FFCP PHASE1:Hg19::chr2:241807954..241807966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=341|TSSclassifier=S|UniProt=P21549|association_with_transcript=58bp_to_ENST00000307503_5end|coexpression_cluster_id=C5|description=CAGE_peak_4_at_AGXT_5end|id=chr2:241807954..241807966,+|ontology_enrichment_celltype=CL:0000181!6.97e-17!12;CL:0000417!6.97e-17!12;CL:0000668!6.97e-17!12;CL:0000414!6.97e-17!12;CL:0000412!6.97e-17!12;CL:0000182!6.97e-17!12;CL:0002553!7.55e-14!1|ontology_enrichment_celltype_v019=CL:0002553;1.26e-25;1!CL:0000182;2.95e-09;12|ontology_enrichment_celltype_v019_2=CL:0002553,1.26e-25,1;CL:0000182,3.01e-09,12|ontology_enrichment_development_v019=UBERON:0004161;4.73e-10;11!UBERON:0009497;1.19e-08;13!UBERON:0001041;4.17e-08;30|ontology_enrichment_disease=DOID:178!9.73e-14!1;DOID:326!9.73e-14!1;DOID:3978!9.73e-14!1;DOID:3394!9.73e-14!1;DOID:5844!9.73e-14!1;DOID:114!1.64e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.98e-23!19;UBERON:0006925!1.98e-23!19;UBERON:0008836!1.98e-23!19;UBERON:0008835!3.32e-20!22;UBERON:0003894!3.32e-20!22;UBERON:0009854!2.57e-19!23;UBERON:0007499!9.46e-18!25;UBERON:0009497!9.46e-18!25;UBERON:0000015!9.46e-18!25;UBERON:0002423!9.46e-18!25;UBERON:0006235!9.46e-18!25;UBERON:0004161!9.46e-18!25;UBERON:0005057!4.66e-17!26;UBERON:0009856!4.66e-17!26;UBERON:0002365!2.92e-14!31;UBERON:0002330!2.92e-14!31;UBERON:0002363!1.42e-13!1;UBERON:0007647!1.42e-13!1;UBERON:0010115!1.42e-13!1;UBERON:0002368!1.35e-12!35;UBERON:0003929!9.16e-11!54;UBERON:0000949!1.01e-09!45;UBERON:0005911!6.15e-09!82;UBERON:0005172!6.90e-08!55;UBERON:0005173!6.90e-08!55;UBERON:0002360!1.99e-07!2;UBERON:0000094!1.99e-07!2;UBERON:0007645!1.99e-07!2;UBERON:0002530!2.51e-07!59;UBERON:0002417!4.49e-07!61;UBERON:0000916!4.49e-07!61|ontology_enrichment_uberon_v019=UBERON:0002107;2.45e-21;19!UBERON:0006925;2.45e-21;19!UBERON:0002423;2.38e-16;25!UBERON:0002365;3.74e-13;31!UBERON:0002330;3.74e-13;31!UBERON:0002368;4.47e-11;33!UBERON:0000949;4.48e-08;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.45e-21,19;UBERON:0006925,2.45e-21,19;UBERON:0008836,2.45e-21,19;UBERON:0008835,1.66e-18,22;UBERON:0003894,1.66e-18,22;UBERON:0009854,1.00e-17,23;UBERON:0007499,2.38e-16,25;UBERON:0009497,2.38e-16,25;UBERON:0000015,2.38e-16,25;UBERON:0002423,2.38e-16,25;UBERON:0006235,2.38e-16,25;UBERON:0004161,2.38e-16,25;UBERON:0009856,9.69e-16,26;UBERON:0002365,2.79e-13,31;UBERON:0002330,2.79e-13,31;UBERON:0002368,8.13e-12,35;UBERON:0000949,2.77e-09,45;UBERON:0003929,8.46e-08,54;UBERON:0005172,8.46e-08,54;UBERON:0005173,8.46e-08,54;UBERON:0005911,8.69e-08,82;UBERON:0001041,2.39e-07,87;UBERON:0002530,3.62e-07,59;UBERON:0002417,4.71e-07,60;UBERON:0000916,4.71e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,12.9973779469909,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2922905025562,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148246908832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28987494654911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3621189004521,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@AGXT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |||
|TSSclassifier=S | |||
|UniProt=P21549 | |||
|association_with_transcript=58bp_to_ENST00000307503_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_AGXT_5end | |||
|id=chr2:241807954..241807966,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.97e-17!12;CL:0000417!6.97e-17!12;CL:0000668!6.97e-17!12;CL:0000414!6.97e-17!12;CL:0000412!6.97e-17!12;CL:0000182!6.97e-17!12;CL:0002553!7.55e-14!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.26e-25;1!CL:0000182;2.95e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.26e-25,1;CL:0000182,3.01e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.73e-10;11!UBERON:0009497;1.19e-08;13!UBERON:0001041;4.17e-08;30 | |||
|ontology_enrichment_disease=DOID:178!9.73e-14!1;DOID:326!9.73e-14!1;DOID:3978!9.73e-14!1;DOID:3394!9.73e-14!1;DOID:5844!9.73e-14!1;DOID:114!1.64e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.98e-23!19;UBERON:0006925!1.98e-23!19;UBERON:0008836!1.98e-23!19;UBERON:0008835!3.32e-20!22;UBERON:0003894!3.32e-20!22;UBERON:0009854!2.57e-19!23;UBERON:0007499!9.46e-18!25;UBERON:0009497!9.46e-18!25;UBERON:0000015!9.46e-18!25;UBERON:0002423!9.46e-18!25;UBERON:0006235!9.46e-18!25;UBERON:0004161!9.46e-18!25;UBERON:0005057!4.66e-17!26;UBERON:0009856!4.66e-17!26;UBERON:0002365!2.92e-14!31;UBERON:0002330!2.92e-14!31;UBERON:0002363!1.42e-13!1;UBERON:0007647!1.42e-13!1;UBERON:0010115!1.42e-13!1;UBERON:0002368!1.35e-12!35;UBERON:0003929!9.16e-11!54;UBERON:0000949!1.01e-09!45;UBERON:0005911!6.15e-09!82;UBERON:0005172!6.90e-08!55;UBERON:0005173!6.90e-08!55;UBERON:0002360!1.99e-07!2;UBERON:0000094!1.99e-07!2;UBERON:0007645!1.99e-07!2;UBERON:0002530!2.51e-07!59;UBERON:0002417!4.49e-07!61;UBERON:0000916!4.49e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.45e-21;19!UBERON:0006925;2.45e-21;19!UBERON:0002423;2.38e-16;25!UBERON:0002365;3.74e-13;31!UBERON:0002330;3.74e-13;31!UBERON:0002368;4.47e-11;33!UBERON:0000949;4.48e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.45e-21,19;UBERON:0006925,2.45e-21,19;UBERON:0008836,2.45e-21,19;UBERON:0008835,1.66e-18,22;UBERON:0003894,1.66e-18,22;UBERON:0009854,1.00e-17,23;UBERON:0007499,2.38e-16,25;UBERON:0009497,2.38e-16,25;UBERON:0000015,2.38e-16,25;UBERON:0002423,2.38e-16,25;UBERON:0006235,2.38e-16,25;UBERON:0004161,2.38e-16,25;UBERON:0009856,9.69e-16,26;UBERON:0002365,2.79e-13,31;UBERON:0002330,2.79e-13,31;UBERON:0002368,8.13e-12,35;UBERON:0000949,2.77e-09,45;UBERON:0003929,8.46e-08,54;UBERON:0005172,8.46e-08,54;UBERON:0005173,8.46e-08,54;UBERON:0005911,8.69e-08,82;UBERON:0001041,2.39e-07,87;UBERON:0002530,3.62e-07,59;UBERON:0002417,4.71e-07,60;UBERON:0000916,4.71e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,12.9973779469909,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2922905025562,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148246908832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28987494654911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3621189004521,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@AGXT | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p4@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AGXT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 58bp_to_ENST00000307503_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | P21549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.26e-25 | 1 |
hepatocyte | 3.01e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.45e-21 | 19 |
digestive gland | 2.45e-21 | 19 |
liver bud | 2.45e-21 | 19 |
hepatic diverticulum | 1.66e-18 | 22 |
liver primordium | 1.66e-18 | 22 |
digestive tract diverticulum | 1.00e-17 | 23 |
epithelial sac | 2.38e-16 | 25 |
epithelium of foregut-midgut junction | 2.38e-16 | 25 |
anatomical boundary | 2.38e-16 | 25 |
hepatobiliary system | 2.38e-16 | 25 |
foregut-midgut junction | 2.38e-16 | 25 |
septum transversum | 2.38e-16 | 25 |
sac | 9.69e-16 | 26 |
exocrine gland | 2.79e-13 | 31 |
exocrine system | 2.79e-13 | 31 |
endocrine gland | 8.13e-12 | 35 |
endocrine system | 2.77e-09 | 45 |
gut epithelium | 8.46e-08 | 54 |
abdomen element | 8.46e-08 | 54 |
abdominal segment element | 8.46e-08 | 54 |
endo-epithelium | 8.69e-08 | 82 |
foregut | 2.39e-07 | 87 |
gland | 3.62e-07 | 59 |
abdominal segment of trunk | 4.71e-07 | 60 |
abdomen | 4.71e-07 | 60 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.