FFCP PHASE1:Hg19::chr19:55315059..55315084,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100287534,3805|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6332|TSSclassifier=S|UniProt=Q99706|association_with_transcript=0bp_to_ENST00000359085,NM_001080770,NM_001080772,NM_002255,uc002qhf.2,uc002qhg.2,uc002qhh.2,uc002qhi.2,uc002qhj.2,uc010esd.2,uc010yfm.1_5end|description=CAGE_peak_1_at_KIR2DL4_5end|id=chr19:55315059..55315084,+|ontology_enrichment_celltype=CL:0002057!1.46e-20!42;CL:0000738!3.43e-20!140;CL:0000860!1.12e-18!45;CL:0002087!7.04e-17!119;CL:0000037!1.89e-15!172;CL:0000566!1.89e-15!172;CL:0000766!2.83e-15!76;CL:0002031!1.69e-14!124;CL:0002032!4.60e-14!165;CL:0000837!4.60e-14!165;CL:0000988!8.40e-14!182;CL:0000839!4.26e-12!70;CL:0002194!4.32e-12!63;CL:0000576!4.32e-12!63;CL:0000040!4.32e-12!63;CL:0000559!4.32e-12!63;CL:0000557!8.04e-12!71;CL:0002009!1.67e-11!65;CL:0000763!1.28e-10!112;CL:0000049!1.28e-10!112;CL:0000623!2.92e-07!3;CL:0000825!2.92e-07!3;CL:0000767!3.42e-07!3;CL:0000625!8.44e-07!11|ontology_enrichment_celltype_v019=CL:0000623;6.44e-17;3!CL:0000767;1.27e-16;3!CL:0000860;1.53e-12;33!CL:0002057;1.53e-12;33!CL:0000473;4.30e-09;39!CL:0000234;4.30e-09;39!CL:0000576;2.57e-07;48!CL:0002127;7.48e-07;1!CL:0000911;7.48e-07;1!CL:0000814;7.48e-07;1|ontology_enrichment_celltype_v019_2=CL:0000623,7.18e-17,3;CL:0000825,7.18e-17,3;CL:0000767,1.09e-16,3;CL:0000738,4.99e-13,136;CL:0000860,4.10e-12,42;CL:0002057,4.10e-12,42;CL:0002087,1.82e-11,115;CL:0000037,9.09e-11,168;CL:0000766,1.74e-10,72;CL:0000473,2.44e-10,48;CL:0000234,2.44e-10,48;CL:0002032,2.66e-10,161;CL:0000837,2.66e-10,161;CL:0000988,5.71e-10,177;CL:0002031,1.42e-09,120;CL:0002194,7.27e-08,59;CL:0000576,7.27e-08,59;CL:0000040,7.27e-08,59;CL:0000559,7.27e-08,59;CL:0002009,1.51e-07,61;CL:0000763,3.86e-07,108;CL:0000049,3.86e-07,108;CL:0002127,7.49e-07,1;CL:0000914,7.49e-07,1;CL:0000911,7.49e-07,1;CL:0000814,7.49e-07,1;CL:0002042,7.49e-07,1;CL:0002039,7.49e-07,1;CL:0002040,7.49e-07,1;CL:0002041,7.49e-07,1;CL:0000839,7.76e-07,66|ontology_enrichment_development_v019=CL:0002057;1.94e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.25e-22!102;UBERON:0003061!3.25e-22!102;UBERON:0002193!2.45e-21!112;UBERON:0007023!4.36e-16!115;UBERON:0000178!1.17e-13!15;UBERON:0000179!1.17e-13!15;UBERON:0000463!1.17e-13!15;UBERON:0002405!9.78e-11!115;UBERON:0002371!1.15e-09!80;UBERON:0001474!1.69e-08!86;UBERON:0003081!2.69e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-15;15!UBERON:0000179;1.43e-15;15!UBERON:0000463;1.43e-15;15!UBERON:0002390;6.76e-11;32!UBERON:0002108;1.51e-09;4!UBERON:0002106;5.53e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-17,98;UBERON:0003061,1.39e-17,98;UBERON:0000178,1.44e-15,15;UBERON:0000179,1.44e-15,15;UBERON:0000463,1.44e-15,15;UBERON:0002193,1.53e-15,108;UBERON:0002108,1.75e-09,4;UBERON:0005409,1.34e-08,25;UBERON:0002106,5.73e-08,3;UBERON:0004854,5.73e-08,3;UBERON:0009034,5.73e-08,3;UBERON:0002095,5.73e-08,3;UBERON:0004782,5.73e-08,3;UBERON:0003281,5.73e-08,3;UBERON:0009664,5.73e-08,3;UBERON:0002296,5.73e-08,3;UBERON:0005602,5.73e-08,3;UBERON:0001179,5.73e-08,3;UBERON:0006293,5.73e-08,3;UBERON:0002405,1.64e-07,93;UBERON:0004177,2.11e-07,7;UBERON:0005057,2.11e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,3.54027849164014,2.68680578668049,4.79929982279836,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.868043482863407,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,1.16214518452842,1.23350366406548,0.619412741790207,0.28769239232215,1.0246428261164,0.236482229888585,0,1.29096936716765,1.35426486594342,2.07066573496865,3.547779950752,0.674170453335254,0.306083892370903,2.24650318953266,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,1.5644487552606,0.434377689410233,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,2.60433381542567,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.480886793851,8.86638420908672,3.23441362289276,9.36904164842163,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100287534,3805 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6332 | |||
|TSSclassifier=S | |||
|UniProt=Q99706 | |||
|association_with_transcript=0bp_to_ENST00000359085,NM_001080770,NM_001080772,NM_002255,uc002qhf.2,uc002qhg.2,uc002qhh.2,uc002qhi.2,uc002qhj.2,uc010esd.2,uc010yfm.1_5end | |||
|description=CAGE_peak_1_at_KIR2DL4_5end | |||
|id=chr19:55315059..55315084,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.46e-20!42;CL:0000738!3.43e-20!140;CL:0000860!1.12e-18!45;CL:0002087!7.04e-17!119;CL:0000037!1.89e-15!172;CL:0000566!1.89e-15!172;CL:0000766!2.83e-15!76;CL:0002031!1.69e-14!124;CL:0002032!4.60e-14!165;CL:0000837!4.60e-14!165;CL:0000988!8.40e-14!182;CL:0000839!4.26e-12!70;CL:0002194!4.32e-12!63;CL:0000576!4.32e-12!63;CL:0000040!4.32e-12!63;CL:0000559!4.32e-12!63;CL:0000557!8.04e-12!71;CL:0002009!1.67e-11!65;CL:0000763!1.28e-10!112;CL:0000049!1.28e-10!112;CL:0000623!2.92e-07!3;CL:0000825!2.92e-07!3;CL:0000767!3.42e-07!3;CL:0000625!8.44e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.44e-17;3!CL:0000767;1.27e-16;3!CL:0000860;1.53e-12;33!CL:0002057;1.53e-12;33!CL:0000473;4.30e-09;39!CL:0000234;4.30e-09;39!CL:0000576;2.57e-07;48!CL:0002127;7.48e-07;1!CL:0000911;7.48e-07;1!CL:0000814;7.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.18e-17,3;CL:0000825,7.18e-17,3;CL:0000767,1.09e-16,3;CL:0000738,4.99e-13,136;CL:0000860,4.10e-12,42;CL:0002057,4.10e-12,42;CL:0002087,1.82e-11,115;CL:0000037,9.09e-11,168;CL:0000766,1.74e-10,72;CL:0000473,2.44e-10,48;CL:0000234,2.44e-10,48;CL:0002032,2.66e-10,161;CL:0000837,2.66e-10,161;CL:0000988,5.71e-10,177;CL:0002031,1.42e-09,120;CL:0002194,7.27e-08,59;CL:0000576,7.27e-08,59;CL:0000040,7.27e-08,59;CL:0000559,7.27e-08,59;CL:0002009,1.51e-07,61;CL:0000763,3.86e-07,108;CL:0000049,3.86e-07,108;CL:0002127,7.49e-07,1;CL:0000914,7.49e-07,1;CL:0000911,7.49e-07,1;CL:0000814,7.49e-07,1;CL:0002042,7.49e-07,1;CL:0002039,7.49e-07,1;CL:0002040,7.49e-07,1;CL:0002041,7.49e-07,1;CL:0000839,7.76e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.25e-22!102;UBERON:0003061!3.25e-22!102;UBERON:0002193!2.45e-21!112;UBERON:0007023!4.36e-16!115;UBERON:0000178!1.17e-13!15;UBERON:0000179!1.17e-13!15;UBERON:0000463!1.17e-13!15;UBERON:0002405!9.78e-11!115;UBERON:0002371!1.15e-09!80;UBERON:0001474!1.69e-08!86;UBERON:0003081!2.69e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-15;15!UBERON:0000179;1.43e-15;15!UBERON:0000463;1.43e-15;15!UBERON:0002390;6.76e-11;32!UBERON:0002108;1.51e-09;4!UBERON:0002106;5.53e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-17,98;UBERON:0003061,1.39e-17,98;UBERON:0000178,1.44e-15,15;UBERON:0000179,1.44e-15,15;UBERON:0000463,1.44e-15,15;UBERON:0002193,1.53e-15,108;UBERON:0002108,1.75e-09,4;UBERON:0005409,1.34e-08,25;UBERON:0002106,5.73e-08,3;UBERON:0004854,5.73e-08,3;UBERON:0009034,5.73e-08,3;UBERON:0002095,5.73e-08,3;UBERON:0004782,5.73e-08,3;UBERON:0003281,5.73e-08,3;UBERON:0009664,5.73e-08,3;UBERON:0002296,5.73e-08,3;UBERON:0005602,5.73e-08,3;UBERON:0001179,5.73e-08,3;UBERON:0006293,5.73e-08,3;UBERON:0002405,1.64e-07,93;UBERON:0004177,2.11e-07,7;UBERON:0005057,2.11e-07,7 | |||
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|short_description=p1@KIR2DL4 | |||
}} |
Revision as of 22:22, 11 September 2013
Short description: | p1@KIR2DL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KIR2DL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359085, NM_001080770, NM_001080772, NM_002255, uc002qhf.2, uc002qhg.2, uc002qhh.2, uc002qhi.2, uc002qhj.2, uc010esd.2, uc010yfm.1_5end |
EntrezGene: | 100287534,3805 |
HGNC: | 6332 |
UniProt: | Q99706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-17 | 98 |
blood island | 1.39e-17 | 98 |
blood | 1.44e-15 | 15 |
haemolymphatic fluid | 1.44e-15 | 15 |
organism substance | 1.44e-15 | 15 |
hemolymphoid system | 1.53e-15 | 108 |
small intestine | 1.75e-09 | 4 |
gastrointestinal system | 1.34e-08 | 25 |
spleen | 5.73e-08 | 3 |
gastrointestinal system mesentery | 5.73e-08 | 3 |
stomach region | 5.73e-08 | 3 |
mesentery | 5.73e-08 | 3 |
gastrointestinal system serosa | 5.73e-08 | 3 |
mesentery of stomach | 5.73e-08 | 3 |
gut mesentery | 5.73e-08 | 3 |
dorsal mesentery | 5.73e-08 | 3 |
dorsal mesogastrium | 5.73e-08 | 3 |
peritoneal cavity | 5.73e-08 | 3 |
spleen primordium | 5.73e-08 | 3 |
immune system | 1.64e-07 | 93 |
hemopoietic organ | 2.11e-07 | 7 |
immune organ | 2.11e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.