FFCP PHASE1:Hg19::chr3:47823298..47823423,-: Difference between revisions
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{{FFCP | 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8,14.0352934292104,17.1990607639338,27.1610867871294,100.81268428548,44.520465915992,81.1918131653046,32.0684545892101,33.1545862660859,27.144237857938,40.7843200470314,33.1275066291614,30.6479881892164,30.5916123085376,26.2499971118376,37.8026333097683,3.72247662797184,1.91107787795487,35.570027311698,26.8931640105766,46.3288114932624,16.8331497668853,21.5591894398119,33.6346185088078,38.8568794447312,56.1454712309054,76.3970976619654,41.1463514090387,108.880023085557,52.6615075210605,100.692216658971,30.7924890850699,29.2869811075303,39.9769701907294,56.3841140033983,61.0402256993211,15.7046773691956,34.457382437942,25.7819993825874,25.6589943178604,31.1086768513315,36.9343698088597,47.9717548439659,29.2828459313278,26.1142205069612,25.5969959738447,50.3932107890097,25.2301105872497,31.8213874596222,71.786060797899,11.3545788618828,51.0530307698242,33.3286909524702,18.5997509083376,18.9492007738881,20.3334484198181,81.6296768682961,67.0890611857091,60.1817879804326,71.5961584788712,53.7106984583777,61.2938979897416,76.4657994841744,28.4170118318398,30.2799467076482,15.7542193497168,32.9951256799446,21.7498661539001,40.7090177802996,66.2036325819063,57.2949612950768,45.1891406199872,34.4967597867654,41.2319065474767,22.642541781284,25.3252642803108,45.3279316788174,34.6418252046627,26.9454888802271,64.7970018143357,57.5260394280886,113.912646549295,38.5350117037258,37.5425507845527,40.2174351361631,39.8758254749424,49.2660012897279,34.0152711168834,41.6739039994203|short_description=p1@SMARCC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6599 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11104 | |||
|TSSclassifier=S | |||
|UniProt=Q92922,F8WE13,Q58EY4 | |||
|association_with_transcript=0bp_to_ENST00000254480,ENST00000454240,NM_003074,uc003crq.2_5end | |||
|description=CAGE_peak_1_at_SMARCC1_5end | |||
|id=chr3:47823298..47823423,- | |||
|ontology_enrichment_celltype=CL:0000542!4.66e-08!53;CL:0000051!4.66e-08!53;CL:0000838!1.27e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.66e-08,53;CL:0000051,4.66e-08,53;CL:0000838,1.27e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.72e-23!235;DOID:14566!4.68e-21!239;DOID:2531!1.44e-14!51;DOID:0060083!1.44e-14!51;DOID:0050686!2.67e-14!137;DOID:1240!1.09e-12!39;DOID:3095!1.62e-11!22;DOID:2994!1.62e-11!22;DOID:0050687!2.18e-11!143;DOID:8692!6.06e-10!31;DOID:305!4.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.53e-11;22!DOID:2994;1.53e-11;22!DOID:1240;2.35e-10;39!DOID:8692;8.93e-10;31!DOID:2531;4.55e-09;51!DOID:0060083;4.55e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.72e-23,235;DOID:14566,4.68e-21,239;DOID:2531,1.44e-14,51;DOID:0060083,1.44e-14,51;DOID:0050686,2.67e-14,137;DOID:1240,1.09e-12,39;DOID:3095,1.62e-11,22;DOID:2994,1.62e-11,22;DOID:0050687,2.18e-11,143;DOID:8692,6.06e-10,31;DOID:305,4.49e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@SMARCC1 | |||
}} |
Revision as of 00:25, 13 September 2013
Short description: | p1@SMARCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SMARCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254480, ENST00000454240, NM_003074, uc003crq.2_5end |
EntrezGene: | SMARCC1 |
HGNC: | 11104 |
UniProt: | Q92922F8WE13Q58EY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.66e-08 | 53 |
common lymphoid progenitor | 4.66e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.72e-23 | 235 |
disease of cellular proliferation | 4.68e-21 | 239 |
hematologic cancer | 1.44e-14 | 51 |
immune system cancer | 1.44e-14 | 51 |
organ system cancer | 2.67e-14 | 137 |
leukemia | 1.09e-12 | 39 |
germ cell and embryonal cancer | 1.62e-11 | 22 |
germ cell cancer | 1.62e-11 | 22 |
cell type cancer | 2.18e-11 | 143 |
myeloid leukemia | 6.06e-10 | 31 |
carcinoma | 4.49e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.