FFCP PHASE1:Hg19::chr3:8543500..8543518,+: Difference between revisions
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{{FFCP | 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7715,19.019507741253,46.7299565391496,51.6911548889195,64.0711406457357,0,1.60698544745092,3.88184358887261,2.72820646743172,16.0674005414234,25.2301105872497,4.30018749454354,2.68211655728414,3.67154047030939,1.74540276136151,22.7481541421622,66.5871082518485,99.3677601557549,138.873126441736,1.38783067318587,1.96678029534652,20.2717601618299,0.61193297845189,0.801652215796681,0.827054095813604,0,35.9948816536637,12.5943141173404,4.1458471972939,3.30985586758065,120.477199774054,54.5167548051965,2.00225620491619,5.21427600085206,11.885977433545,14.9570821953688,35.3705080676884,112.124125166935,88.9806582821731,21.1485446465805,46.6911557106323,55.5542795431842,1.38385556638657,1.17400080465487,5.7921684686082,0.179650404213174,244.026580099592,86.6691839256523,24.82066687726,50.597514838099,48.7082580490284,0.641136984606466|short_description=p1@LMCD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6633 | |||
|TSSclassifier=S | |||
|UniProt=C9IYS1,F5GX84,Q9NZU5 | |||
|association_with_transcript=0bp_to_ENST00000415597,ENST00000470776,ENST00000535732,NM_014583,uc003bqq.2,uc011atd.1,uc011ate.1_5end | |||
|coexpression_cluster_id=C2756 | |||
|description=CAGE_peak_1_at_LMCD1_5end | |||
|id=chr3:8543500..8543518,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-14!180;CL:0000136!1.60e-09!15;CL:0000057!9.34e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.71e-09;13!CL:0000134;3.57e-07;55!CL:0000723;4.26e-07;61!CL:0000048;9.38e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.12e-10,15;CL:0000057,5.33e-08,76;CL:0000680,8.70e-07,58;CL:0000056,8.70e-07,58;CL:0000355,8.70e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.98e-19!365;UBERON:0002100!2.03e-15!216;UBERON:0000468!7.99e-13!659;UBERON:0005256!1.60e-12!143;UBERON:0000483!1.28e-11!309;UBERON:0000481!1.44e-11!347;UBERON:0000119!1.51e-11!312;UBERON:0003914!2.87e-09!118;UBERON:0000914!3.14e-09!83;UBERON:0002329!3.14e-09!83;UBERON:0003077!3.14e-09!83;UBERON:0003059!3.14e-09!83;UBERON:0007282!3.14e-09!83;UBERON:0009618!3.14e-09!83;UBERON:0007285!3.14e-09!83;UBERON:0003104!4.69e-09!238;UBERON:0009142!4.69e-09!238;UBERON:0003103!5.63e-09!69;UBERON:0002385!1.23e-08!63;UBERON:0001015!1.23e-08!63;UBERON:0000383!1.23e-08!63;UBERON:0000025!1.35e-08!194;UBERON:0004111!1.49e-08!241;UBERON:0000477!2.58e-08!286;UBERON:0004290!2.68e-08!70;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0000467!6.92e-08!625;UBERON:0009569!7.06e-08!113;UBERON:0000480!1.00e-07!626;UBERON:0007100!1.69e-07!27;UBERON:0000486!1.99e-07!82;UBERON:0001013!2.65e-07!14;UBERON:0004872!2.90e-07!84;UBERON:0000478!5.06e-07!24;UBERON:0007023!5.83e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.77e-07;14!UBERON:0007100;2.59e-07;25!UBERON:0000478;2.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.60e-13,160;UBERON:0009142,4.60e-13,160;UBERON:0002100,1.01e-12,199;UBERON:0000483,1.42e-11,306;UBERON:0000119,1.70e-11,309;UBERON:0005256,6.80e-10,122;UBERON:0003914,4.06e-09,117;UBERON:0002385,6.53e-09,64;UBERON:0001015,6.53e-09,64;UBERON:0000383,6.53e-09,64;UBERON:0007503,6.54e-09,78;UBERON:0007524,1.11e-08,73;UBERON:0003103,1.21e-08,68;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003077,1.78e-08,72;UBERON:0007285,1.78e-08,72;UBERON:0001134,1.87e-08,62;UBERON:0002036,1.87e-08,62;UBERON:0003082,1.87e-08,62;UBERON:0000025,4.90e-08,192;UBERON:0007100,1.11e-07,27;UBERON:0000486,1.37e-07,83;UBERON:0004111,1.44e-07,240;UBERON:0007023,1.54e-07,114;UBERON:0001013,1.77e-07,14;UBERON:0004872,3.03e-07,83;UBERON:0000478,3.44e-07,24;UBERON:0009569,5.22e-07,112;UBERON:0000948,7.06e-07,24;UBERON:0005498,7.06e-07,24;UBERON:0004140,7.06e-07,24;UBERON:0009881,7.06e-07,24;UBERON:0004141,7.06e-07,24;UBERON:0003084,7.06e-07,24;UBERON:0007005,7.06e-07,24;UBERON:0004139,7.06e-07,24;UBERON:0004291,7.06e-07,24 | |||
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| |||
|short_description=p1@LMCD1 | |||
}} |
Revision as of 01:29, 13 September 2013
Short description: | p1@LMCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LMCD1_5end |
Coexpression cluster: | C2756_skeletal_Adipocyte_mature_Preadipocyte_Hepatic_Mesenchymal_aorta |
Association with transcript: | 0bp_to_ENST00000415597, ENST00000470776, ENST00000535732, NM_014583, uc003bqq.2, uc011atd.1, uc011ate.1_5end |
EntrezGene: | LMCD1 |
HGNC: | 6633 |
UniProt: | C9IYS1F5GX84Q9NZU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.12e-10 | 15 |
fibroblast | 5.33e-08 | 76 |
muscle precursor cell | 8.70e-07 | 58 |
myoblast | 8.70e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.70e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.