FFCP PHASE1:Hg19::chr3:71630844..71630862,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3823|TSSclassifier=W|UniProt=|association_with_transcript=241bp_to_ENST00000498154_5end|coexpression_cluster_id=C47|description=CAGE_peak_40_at_FOXP1_5end|id=chr3:71630844..71630862,-|ontology_enrichment_celltype=CL:0000037!6.36e-27!172;CL:0000566!6.36e-27!172;CL:0000988!6.79e-26!182;CL:0002032!2.96e-23!165;CL:0000837!2.96e-23!165;CL:0000763!1.38e-20!112;CL:0000049!1.38e-20!112;CL:0000738!2.11e-20!140;CL:0002057!1.42e-18!42;CL:0002031!8.50e-17!124;CL:0000860!1.80e-16!45;CL:0002087!3.40e-16!119;CL:0000557!4.45e-16!71;CL:0000766!7.04e-16!76;CL:0000839!1.92e-15!70;CL:0002194!2.21e-12!63;CL:0000576!2.21e-12!63;CL:0000040!2.21e-12!63;CL:0000559!2.21e-12!63;CL:0002009!2.23e-12!65;CL:0000236!2.58e-11!14;CL:0002393!1.88e-09!9;CL:0002397!1.88e-09!9;CL:0000945!2.72e-08!24;CL:0000826!2.72e-08!24;CL:0000134!2.82e-08!358;CL:0002320!8.38e-08!365|ontology_enrichment_celltype_v019=CL:0000236;1.66e-45;13!CL:0000945;1.03e-36;24!CL:0000784;8.91e-13;3!CL:0000875;1.16e-12;3!CL:0002396;1.16e-12;3!CL:0000542;2.96e-12;53!CL:0000226;4.78e-12;3!CL:0000842;4.78e-12;3!CL:0002087;4.99e-11;104!CL:0002393;2.29e-10;6!CL:0002397;2.29e-10;6!CL:0000576;1.55e-09;48!CL:0000738;1.33e-08;136!CL:0000988;4.91e-07;177!CL:0000766;5.46e-07;69|ontology_enrichment_celltype_v019_2=CL:0000236,4.67e-42,14;CL:0000945,1.00e-36,24;CL:0000826,1.00e-36,24;CL:0000037,5.64e-33,168;CL:0002087,3.23e-32,115;CL:0000738,7.05e-32,136;CL:0000988,7.72e-31,177;CL:0002031,1.12e-26,120;CL:0002032,4.79e-24,161;CL:0000837,4.79e-24,161;CL:0002393,4.29e-20,9;CL:0002397,4.29e-20,9;CL:0000860,4.42e-17,42;CL:0002057,4.42e-17,42;CL:0000838,5.87e-15,52;CL:0000542,1.32e-14,53;CL:0000051,1.32e-14,53;CL:0000473,1.60e-14,48;CL:0000234,1.60e-14,48;CL:0000557,3.31e-14,67;CL:0000784,5.74e-13,3;CL:0002194,1.05e-12,59;CL:0000576,1.05e-12,59;CL:0000040,1.05e-12,59;CL:0000559,1.05e-12,59;CL:0000839,1.25e-12,66;CL:0000875,1.45e-12,3;CL:0002396,1.45e-12,3;CL:0002009,3.53e-12,61;CL:0000226,5.50e-12,3;CL:0000842,5.50e-12,3;CL:0000134,1.20e-11,354;CL:0000766,2.81e-11,72;CL:0002320,3.07e-11,361;CL:0000763,1.26e-10,108;CL:0000049,1.26e-10,108;CL:0000219,8.31e-10,386;CL:0000034,6.96e-09,441;CL:0000048,4.66e-08,427;CL:0000723,8.11e-08,433|ontology_enrichment_development_v019=CL:0000051;2.96e-12;53!CL:0002057;3.60e-12;42|ontology_enrichment_disease=DOID:8692!9.02e-07!31|ontology_enrichment_disease_v019=DOID:0060058;8.09e-07;10|ontology_enrichment_disease_v019_2=DOID:0060058,8.11e-07,10|ontology_enrichment_uberon=UBERON:0002390!1.20e-18!102;UBERON:0003061!1.20e-18!102;UBERON:0002193!5.24e-16!112;UBERON:0002371!1.71e-13!80;UBERON:0001474!1.72e-11!86;UBERON:0004765!3.11e-09!101;UBERON:0001434!3.11e-09!101;UBERON:0002405!8.40e-09!115;UBERON:0002384!9.91e-08!375;UBERON:0000178!6.23e-07!15;UBERON:0000179!6.23e-07!15;UBERON:0000463!6.23e-07!15;UBERON:0003081!7.66e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-15;15!UBERON:0000179;1.78e-15;15!UBERON:0000463;1.78e-15;15!UBERON:0002390;9.56e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.42e-22,98;UBERON:0003061,5.42e-22,98;UBERON:0002193,2.22e-19,108;UBERON:0000178,2.37e-15,15;UBERON:0000179,2.37e-15,15;UBERON:0000463,2.37e-15,15;UBERON:0002371,1.24e-13,76;UBERON:0001474,2.49e-12,82;UBERON:0004765,7.26e-11,90;UBERON:0002384,1.10e-10,371;UBERON:0002405,2.21e-10,93;UBERON:0001434,2.28e-09,100;UBERON:0003081,2.95e-08,203|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,3.48602402611357,2.27470771979874,1.46800219667424,0.553995408531877,1.00272223735071,1.73608696572681,0,0,0.257575567634187,0.436194716338694,0,0,0.232429036905685,0.411167888021826,0,0.863077176966451,0.512321413058201,0.945928919554341,0,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,1.92557416245656,0.639337125799041,1.9791078011203,0.598390972864896,1.70489900213078,1.16083695451434,0,0,0.75374599577023,0,1.3031330682307,1.21079900526674,1.47311054395026,0.949387162322653,0.845021145247767,1.06302149982522,1.46761051855863,0.561643155732475,1.05123824989054,0.964353520182481,1.14005097496499,2.58591680358817,2.37463399894024,7.03984977845291,7.64594055766984,7.11607403090844,4.69403244823158,3.60356388332411,6.8970292794538,4.62731410949403,7.63243003628291,9.10740750575117,9.39579502993502,8.41001101875504,2.64342657158052,1.12101712596307,0.526768169550154,0,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,2.62339686735876,3.43196946468077,1.85728750664782,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=241bp_to_ENST00000498154_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_40_at_FOXP1_5end | |||
|id=chr3:71630844..71630862,- | |||
|ontology_enrichment_celltype=CL:0000037!6.36e-27!172;CL:0000566!6.36e-27!172;CL:0000988!6.79e-26!182;CL:0002032!2.96e-23!165;CL:0000837!2.96e-23!165;CL:0000763!1.38e-20!112;CL:0000049!1.38e-20!112;CL:0000738!2.11e-20!140;CL:0002057!1.42e-18!42;CL:0002031!8.50e-17!124;CL:0000860!1.80e-16!45;CL:0002087!3.40e-16!119;CL:0000557!4.45e-16!71;CL:0000766!7.04e-16!76;CL:0000839!1.92e-15!70;CL:0002194!2.21e-12!63;CL:0000576!2.21e-12!63;CL:0000040!2.21e-12!63;CL:0000559!2.21e-12!63;CL:0002009!2.23e-12!65;CL:0000236!2.58e-11!14;CL:0002393!1.88e-09!9;CL:0002397!1.88e-09!9;CL:0000945!2.72e-08!24;CL:0000826!2.72e-08!24;CL:0000134!2.82e-08!358;CL:0002320!8.38e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.66e-45;13!CL:0000945;1.03e-36;24!CL:0000784;8.91e-13;3!CL:0000875;1.16e-12;3!CL:0002396;1.16e-12;3!CL:0000542;2.96e-12;53!CL:0000226;4.78e-12;3!CL:0000842;4.78e-12;3!CL:0002087;4.99e-11;104!CL:0002393;2.29e-10;6!CL:0002397;2.29e-10;6!CL:0000576;1.55e-09;48!CL:0000738;1.33e-08;136!CL:0000988;4.91e-07;177!CL:0000766;5.46e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.67e-42,14;CL:0000945,1.00e-36,24;CL:0000826,1.00e-36,24;CL:0000037,5.64e-33,168;CL:0002087,3.23e-32,115;CL:0000738,7.05e-32,136;CL:0000988,7.72e-31,177;CL:0002031,1.12e-26,120;CL:0002032,4.79e-24,161;CL:0000837,4.79e-24,161;CL:0002393,4.29e-20,9;CL:0002397,4.29e-20,9;CL:0000860,4.42e-17,42;CL:0002057,4.42e-17,42;CL:0000838,5.87e-15,52;CL:0000542,1.32e-14,53;CL:0000051,1.32e-14,53;CL:0000473,1.60e-14,48;CL:0000234,1.60e-14,48;CL:0000557,3.31e-14,67;CL:0000784,5.74e-13,3;CL:0002194,1.05e-12,59;CL:0000576,1.05e-12,59;CL:0000040,1.05e-12,59;CL:0000559,1.05e-12,59;CL:0000839,1.25e-12,66;CL:0000875,1.45e-12,3;CL:0002396,1.45e-12,3;CL:0002009,3.53e-12,61;CL:0000226,5.50e-12,3;CL:0000842,5.50e-12,3;CL:0000134,1.20e-11,354;CL:0000766,2.81e-11,72;CL:0002320,3.07e-11,361;CL:0000763,1.26e-10,108;CL:0000049,1.26e-10,108;CL:0000219,8.31e-10,386;CL:0000034,6.96e-09,441;CL:0000048,4.66e-08,427;CL:0000723,8.11e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000051;2.96e-12;53!CL:0002057;3.60e-12;42 | |||
|ontology_enrichment_disease=DOID:8692!9.02e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.09e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.11e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-18!102;UBERON:0003061!1.20e-18!102;UBERON:0002193!5.24e-16!112;UBERON:0002371!1.71e-13!80;UBERON:0001474!1.72e-11!86;UBERON:0004765!3.11e-09!101;UBERON:0001434!3.11e-09!101;UBERON:0002405!8.40e-09!115;UBERON:0002384!9.91e-08!375;UBERON:0000178!6.23e-07!15;UBERON:0000179!6.23e-07!15;UBERON:0000463!6.23e-07!15;UBERON:0003081!7.66e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-15;15!UBERON:0000179;1.78e-15;15!UBERON:0000463;1.78e-15;15!UBERON:0002390;9.56e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.42e-22,98;UBERON:0003061,5.42e-22,98;UBERON:0002193,2.22e-19,108;UBERON:0000178,2.37e-15,15;UBERON:0000179,2.37e-15,15;UBERON:0000463,2.37e-15,15;UBERON:0002371,1.24e-13,76;UBERON:0001474,2.49e-12,82;UBERON:0004765,7.26e-11,90;UBERON:0002384,1.10e-10,371;UBERON:0002405,2.21e-10,93;UBERON:0001434,2.28e-09,100;UBERON:0003081,2.95e-08,203 | |||
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| |||
|short_description=p40@FOXP1 | |||
}} |
Revision as of 01:19, 13 September 2013
Short description: | p40@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_FOXP1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 241bp_to_ENST00000498154_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.42e-22 | 98 |
blood island | 5.42e-22 | 98 |
hemolymphoid system | 2.22e-19 | 108 |
blood | 2.37e-15 | 15 |
haemolymphatic fluid | 2.37e-15 | 15 |
organism substance | 2.37e-15 | 15 |
bone marrow | 1.24e-13 | 76 |
bone element | 2.49e-12 | 82 |
skeletal element | 7.26e-11 | 90 |
connective tissue | 1.10e-10 | 371 |
immune system | 2.21e-10 | 93 |
skeletal system | 2.28e-09 | 100 |
lateral plate mesoderm | 2.95e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.11e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.