4.22e-07;193!CL:0000081;9.65e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.31e-95,168;CL:0000988,2.95e-91,177;CL:0002032,1.07e-89,161;CL:0000837,1.07e-89,161;CL:0000738,2.01e-83,136;CL:0002031,4.26e-70,120;CL:0002087,2.47e-69,115;CL:0000763,1.82e-50,108;CL:0000049,1.82e-50,108;CL:0000766,1.09e-39,72;CL:0000557,5.05e-34,67;CL:0000542,9.39e-34,53;CL:0000051,9.39e-34,53;CL:0000838,2.76e-33,52;CL:0000839,4.28e-33,66;CL:0000860,3.27e-32,42;CL:0002057,3.27e-32,42;CL:0002009,3.38e-32,61;CL:0002194,4.31e-31,59;CL:0000576,4.31e-31,59;CL:0000040,4.31e-31,59;CL:0000559,4.31e-31,59;CL:0000473,2.51e-29,48;CL:0000234,2.51e-29,48;CL:0000134,1.53e-18,354;CL:0000084,7.16e-18,25;CL:0000827,7.16e-18,25;CL:0002320,2.93e-17,361;CL:0000791,9.50e-15,18;CL:0000789,9.50e-15,18;CL:0002420,9.50e-15,18;CL:0002419,9.50e-15,18;CL:0000790,9.50e-15,18;CL:0000945,1.52e-14,24;CL:0000826,1.52e-14,24;CL:0000219,1.51e-13,386;CL:0000236,1.32e-10,14;CL:0000625,6.77e-10,11;CL:0000034,9.19e-10,441;CL:0000048,4.09e-09,427;CL:0000094,8.72e-09,8;CL:0000723,1.92e-08,433;CL:0002393,2.26e-08,9;CL:0002397,2.26e-08,9;CL:0000081,9.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-23;42!CL:0000051;5.60e-19;53!CL:0000790;9.39e-15;18!CL:0000049;8.32e-14;108 | |||
|ontology_enrichment_disease=DOID:2531!3.41e-13!51;DOID:0060083!3.41e-13!51;DOID:1240!2.75e-11!39;DOID:8692!2.36e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.03e-09;39!DOID:2531;2.88e-09;51!DOID:0060083;2.88e-09;51!DOID:8692;6.08e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.37e-15,51;DOID:0060083,4.37e-15,51;DOID:1240,1.34e-12,39;DOID:8692,3.20e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.57e-36!102;UBERON:0003061!2.57e-36!102;UBERON:0002193!2.04e-35!112;UBERON:0002371!3.17e-23!80;UBERON:0002405!3.25e-21!115;UBERON:0001474!9.46e-20!86;UBERON:0004765!1.10e-13!101;UBERON:0001434!1.10e-13!101;UBERON:0007023!1.25e-11!115;UBERON:0000178!2.20e-11!15;UBERON:0000179!2.20e-11!15;UBERON:0000463!2.20e-11!15;UBERON:0002384!6.15e-10!375;UBERON:0003081!1.99e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.98e-13;15!UBERON:0000179;5.98e-13;15!UBERON:0000463;5.98e-13;15!UBERON:0002390;3.81e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.35e-46,98;UBERON:0003061,7.35e-46,98;UBERON:0002193,5.45e-41,108;UBERON:0002371,3.72e-30,76;UBERON:0002405,9.01e-30,93;UBERON:0001474,3.57e-26,82;UBERON:0004765,9.22e-22,90;UBERON:0001434,2.37e-17,100;UBERON:0002384,6.56e-16,371;UBERON:0000178,6.25e-13,15;UBERON:0000179,6.25e-13,15;UBERON:0000463,6.25e-13,15;UBERON:0003081,4.67e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1276293007894,67.2403827595056,65.8022131782358,165.999724830237,107.856060865317,121.53065680312,0,0,0,0,12.9374001563554,146.213018788754,105.259127621057,106.489101606645,133.244674619533,3.35873211359887,13.2796403067782,2.57575567634187,134.784167348656,91.4459783726919,98.7317129034412,150.381586877978,85.5229207085398,94.1507367521115,178.369283239733,131.1542817429,132.193566507719,157.893521777371,73.5852539285562,112.403983873304,148.523205899115,90.8777479692626,96.8558217958315,173.243483081931,106.227507962187,114.441345518028,157.009218888877,108.109302430924,99.7365916246504,186.314331199551,99.8597995456406,93.4233373493363,150.497950488789,103.2536178472,121.625753034865,172.53885825051,120.426786967934,131.648353175408,122.316810774614,126.499558479201,104.829322754188,185.117584129424,177.959618017185,119.901287676022,195.803754950238,179.422842833579,169.51233469358,133.757145790605,136.534652815533,158.332647187713,141.67443389208,147.345723229253,135.066823389304,149.396141249379,133.567525634951,91.6432880266212,115.685726306075,78.3660117656719,133.493041864816,92.4839128919535,70.5869347197206,100.125272987941,126.156454842482,128.500936874693,160.833408565832,120.591238654428,140.613998303216,118.844304328826,147.618855372855,157.024948684088,185.866937555658,125.382188923202,178.687391017317,157.241751199893,170.686544978616,194.550412521237,137.946268809885,128.564450261506,98.4550247370144,97.2180371386284,139.143872832611,143.70768510072,180.748036323863,107.280349416269,165.972580862854,155.608945471684,167.279559822914,120.610670381296,115.443923261285,159.911329987003,177.819716285057,128.917095516604,103.625866017512,109.383040075455,105.432166026678,0,0,0,0,0,0,0,0,0,0,0.790513071238134,3.01251873644739,0,0,15.2537275017701,14.6268979331384,20.6084838804241,15.7403812041526,13.7278778587231,11.5151825412165,0,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0.183201743930407,914.556097006279,860.872186409282,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,1.85541675650079,1.39432731443422,0.414644220061482,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,1.96565443335525,1.18157981336281,32.2268062572695,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.492434012174795,1.63802985597466,1.93220510975347,0,0,0,0,0,0,5.41929561685538,17.0813961985659,1.4512968087854,1.58531948758658,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0,0,0,0,0,0,0,0,77.8991750755015,103.047087585608,105.441884106304,104.984603676834,0,0,0,0,0,732.528869420344,771.836564746384,574.379901622345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,99.2486525389859,130.722805696082,95.6278917918861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53084334748864,0.431831832204279,0,0,0.501689773854853,0,0,0,3.50815802633495,6.53588627562251,0,0,0,5.77029665227245,0,0,0,0,0,0,0,0,0,0,0,0.596586391912706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0982349809975,0,0,0,0,0,0.844430541190656,0,0,0,0,2.01090682660736,0,5.64862804660675,0,0,0,0,450.613476998166,434.313933656869,548.570241248719,291.833924935792,401.489578532126,483.112616838574,359.120905763346,563.118875168932,0,0,1.22520107990516,29.728508020115,2.8853842595289,6.18934037131203,20.7254154547469,92.0060902305285,129.266124839348,86.5744953340681,10.7125240290603,140.679386234843,5.934101654863,41.9902120671702,127.823583315934,81.937220455976,16.3799836605774,10.0899853595524,161.395724084634,103.738614116241,6.45205605047762,8.27601599201939,7.17451309361207,39.6637833666142,0,7.38524393686274,0.540911356951966,25.6465415358321,74.7231126965602,0,1.61158997199083,0,69.429228404869,0,0.23874448473769,4.15750553165694,0,0,0.281338832821026,0,40.8713608082364,0,1.39473591775749,31.772650286082,0,0,103.760491003682,0,0,0,8.18515792362995,2.86065876347107,292.169372663267,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,1.84680620409113,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,84.8204375024613,29.0413474330796,77.2884320835727,0,0,0,0,42.9128763247022,0,0,0,0,11.9431431729421,5.92665682172372,9.77648231893801,5.63390144493182,13.0977775283293,14.3058070822474,0.539209063845416,5.61804353109152,0,34.6664099509765,0,0,0.394584402849391,9.67925728389311,0.30607276163049,6.19228480359182,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,2.32773639572207,0,1.12990370390266,0,0,0.189932387867636,0,0,6.61704283691993,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,16.6070564487064,0,82.0208545351461,0.558564802544508,0.687481272035051,0.717873024576814,1.1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| |||
|short_description=p1@ICAM3 | |||
}} |
Revision as of 18:32, 11 September 2013
Short description: | p1@ICAM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ICAM3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 20bp_to_ENST00000160262, NM_002162, uc002mob.2, uc010dxd.1, uc010xlf.1_5end |
EntrezGene: | ICAM3 |
HGNC: | 5346 |
UniProt: | P32942 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.35e-46 | 98 |
blood island | 7.35e-46 | 98 |
hemolymphoid system | 5.45e-41 | 108 |
bone marrow | 3.72e-30 | 76 |
immune system | 9.01e-30 | 93 |
bone element | 3.57e-26 | 82 |
skeletal element | 9.22e-22 | 90 |
skeletal system | 2.37e-17 | 100 |
connective tissue | 6.56e-16 | 371 |
blood | 6.25e-13 | 15 |
haemolymphatic fluid | 6.25e-13 | 15 |
organism substance | 6.25e-13 | 15 |
lateral plate mesoderm | 4.67e-12 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.37e-15 | 51 |
immune system cancer | 4.37e-15 | 51 |
leukemia | 1.34e-12 | 39 |
myeloid leukemia | 3.20e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.