FFCP PHASE1:Hg19::chr22:20784252..20784260,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=91179|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19869|TSSclassifier=S|UniProt=|association_with_transcript=-39bp_to_ENST00000494535_5end|description=CAGE_peak_5_at_SCARF2_5end|id=chr22:20784252..20784260,-|ontology_enrichment_celltype=CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172;CL:0000738!1.30e-07!140;CL:0002087!1.30e-07!119;CL:0002031!4.43e-07!124;CL:0000839!4.69e-07!70;CL:0002057!5.62e-07!42;CL:0002032!6.35e-07!165;CL:0000837!6.35e-07!165;CL:0000557!6.66e-07!71;CL:0000988!8.08e-07!182;CL:0000893!8.13e-07!2;CL:0002489!8.13e-07!2;CL:0000809!8.13e-07!2;CL:0000808!8.13e-07!2;CL:0000894!8.13e-07!2;CL:0000806!8.13e-07!2;CL:0000807!8.13e-07!2;CL:0000805!8.13e-07!2;CL:0002425!8.13e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!7.58e-17!34;UBERON:0001869!5.66e-16!32;UBERON:0002619!1.56e-15!22;UBERON:0002791!2.73e-15!33;UBERON:0001950!1.07e-14!20;UBERON:0001049!6.70e-14!57;UBERON:0005068!6.70e-14!57;UBERON:0006241!6.70e-14!57;UBERON:0007135!6.70e-14!57;UBERON:0000956!2.16e-13!25;UBERON:0000203!2.16e-13!25;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0003080!6.43e-13!42;UBERON:0002020!7.16e-13!34;UBERON:0003528!7.16e-13!34;UBERON:0002616!1.02e-11!59;UBERON:0007023!4.36e-11!115;UBERON:0000200!2.10e-10!6;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0001017!4.42e-09!82;UBERON:0000153!6.66e-09!129;UBERON:0007811!6.66e-09!129;UBERON:0005743!1.96e-08!86;UBERON:0002771!4.30e-08!3;UBERON:0003056!9.83e-08!61;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000073!3.47e-07!94;UBERON:0001016!3.47e-07!94;UBERON:0002346!4.79e-07!90;UBERON:0003127!5.96e-07!2;UBERON:0000974!8.48e-07!10;UBERON:0000341!9.09e-07!2|ontology_enrichment_uberon_v019=UBERON:0003127;6.30e-26;2!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.14e-26,2;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0005178,6.95e-07,34;UBERON:0002224,6.95e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40398589056729,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88645166119599,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=91179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19869 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_ENST00000494535_5end | |||
|description=CAGE_peak_5_at_SCARF2_5end | |||
|id=chr22:20784252..20784260,- | |||
|ontology_enrichment_celltype=CL:0000037!1.23e-07!172;CL:0000566!1.23e-07!172;CL:0000738!1.30e-07!140;CL:0002087!1.30e-07!119;CL:0002031!4.43e-07!124;CL:0000839!4.69e-07!70;CL:0002057!5.62e-07!42;CL:0002032!6.35e-07!165;CL:0000837!6.35e-07!165;CL:0000557!6.66e-07!71;CL:0000988!8.08e-07!182;CL:0000893!8.13e-07!2;CL:0002489!8.13e-07!2;CL:0000809!8.13e-07!2;CL:0000808!8.13e-07!2;CL:0000894!8.13e-07!2;CL:0000806!8.13e-07!2;CL:0000807!8.13e-07!2;CL:0000805!8.13e-07!2;CL:0002425!8.13e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!7.58e-17!34;UBERON:0001869!5.66e-16!32;UBERON:0002619!1.56e-15!22;UBERON:0002791!2.73e-15!33;UBERON:0001950!1.07e-14!20;UBERON:0001049!6.70e-14!57;UBERON:0005068!6.70e-14!57;UBERON:0006241!6.70e-14!57;UBERON:0007135!6.70e-14!57;UBERON:0000956!2.16e-13!25;UBERON:0000203!2.16e-13!25;UBERON:0002780!2.51e-13!41;UBERON:0001890!2.51e-13!41;UBERON:0006240!2.51e-13!41;UBERON:0003080!6.43e-13!42;UBERON:0002020!7.16e-13!34;UBERON:0003528!7.16e-13!34;UBERON:0002616!1.02e-11!59;UBERON:0007023!4.36e-11!115;UBERON:0000200!2.10e-10!6;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0001017!4.42e-09!82;UBERON:0000153!6.66e-09!129;UBERON:0007811!6.66e-09!129;UBERON:0005743!1.96e-08!86;UBERON:0002771!4.30e-08!3;UBERON:0003056!9.83e-08!61;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000073!3.47e-07!94;UBERON:0001016!3.47e-07!94;UBERON:0002346!4.79e-07!90;UBERON:0003127!5.96e-07!2;UBERON:0000974!8.48e-07!10;UBERON:0000341!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.30e-26;2!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.14e-26,2;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0005178,6.95e-07,34;UBERON:0002224,6.95e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40398589056729,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88645166119599,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,1.36272190246085,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@SCARF2 | |||
}} |
Revision as of 11:02, 12 September 2013
Short description: | p5@SCARF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SCARF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000494535_5end |
EntrezGene: | SCARF2 |
HGNC: | 19869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.14e-26 | 2 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
thoracic cavity element | 6.95e-07 | 34 |
thoracic cavity | 6.95e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.