FFCP PHASE1:Hg19::chr4:101439116..101439130,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51705|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16041|TSSclassifier=S|UniProt=|association_with_transcript=24bp_to_ENST00000502744_5end|coexpression_cluster_id=C856|description=CAGE_peak_2_at_EMCN_5end|id=chr4:101439116..101439130,-|ontology_enrichment_celltype=CL:0002139!3.25e-22!24;CL:0000071!9.31e-16!18;CL:0002546!9.31e-16!18;CL:0000115!1.69e-15!35;CL:0002078!1.38e-10!44;CL:0005020!3.98e-08!6;CL:0002138!3.98e-08!6;CL:0005022!3.98e-08!6;CL:1000413!1.69e-07!9;CL:0002543!6.09e-07!6|ontology_enrichment_celltype_v019=CL:0002139;1.13e-25;24!CL:0000071;4.22e-17;18!CL:0000115;8.46e-15;36!CL:0002138;1.68e-10;6!CL:0002078;2.19e-09;45!CL:1000413;4.25e-08;9!CL:0002544;5.57e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,8.09e-26,24;CL:0000115,2.14e-18,36;CL:0000071,3.60e-17,18;CL:0002546,3.60e-17,18;CL:0002078,2.70e-13,45;CL:0005020,1.37e-10,6;CL:0002138,1.37e-10,6;CL:0005022,1.37e-10,6;CL:0000213,7.65e-09,58;CL:0000215,7.65e-09,58;CL:1000413,4.29e-08,9;CL:0002544,5.34e-07,6;CL:0002543,9.49e-07,6|ontology_enrichment_development_v019=CL:0002546;4.22e-17;18!CL:0005022;1.68e-10;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.03e-65!115;UBERON:0004111!1.52e-25!241;UBERON:0000477!2.09e-23!286;UBERON:0001049!2.29e-23!57;UBERON:0005068!2.29e-23!57;UBERON:0006241!2.29e-23!57;UBERON:0007135!2.29e-23!57;UBERON:0000025!2.89e-22!194;UBERON:0002616!2.01e-20!59;UBERON:0003080!2.24e-18!42;UBERON:0003075!7.55e-18!86;UBERON:0007284!7.55e-18!86;UBERON:0002780!1.49e-17!41;UBERON:0001890!1.49e-17!41;UBERON:0006240!1.49e-17!41;UBERON:0002346!4.32e-17!90;UBERON:0001017!3.46e-16!82;UBERON:0000955!4.15e-16!69;UBERON:0006238!4.15e-16!69;UBERON:0005743!8.12e-16!86;UBERON:0001986!9.31e-16!18;UBERON:0004638!9.31e-16!18;UBERON:0004852!9.31e-16!18;UBERON:0002020!5.69e-15!34;UBERON:0003528!5.69e-15!34;UBERON:0001893!1.13e-14!34;UBERON:0000073!1.57e-14!94;UBERON:0001016!1.57e-14!94;UBERON:0002791!3.47e-14!33;UBERON:0001869!1.36e-13!32;UBERON:0000468!2.83e-12!659;UBERON:0000487!7.81e-12!22;UBERON:0000119!1.42e-11!312;UBERON:0000483!1.50e-11!309;UBERON:0002619!2.07e-11!22;UBERON:0000055!1.41e-10!69;UBERON:0003056!1.43e-10!61;UBERON:0000467!2.01e-10!625;UBERON:0000153!2.13e-10!129;UBERON:0007811!2.13e-10!129;UBERON:0001950!2.35e-10!20;UBERON:0000480!2.47e-10!626;UBERON:0004872!3.86e-10!84;UBERON:0001009!7.73e-10!113;UBERON:0006914!9.43e-10!25;UBERON:0000956!1.87e-09!25;UBERON:0000203!1.87e-09!25;UBERON:0002049!3.08e-09!79;UBERON:0007798!3.08e-09!79;UBERON:0000033!4.60e-09!123;UBERON:0004535!1.51e-08!110;UBERON:0007100!6.35e-08!27;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0003103!1.55e-07!69;UBERON:0003915!1.69e-07!9;UBERON:0004700!1.69e-07!9;UBERON:0001917!1.69e-07!9;UBERON:0004121!1.75e-07!169;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0002420!2.12e-07!9;UBERON:0007245!2.12e-07!9;UBERON:0010009!2.12e-07!9;UBERON:0010011!2.12e-07!9;UBERON:0000454!2.12e-07!9;UBERON:0000924!2.55e-07!173;UBERON:0006601!2.55e-07!173;UBERON:0002298!2.68e-07!8;UBERON:0002465!4.20e-07!10;UBERON:0000062!5.89e-07!511|ontology_enrichment_uberon_v019=UBERON:0004638;4.22e-17;18!UBERON:0001986;4.22e-17;18!UBERON:0004852;4.22e-17;18!UBERON:0000487;3.43e-13;22!UBERON:0006914;4.24e-11;25!UBERON:0007023;1.61e-10;114!UBERON:0002465;1.83e-09;10!UBERON:0003915;4.25e-08;9!UBERON:0004700;4.25e-08;9!UBERON:0001917;4.25e-08;9!UBERON:0001473;1.33e-07;8!UBERON:0004536;1.33e-07;8!UBERON:0006558;1.33e-07;8!UBERON:0000055;2.35e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.42e-45,114;UBERON:0004111,4.31e-19,240;UBERON:0004638,3.60e-17,18;UBERON:0001986,3.60e-17,18;UBERON:0004852,3.60e-17,18;UBERON:0000025,5.14e-14,192;UBERON:0000487,3.02e-13,22;UBERON:0000055,5.65e-13,68;UBERON:0006914,3.80e-11,25;UBERON:0002049,4.36e-11,78;UBERON:0007798,4.36e-11,78;UBERON:0001009,9.33e-11,112;UBERON:0004535,9.10e-10,109;UBERON:0002465,1.54e-09,10;UBERON:0010314,3.26e-09,132;UBERON:0007500,6.37e-09,59;UBERON:0001981,6.37e-09,59;UBERON:0004537,6.37e-09,59;UBERON:0006965,6.37e-09,59;UBERON:0004872,6.77e-09,83;UBERON:0003103,2.22e-08,68;UBERON:0000483,2.58e-08,306;UBERON:0001049,3.17e-08,56;UBERON:0005068,3.17e-08,56;UBERON:0006241,3.17e-08,56;UBERON:0007135,3.17e-08,56;UBERON:0003915,4.29e-08,9;UBERON:0004700,4.29e-08,9;UBERON:0001917,4.29e-08,9;UBERON:0000119,4.55e-08,309;UBERON:0003075,7.04e-08,82;UBERON:0007284,7.04e-08,82;UBERON:0001473,1.15e-07,8;UBERON:0004536,1.15e-07,8;UBERON:0006558,1.15e-07,8;UBERON:0003914,2.58e-07,117;UBERON:0002346,3.46e-07,86;UBERON:0011216,6.31e-07,223|phase1_expression=0.908391896352783,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000502744_5end | |||
|coexpression_cluster_id=C856 | |||
|description=CAGE_peak_2_at_EMCN_5end | |||
|id=chr4:101439116..101439130,- | |||
|ontology_enrichment_celltype=CL:0002139!3.25e-22!24;CL:0000071!9.31e-16!18;CL:0002546!9.31e-16!18;CL:0000115!1.69e-15!35;CL:0002078!1.38e-10!44;CL:0005020!3.98e-08!6;CL:0002138!3.98e-08!6;CL:0005022!3.98e-08!6;CL:1000413!1.69e-07!9;CL:0002543!6.09e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.13e-25;24!CL:0000071;4.22e-17;18!CL:0000115;8.46e-15;36!CL:0002138;1.68e-10;6!CL:0002078;2.19e-09;45!CL:1000413;4.25e-08;9!CL:0002544;5.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.09e-26,24;CL:0000115,2.14e-18,36;CL:0000071,3.60e-17,18;CL:0002546,3.60e-17,18;CL:0002078,2.70e-13,45;CL:0005020,1.37e-10,6;CL:0002138,1.37e-10,6;CL:0005022,1.37e-10,6;CL:0000213,7.65e-09,58;CL:0000215,7.65e-09,58;CL:1000413,4.29e-08,9;CL:0002544,5.34e-07,6;CL:0002543,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.22e-17;18!CL:0005022;1.68e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.03e-65!115;UBERON:0004111!1.52e-25!241;UBERON:0000477!2.09e-23!286;UBERON:0001049!2.29e-23!57;UBERON:0005068!2.29e-23!57;UBERON:0006241!2.29e-23!57;UBERON:0007135!2.29e-23!57;UBERON:0000025!2.89e-22!194;UBERON:0002616!2.01e-20!59;UBERON:0003080!2.24e-18!42;UBERON:0003075!7.55e-18!86;UBERON:0007284!7.55e-18!86;UBERON:0002780!1.49e-17!41;UBERON:0001890!1.49e-17!41;UBERON:0006240!1.49e-17!41;UBERON:0002346!4.32e-17!90;UBERON:0001017!3.46e-16!82;UBERON:0000955!4.15e-16!69;UBERON:0006238!4.15e-16!69;UBERON:0005743!8.12e-16!86;UBERON:0001986!9.31e-16!18;UBERON:0004638!9.31e-16!18;UBERON:0004852!9.31e-16!18;UBERON:0002020!5.69e-15!34;UBERON:0003528!5.69e-15!34;UBERON:0001893!1.13e-14!34;UBERON:0000073!1.57e-14!94;UBERON:0001016!1.57e-14!94;UBERON:0002791!3.47e-14!33;UBERON:0001869!1.36e-13!32;UBERON:0000468!2.83e-12!659;UBERON:0000487!7.81e-12!22;UBERON:0000119!1.42e-11!312;UBERON:0000483!1.50e-11!309;UBERON:0002619!2.07e-11!22;UBERON:0000055!1.41e-10!69;UBERON:0003056!1.43e-10!61;UBERON:0000467!2.01e-10!625;UBERON:0000153!2.13e-10!129;UBERON:0007811!2.13e-10!129;UBERON:0001950!2.35e-10!20;UBERON:0000480!2.47e-10!626;UBERON:0004872!3.86e-10!84;UBERON:0001009!7.73e-10!113;UBERON:0006914!9.43e-10!25;UBERON:0000956!1.87e-09!25;UBERON:0000203!1.87e-09!25;UBERON:0002049!3.08e-09!79;UBERON:0007798!3.08e-09!79;UBERON:0000033!4.60e-09!123;UBERON:0004535!1.51e-08!110;UBERON:0007100!6.35e-08!27;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0003103!1.55e-07!69;UBERON:0003915!1.69e-07!9;UBERON:0004700!1.69e-07!9;UBERON:0001917!1.69e-07!9;UBERON:0004121!1.75e-07!169;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0002420!2.12e-07!9;UBERON:0007245!2.12e-07!9;UBERON:0010009!2.12e-07!9;UBERON:0010011!2.12e-07!9;UBERON:0000454!2.12e-07!9;UBERON:0000924!2.55e-07!173;UBERON:0006601!2.55e-07!173;UBERON:0002298!2.68e-07!8;UBERON:0002465!4.20e-07!10;UBERON:0000062!5.89e-07!511 | |||
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|short_description=p2@EMCN | |||
}} |
Revision as of 01:47, 13 September 2013
Short description: | p2@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EMCN_5end |
Coexpression cluster: | C856_Endothelial_lung_diaphragm_left_kidney_heart_Hepatic |
Association with transcript: | 24bp_to_ENST00000502744_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.09e-26 | 24 |
endothelial cell | 2.14e-18 | 36 |
blood vessel endothelial cell | 3.60e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.60e-17 | 18 |
meso-epithelial cell | 2.70e-13 | 45 |
lymphangioblast | 1.37e-10 | 6 |
endothelial cell of lymphatic vessel | 1.37e-10 | 6 |
vascular lymphangioblast | 1.37e-10 | 6 |
lining cell | 7.65e-09 | 58 |
barrier cell | 7.65e-09 | 58 |
endothelial cell of artery | 4.29e-08 | 9 |
aortic endothelial cell | 5.34e-07 | 6 |
vein endothelial cell | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.