FFCP PHASE1:Hg19::chr2:206950673..206950693,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54891|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25997|TSSclassifier=W|UniProt=Q53TQ3|association_with_transcript=212bp_to_ENST00000233270,ENST00000403263,NM_017759,uc002vaz.3_5end|description=CAGE_peak_3_at_INO80D_5end|id=chr2:206950673..206950693,-|ontology_enrichment_celltype=CL:0002057!2.43e-13!42;CL:0000860!1.51e-12!45;CL:0000738!3.71e-12!140;CL:0002031!1.17e-10!124;CL:0002087!1.23e-10!119;CL:0000557!3.17e-09!71;CL:0000037!5.27e-09!172;CL:0000566!5.27e-09!172;CL:0000766!1.65e-08!76;CL:0002009!1.88e-08!65;CL:0000839!1.96e-08!70;CL:0002032!3.93e-08!165;CL:0000837!3.93e-08!165;CL:0002194!5.03e-08!63;CL:0000576!5.03e-08!63;CL:0000040!5.03e-08!63;CL:0000559!5.03e-08!63;CL:0000988!6.64e-07!182|ontology_enrichment_celltype_v019=CL:0000860;2.18e-12;33!CL:0002057;2.18e-12;33!CL:0000576;7.36e-09;48!CL:0000473;3.84e-08;39!CL:0000234;3.84e-08;39|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-14,42;CL:0002057,2.72e-14,42;CL:0000738,3.81e-12,136;CL:0002087,4.83e-12,115;CL:0000473,2.95e-11,48;CL:0000234,2.95e-11,48;CL:0002031,1.14e-09,120;CL:0002009,1.61e-09,61;CL:0002194,2.57e-09,59;CL:0000576,2.57e-09,59;CL:0000040,2.57e-09,59;CL:0000559,2.57e-09,59;CL:0000766,7.61e-09,72;CL:0000037,9.55e-09,168;CL:0000557,1.14e-08,67;CL:0000988,1.93e-07,177;CL:0002032,2.24e-07,161;CL:0000837,2.24e-07,161;CL:0000839,2.33e-07,66|ontology_enrichment_development_v019=CL:0002057;1.14e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.87e-13!115;UBERON:0002390!4.73e-09!102;UBERON:0003061!4.73e-09!102;UBERON:0002193!3.22e-08!112;UBERON:0002371!7.93e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.33e-12,114;UBERON:0002390,9.81e-11,98;UBERON:0003061,9.81e-11,98;UBERON:0002193,9.58e-10,108;UBERON:0001474,7.63e-08,82;UBERON:0002371,8.88e-08,76;UBERON:0002405,1.01e-07,93|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0.873765488520689,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.136874425072884,0.376627918784408,0.305653622991805,0.410502947249729,0.708397031823113,0.393364276848904,0.383829398097213,1.23852898652861,0,0,0.369754010166788,0.46480320348181,0.284338464974843,0,1.66198622559563,2.4065333696417,1.95309783644267,0.895661896959697,1.29557466407592,1.03030227053675,2.32637182047304,1.13362783106643,0.970336244751265,2.32429036905685,2.05583944010913,3.40677007984614,1.43846196161075,2.0492856522328,1.18241114944293,2.06847408441971,3.22742341791913,1.35426486594342,2.44715041405386,1.91034305040492,1.34834090667051,1.53041946185451,2.56743221660875,0.639337125799041,1.64925650093358,1.19678194572979,0.852449501065388,1.45104619314292,0.56738522469114,0.622822248995575,2.51248665256743,1.5644487552606,1.73751075764093,1.81619850790011,0.368277635987565,1.26584954976354,0.422510572623884,0.850417199860174,1.04829322754188,1.12328631146495,1.05123824989054,0.64290234678832,0.855038231223746,0.79566670879636,1.46131323011707,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0.661044872784862,1.90810750907073,1.70763890732835,2.34894875748376,1.52909291250092,0,0.560508562981536,0.263384084775077,3.14735632182133,2.75107533924415,2.87842098599313,0.334372990781356,0.977766799900771,0.473447805734733,0,0.779873198196215,1.17842362989935,0.664601683750863,0.541607727530031,0.768547918354051,1.04047478047903,1.31550323682941,0.552700035571697,0.579606171470105,1.33457906845854,2.1403266247177,5.22677619024884,0.793165398882963,1.14966148080576,0.68725489096526,1.26509846009751,1.59282707162048,0,0,1.20460095262218,1.15187950038977,2.49861453104692,0.947109008176067,0,1.20964045934839,1.60464117470104,1.01377082717959,0,0,0.511450247374121,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.661743720148475,0.221729397462564,0.087834785693126,1.11332214173056,0,0.370784442784429,0.649094787309367,0.348259474598534,0.398873881556595,2.8618874916641,3.43196946468077,0.371457501329565,0.39752481473341,0,0,0,0,0,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0,0,1.10298924103761,0,0.982297011124877,1.34717623575702,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.794455084879313,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.942974704487816,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0.149448680551801,0,0.485618833104395,0.140450806702248,0.61246251376468,0.61417158655884,0.103325781175765,1.18800285728205,0.247266929278557,0,1.43723628363248,0.505008341862199,0.250237039743928,1.93944880838928,0.438977620880838,0.30648779579902,0.300476117813194,0.453728732640084,0.89694817844431,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,0.257640540045629,0.558350568994769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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25997 | |||
|TSSclassifier=W | |||
|UniProt=Q53TQ3 | |||
|association_with_transcript=212bp_to_ENST00000233270,ENST00000403263,NM_017759,uc002vaz.3_5end | |||
|description=CAGE_peak_3_at_INO80D_5end | |||
|id=chr2:206950673..206950693,- | |||
|ontology_enrichment_celltype=CL:0002057!2.43e-13!42;CL:0000860!1.51e-12!45;CL:0000738!3.71e-12!140;CL:0002031!1.17e-10!124;CL:0002087!1.23e-10!119;CL:0000557!3.17e-09!71;CL:0000037!5.27e-09!172;CL:0000566!5.27e-09!172;CL:0000766!1.65e-08!76;CL:0002009!1.88e-08!65;CL:0000839!1.96e-08!70;CL:0002032!3.93e-08!165;CL:0000837!3.93e-08!165;CL:0002194!5.03e-08!63;CL:0000576!5.03e-08!63;CL:0000040!5.03e-08!63;CL:0000559!5.03e-08!63;CL:0000988!6.64e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-12;33!CL:0002057;2.18e-12;33!CL:0000576;7.36e-09;48!CL:0000473;3.84e-08;39!CL:0000234;3.84e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-14,42;CL:0002057,2.72e-14,42;CL:0000738,3.81e-12,136;CL:0002087,4.83e-12,115;CL:0000473,2.95e-11,48;CL:0000234,2.95e-11,48;CL:0002031,1.14e-09,120;CL:0002009,1.61e-09,61;CL:0002194,2.57e-09,59;CL:0000576,2.57e-09,59;CL:0000040,2.57e-09,59;CL:0000559,2.57e-09,59;CL:0000766,7.61e-09,72;CL:0000037,9.55e-09,168;CL:0000557,1.14e-08,67;CL:0000988,1.93e-07,177;CL:0002032,2.24e-07,161;CL:0000837,2.24e-07,161;CL:0000839,2.33e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.87e-13!115;UBERON:0002390!4.73e-09!102;UBERON:0003061!4.73e-09!102;UBERON:0002193!3.22e-08!112;UBERON:0002371!7.93e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.33e-12,114;UBERON:0002390,9.81e-11,98;UBERON:0003061,9.81e-11,98;UBERON:0002193,9.58e-10,108;UBERON:0001474,7.63e-08,82;UBERON:0002371,8.88e-08,76;UBERON:0002405,1.01e-07,93 | |||
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| |||
|short_description=p3@INO80D | |||
}} |
Revision as of 16:11, 12 September 2013
Short description: | p3@INO80D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_INO80D_5end |
Coexpression cluster: | NA |
Association with transcript: | 212bp_to_ENST00000233270, ENST00000403263, NM_017759, uc002vaz.3_5end |
EntrezGene: | INO80D |
HGNC: | 25997 |
UniProt: | Q53TQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.72e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-14 | 42 |
leukocyte | 3.81e-12 | 136 |
nongranular leukocyte | 4.83e-12 | 115 |
defensive cell | 2.95e-11 | 48 |
phagocyte | 2.95e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.14e-09 | 120 |
macrophage dendritic cell progenitor | 1.61e-09 | 61 |
monopoietic cell | 2.57e-09 | 59 |
monocyte | 2.57e-09 | 59 |
monoblast | 2.57e-09 | 59 |
promonocyte | 2.57e-09 | 59 |
myeloid leukocyte | 7.61e-09 | 72 |
hematopoietic stem cell | 9.55e-09 | 168 |
granulocyte monocyte progenitor cell | 1.14e-08 | 67 |
hematopoietic cell | 1.93e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-07 | 161 |
myeloid lineage restricted progenitor cell | 2.33e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.33e-12 | 114 |
hematopoietic system | 9.81e-11 | 98 |
blood island | 9.81e-11 | 98 |
hemolymphoid system | 9.58e-10 | 108 |
bone element | 7.63e-08 | 82 |
bone marrow | 8.88e-08 | 76 |
immune system | 1.01e-07 | 93 |
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