FFCP PHASE1:Hg19::chr19:17865011..17865025,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23149|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29002|TSSclassifier=S|UniProt=|association_with_transcript=-97bp_to_ENST00000539407_5end|coexpression_cluster_id=C4|description=CAGE_peak_8_at_FCHO1_5end|id=chr19:17865011..17865025,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.07e-12;82!UBERON:0006241;2.00e-12;3!UBERON:0003057;2.00e-12;3!UBERON:0006222;6.05e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.14e-105!57;UBERON:0005068!9.14e-105!57;UBERON:0006241!9.14e-105!57;UBERON:0007135!9.14e-105!57;UBERON:0002616!2.54e-84!59;UBERON:0001017!1.50e-82!82;UBERON:0000955!4.19e-79!69;UBERON:0006238!4.19e-79!69;UBERON:0005743!1.88e-78!86;UBERON:0002780!1.75e-76!41;UBERON:0001890!1.75e-76!41;UBERON:0006240!1.75e-76!41;UBERON:0003080!1.46e-74!42;UBERON:0001893!2.00e-72!34;UBERON:0002020!2.21e-72!34;UBERON:0003528!2.21e-72!34;UBERON:0003075!3.12e-71!86;UBERON:0007284!3.12e-71!86;UBERON:0000073!1.81e-70!94;UBERON:0001016!1.81e-70!94;UBERON:0002791!1.63e-68!33;UBERON:0002346!9.03e-68!90;UBERON:0001869!6.92e-64!32;UBERON:0007023!2.74e-58!115;UBERON:0003056!8.16e-50!61;UBERON:0002619!9.77e-49!22;UBERON:0001950!7.74e-47!20;UBERON:0000033!1.98e-44!123;UBERON:0000956!1.09e-42!25;UBERON:0000203!1.09e-42!25;UBERON:0000153!4.76e-42!129;UBERON:0007811!4.76e-42!129;UBERON:0004121!2.19e-36!169;UBERON:0000924!2.21e-35!173;UBERON:0006601!2.21e-35!173;UBERON:0002308!5.12e-33!9;UBERON:0000125!5.12e-33!9;UBERON:0003076!1.19e-29!15;UBERON:0003057!1.19e-29!15;UBERON:0002298!1.59e-28!8;UBERON:0000200!1.04e-27!6;UBERON:0000025!7.14e-26!194;UBERON:0002420!2.55e-25!9;UBERON:0007245!2.55e-25!9;UBERON:0010009!2.55e-25!9;UBERON:0010011!2.55e-25!9;UBERON:0000454!2.55e-25!9;UBERON:0009663!2.63e-24!7;UBERON:0004111!2.33e-19!241;UBERON:0004733!2.51e-18!12;UBERON:0002028!2.51e-18!12;UBERON:0007277!2.51e-18!12;UBERON:0004732!7.57e-17!13;UBERON:0000477!2.77e-16!286;UBERON:0006331!2.31e-15!3;UBERON:0002240!4.32e-15!3;UBERON:0001872!4.87e-15!5;UBERON:0001896!4.98e-15!3;UBERON:0005290!4.98e-15!3;UBERON:0010096!4.98e-15!3;UBERON:0002771!6.63e-15!3;UBERON:0001871!1.01e-14!7;UBERON:0000988!1.01e-14!3;UBERON:0000483!1.90e-14!309;UBERON:0000119!3.11e-14!312;UBERON:0000475!6.96e-13!365;UBERON:0000064!1.25e-12!219;UBERON:0001875!3.46e-11!2;UBERON:0006514!3.46e-11!2;UBERON:0001897!4.65e-11!2;UBERON:0000369!7.53e-11!4;UBERON:0002435!7.53e-11!4;UBERON:0000204!7.53e-11!4;UBERON:0010082!7.53e-11!4;UBERON:0002148!1.35e-10!2;UBERON:0009662!1.35e-10!2;UBERON:0001870!1.98e-10!2;UBERON:0001873!3.04e-10!2;UBERON:0010122!3.04e-10!2;UBERON:0005174!3.05e-09!5;UBERON:0001137!3.05e-09!5;UBERON:0000349!4.39e-09!5;UBERON:0002021!4.64e-09!5;UBERON:0002680!2.02e-08!9;UBERON:0001895!2.02e-08!9;UBERON:0010092!2.02e-08!9;UBERON:0000062!1.66e-07!511;UBERON:0005383!4.21e-07!3;UBERON:0005382!4.21e-07!3;UBERON:0001894!7.18e-07!7;UBERON:0006222!7.18e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;3.02e-37;41!UBERON:0001890;3.02e-37;41!UBERON:0003528;2.61e-34;34!UBERON:0002020;2.61e-34;34!UBERON:0000073;3.79e-33;53!UBERON:0002616;3.79e-33;53!UBERON:0001893;4.47e-33;34!UBERON:0002791;1.95e-30;32!UBERON:0001869;7.64e-27;32!UBERON:0000125;1.89e-24;9!UBERON:0002308;1.89e-24;9!UBERON:0002420;2.99e-24;9!UBERON:0007245;2.99e-24;9!UBERON:0010009;2.99e-24;9!UBERON:0010011;2.99e-24;9!UBERON:0000454;2.99e-24;9!UBERON:0002619;4.63e-23;22!UBERON:0009663;2.07e-20;7!UBERON:0000956;2.73e-20;25!UBERON:0000203;2.73e-20;25!UBERON:0001950;2.17e-19;20!UBERON:0001897;1.05e-18;2!UBERON:0010225;1.05e-18;2!UBERON:0001875;1.19e-18;2!UBERON:0006514;1.19e-18;2!UBERON:0002702;3.75e-18;2!UBERON:0001017;9.84e-16;75!UBERON:0000955;6.49e-15;68!UBERON:0001016;3.02e-14;83!UBERON:0000200;1.18e-13;6!UBERON:0002298;1.18e-13;6!UBERON:0001896;2.00e-12;3!UBERON:0001870;2.00e-12;3!UBERON:0002240;2.00e-12;3!UBERON:0005174;2.00e-12;3!UBERON:0005290;2.00e-12;3!UBERON:0001137;2.00e-12;3!UBERON:0001894;7.27e-12;7!UBERON:0001871;8.75e-12;6!UBERON:0002038;1.89e-10;1!UBERON:0009661;1.89e-10;1!UBERON:0002950;1.89e-10;1!UBERON:0001891;1.89e-10;1!UBERON:0002336;2.16e-10;1!UBERON:0011215;2.16e-10;1!UBERON:0001018;2.16e-10;1!UBERON:0002473;2.16e-10;1!UBERON:0005340;2.16e-10;1!UBERON:0003544;2.16e-10;1!UBERON:0005970;2.16e-10;1!UBERON:0002316;2.16e-10;1!UBERON:0001020;2.16e-10;1!UBERON:0002437;2.16e-10;1!UBERON:0003112;6.05e-10;1!UBERON:0011158;6.05e-10;1!UBERON:0003128;6.05e-10;1!UBERON:0001703;6.05e-10;1!UBERON:0002241;6.05e-10;1!UBERON:0002784;8.07e-10;4!UBERON:0007023;1.30e-09;114!UBERON:0000349;5.99e-08;5!UBERON:0004733;4.45e-07;12!UBERON:0002028;4.45e-07;12!UBERON:0011216;5.45e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.01e-64,56;UBERON:0005068,4.01e-64,56;UBERON:0006241,4.01e-64,56;UBERON:0007135,4.01e-64,56;UBERON:0000073,3.43e-55,53;UBER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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23149 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29002 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-97bp_to_ENST00000539407_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_8_at_FCHO1_5end | |||
|id=chr19:17865011..17865025,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-12;82!UBERON:0006241;2.00e-12;3!UBERON:0003057;2.00e-12;3!UBERON:0006222;6.05e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@FCHO1 | |||
}} |
Revision as of 19:20, 11 September 2013
Short description: | p8@FCHO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FCHO1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -97bp_to_ENST00000539407_5end |
EntrezGene: | FCHO1 |
HGNC: | 29002 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.