FFCP PHASE1:Hg19::chr3:159557888..159557914,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15678|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000472483_5end|coexpression_cluster_id=C3|description=CAGE_peak_17_at_SCHIP1_5end|id=chr3:159557888..159557914,+|ontology_enrichment_celltype=CL:0000047!4.13e-12!8;CL:0002319!2.19e-10!25;CL:0000133!3.34e-09!59;CL:0000540!3.81e-09!6;CL:0000031!3.81e-09!6;CL:0000404!3.81e-09!6|ontology_enrichment_celltype_v019=CL:0000540;4.32e-08;6!CL:0000404;4.32e-08;6!CL:0002319;6.47e-08;25!CL:0000123;6.82e-08;2!CL:0000242;6.82e-08;2!CL:0000047;1.02e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.42e-13,8;CL:0000540,3.35e-08,6;CL:0000031,3.35e-08,6;CL:0000404,3.35e-08,6;CL:0000242,5.59e-08,2;CL:0002319,5.78e-08,25|ontology_enrichment_development_v019=UBERON:0006601;2.72e-15;82!UBERON:0006215;1.44e-11;3!CL:0000031;4.32e-08;6!UBERON:0010122;1.72e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.19e-66!94;UBERON:0001016!2.19e-66!94;UBERON:0001017!9.27e-64!82;UBERON:0001049!2.51e-63!57;UBERON:0005068!2.51e-63!57;UBERON:0006241!2.51e-63!57;UBERON:0007135!2.51e-63!57;UBERON:0005743!7.94e-62!86;UBERON:0002616!1.92e-53!59;UBERON:0002780!1.64e-50!41;UBERON:0001890!1.64e-50!41;UBERON:0006240!1.64e-50!41;UBERON:0003075!6.02e-50!86;UBERON:0007284!6.02e-50!86;UBERON:0000955!2.43e-49!69;UBERON:0006238!2.43e-49!69;UBERON:0003080!5.30e-49!42;UBERON:0002346!7.53e-47!90;UBERON:0001893!1.59e-43!34;UBERON:0002020!2.04e-43!34;UBERON:0003528!2.04e-43!34;UBERON:0002791!5.34e-42!33;UBERON:0004121!3.30e-41!169;UBERON:0001869!3.64e-41!32;UBERON:0003056!2.05e-40!61;UBERON:0000924!1.11e-39!173;UBERON:0006601!1.11e-39!173;UBERON:0007023!6.79e-38!115;UBERON:0000956!4.16e-31!25;UBERON:0000203!4.16e-31!25;UBERON:0000033!2.19e-30!123;UBERON:0000153!2.95e-30!129;UBERON:0007811!2.95e-30!129;UBERON:0002619!6.93e-28!22;UBERON:0001950!4.51e-25!20;UBERON:0003076!6.88e-15!15;UBERON:0003057!6.88e-15!15;UBERON:0002308!1.25e-13!9;UBERON:0000125!1.25e-13!9;UBERON:0000025!8.24e-12!194;UBERON:0004733!8.53e-12!12;UBERON:0002028!8.53e-12!12;UBERON:0007277!8.53e-12!12;UBERON:0009663!4.27e-11!7;UBERON:0002420!6.66e-11!9;UBERON:0007245!6.66e-11!9;UBERON:0010009!6.66e-11!9;UBERON:0010011!6.66e-11!9;UBERON:0000454!6.66e-11!9;UBERON:0000200!9.80e-11!6;UBERON:0004732!1.10e-10!13;UBERON:0000064!4.89e-09!219;UBERON:0000922!7.56e-09!612;UBERON:0001872!8.48e-09!5;UBERON:0002298!8.85e-09!8;UBERON:0000483!1.38e-08!309;UBERON:0002021!2.09e-08!5;UBERON:0000119!2.50e-08!312;UBERON:0001894!2.70e-08!7;UBERON:0006222!2.70e-08!7;UBERON:0004111!3.18e-08!241;UBERON:0002680!3.18e-08!9;UBERON:0001895!3.18e-08!9;UBERON:0010092!3.18e-08!9;UBERON:0000468!1.26e-07!659;UBERON:0000369!2.25e-07!4;UBERON:0002435!2.25e-07!4;UBERON:0000204!2.25e-07!4;UBERON:0010082!2.25e-07!4;UBERON:0001871!3.54e-07!7;UBERON:0000475!9.67e-07!365|ontology_enrichment_uberon_v019=UBERON:0001869;1.77e-57;32!UBERON:0003528;1.19e-53;34!UBERON:0002020;1.19e-53;34!UBERON:0002791;1.75e-53;32!UBERON:0001893;1.19e-51;34!UBERON:0002619;2.73e-51;22!UBERON:0002780;1.24e-49;41!UBERON:0001890;1.24e-49;41!UBERON:0000956;1.38e-49;25!UBERON:0000203;1.38e-49;25!UBERON:0000073;1.01e-45;53!UBERON:0002616;1.01e-45;53!UBERON:0001950;1.67e-45;20!UBERON:0000955;8.12e-34;68!UBERON:0001017;1.26e-31;75!UBERON:0001016;8.61e-27;83!UBERON:0000200;4.97e-20;6!UBERON:0001872;2.46e-16;5!UBERON:0002021;2.78e-15;5!UBERON:0000369;1.56e-13;4!UBERON:0002435;1.56e-13;4!UBERON:0000204;1.56e-13;4!UBERON:0002420;8.67e-13;9!UBERON:0000125;8.67e-13;9!UBERON:0007245;8.67e-13;9!UBERON:0002308;8.67e-13;9!UBERON:0010009;8.67e-13;9!UBERON:0010011;8.67e-13;9!UBERON:0000454;8.67e-13;9!UBERON:0004733;1.74e-12;12!UBERON:0002028;1.74e-12;12!UBERON:0007023;5.17e-12;114!UBERON:0009663;8.59e-12;7!UBERON:0001894;1.15e-11;7!UBERON:0004732;1.92e-11;13!UBERON:0001870;5.91e-11;3!UBERON:0000349;7.84e-11;5!UBERON:0011216;1.72e-10;132!UBERON:0005383;2.08e-10;3!UBERON:0005382;2.08e-10;3!UBERON:0002680;2.77e-09;9!UBERON:0001895;2.77e-09;9!UBERON:0002298;2.77e-08;6!UBERON:0000007;4.33e-08;2!UBERON:0002771;6.82e-08;2!UBERON:0002702;8.20e-08;2!UBERON:0001871;1.18e-07;6!UBERON:0001897;1.72e-07;2!UBERON:0001873;1.72e-07;2!UBERON:0001954;1.72e-07;2!UBERON:0003022;1.72e-07;2!UBERON:0002421;1.72e-07;2!UBERON:0010225;1.72e-07;2!UBERON:0002600;1.72e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.83e-84,89;UBERON:0001017,6.49e-83,81;UBERON:0000073,2.82e-82,53;UBERON:0002616,2.82e-82,53;UBERON:0001049,2.09e-77,56;UBERON:0005068,2.09e-77,56;UBERON:0006241,2.09e-77,56;UBERON:0007135,2.09e-77,56;UBERON:0000955,3.18e-72,68;UBERON:0006238,3.18e-72,68;UBERON:0002780,2.24e-71,41;UBERON:0001890,2.24e-71,41;UBERON:0003080,2.24e-71,41;UBERON:0006240,2.24e-71,41;UBERON:0001869,4.41e-65,32;UBERON:0001893,6.19e-61,34;UBERON:0003528,9.89e-61,34;UBERON:0002020,9.89e-61,34;UBERON:0002791,5.56e-60,32;UBERON:0003075,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000472483_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_17_at_SCHIP1_5end | |||
|id=chr3:159557888..159557914,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.13e-12!8;CL:0002319!2.19e-10!25;CL:0000133!3.34e-09!59;CL:0000540!3.81e-09!6;CL:0000031!3.81e-09!6;CL:0000404!3.81e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.32e-08;6!CL:0000404;4.32e-08;6!CL:0002319;6.47e-08;25!CL:0000123;6.82e-08;2!CL:0000242;6.82e-08;2!CL:0000047;1.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.42e-13,8;CL:0000540,3.35e-08,6;CL:0000031,3.35e-08,6;CL:0000404,3.35e-08,6;CL:0000242,5.59e-08,2;CL:0002319,5.78e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.72e-15;82!UBERON:0006215;1.44e-11;3!CL:0000031;4.32e-08;6!UBERON:0010122;1.72e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,2.0036519099174,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.665188192387692,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.795178609928912,0.580969714347592,0.725627385107593,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0.088048434013226,0.207328115540772,0.720599767084807,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,2.60279707715243,0.773288812777695,1.50764638800914,1.91381625495949,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54008299268659,0,2.52717460302113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,2.53204949538923,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,3.87733098438087,3.6179558283122,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,2.65722415744152,2.17073589525734,7.62908681585416,5.41838373663001,5.6154047601174,2.4132393686937,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.876214728748802,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,3.10222900183806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.821432273351958,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,4.77137813885582,1.22583065500418,0.964518890790115,1.51293380256957,1.24632101408756,0,0,2.61223093629506,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.92562821219883,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,4.43034089983493,6.22333951000012,2.6290095448365,1.72022758707021,0.887432412294818,1.1177352529449,0,0,0,0,0,6.08835377548946,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42999305476938,1.40172254815686,0.629063767423586,3.38549878395243,0,0,0,0,0,0,0.80057074828547,0,0,3.14723202972652,1.41696576325585,1.75597244962866,2.87162909937057,1.51243017733031,2.35134658378341,2.90656162137332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90411613859097,3.12431239445539,2.48024155801421,2.47321659756237,1.64092442705466,0,0,0,0,0,0.672567444437648,3.03482802118316,5.00856820972855,0,0.115233987555779,0,1.35939465953663,3.02554758389106,0,0,0.078493092850514,2.19961825882403,0,0,0,0,0.285906176706625,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0.647428837187895,1.12929087541872,0,0.485710993059139,0,1.39265542612958,0.118920090777569,0,0.109940516745429,0.754814217833368,0.0771741581079447,0,0,0,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.716697915757256,0,1.8357702351547,0.872701380680755,0,0,0,0,0.756998549010474,0,0,0.509944148709909,0.801652215796681,0.18378979906969,0,0.0757786982182394,0.535928260312357,4.97501663675268,1.03432995861895,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@SCHIP1 | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p17@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_SCHIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000472483_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.42e-13 | 8 |
neuron | 3.35e-08 | 6 |
neuroblast | 3.35e-08 | 6 |
electrically signaling cell | 3.35e-08 | 6 |
Merkel cell | 5.59e-08 | 2 |
neural cell | 5.78e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.