FFCP PHASE1:Hg19::chr5:156696414..156696428,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26999|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13760|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000518456_5end|coexpression_cluster_id=C2|description=CAGE_peak_17_at_CYFIP2_5end|id=chr5:156696414..156696428,+|ontology_enrichment_celltype=CL:0000860!3.73e-45!45;CL:0002057!9.73e-43!42;CL:0000766!4.92e-40!76;CL:0000738!2.91e-34!140;CL:0002009!6.77e-30!65;CL:0002194!5.11e-29!63;CL:0000576!5.11e-29!63;CL:0000040!5.11e-29!63;CL:0000559!5.11e-29!63;CL:0000763!2.36e-28!112;CL:0000049!2.36e-28!112;CL:0000037!5.16e-28!172;CL:0000566!5.16e-28!172;CL:0002032!4.79e-27!165;CL:0000837!4.79e-27!165;CL:0000557!1.25e-26!71;CL:0002087!5.72e-26!119;CL:0000988!1.07e-25!182;CL:0000839!2.86e-25!70;CL:0002031!1.51e-21!124;CL:0000094!1.99e-21!8;CL:0000081!4.15e-15!11;CL:0002393!4.54e-14!9;CL:0002397!4.54e-14!9;CL:0000875!2.85e-09!3;CL:0002396!2.85e-09!3;CL:0000775!3.09e-09!3;CL:0000767!8.97e-09!3;CL:0000134!1.36e-07!358;CL:0002320!3.32e-07!365;CL:0000771!8.32e-07!2|ontology_enrichment_celltype_v019=CL:0000094;4.88e-56;8!CL:0000081;9.80e-41;11!CL:0000875;1.96e-38;3!CL:0002396;1.96e-38;3!CL:0000775;3.26e-38;3!CL:0000771;1.29e-26;2!CL:0000766;2.44e-12;69!CL:0002393;3.14e-09;6!CL:0002397;3.14e-09;6!CL:0000576;1.02e-07;48!CL:0000763;2.74e-07;100|ontology_enrichment_celltype_v019_2=CL:0000094,5.90e-56,8;CL:0000081,1.13e-40,11;CL:0000875,2.09e-38,3;CL:0002396,2.09e-38,3;CL:0000775,3.06e-38,3;CL:0002393,1.07e-34,9;CL:0002397,1.07e-34,9;CL:0000766,2.75e-27,72;CL:0000771,1.29e-26,2;CL:0000763,9.01e-18,108;CL:0000049,9.01e-18,108;CL:0000738,3.62e-16,136;CL:0000860,6.08e-14,42;CL:0002057,6.08e-14,42;CL:0002032,2.08e-13,161;CL:0000837,2.08e-13,161;CL:0000037,8.81e-13,168;CL:0000473,3.95e-12,48;CL:0000234,3.95e-12,48;CL:0000988,4.78e-12,177;CL:0002194,1.38e-09,59;CL:0000576,1.38e-09,59;CL:0000040,1.38e-09,59;CL:0000559,1.38e-09,59;CL:0002009,2.94e-09,61;CL:0000839,1.60e-08,66;CL:0000557,2.19e-08,67|ontology_enrichment_development_v019=CL:0002057;2.58e-10;42!CL:0000049;4.54e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;1.51e-13;1|ontology_enrichment_disease_v019_2=DOID:12603,1.42e-13,1|ontology_enrichment_uberon=UBERON:0002390!1.79e-31!102;UBERON:0003061!1.79e-31!102;UBERON:0002193!1.23e-27!112;UBERON:0002371!1.18e-22!80;UBERON:0001474!1.81e-20!86;UBERON:0004765!3.69e-16!101;UBERON:0001434!3.69e-16!101;UBERON:0002405!2.72e-15!115;UBERON:0003081!3.32e-11!216;UBERON:0000178!7.30e-10!15;UBERON:0000179!7.30e-10!15;UBERON:0000463!7.30e-10!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.03e-09,98;UBERON:0003061,4.03e-09,98;UBERON:0002193,3.46e-08,108;UBERON:0002371,2.47e-07,76;UBERON:0001474,9.32e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,2.5350634357433,2.33864729961548,0.838634582033504,0.112328631146495,0.150176892841506,0,6.27028036230747,7.75775041076451,8.03722276564389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,5.99205619157746,5.9832291840805,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.952927101831156,0.822724546172388,1.29694662238543,1.62009431171434,0,0,0,0,1.30062222588003,0,0.0711418433484141,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3494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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000518456_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_17_at_CYFIP2_5end | |||
|id=chr5:156696414..156696428,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.73e-45!45;CL:0002057!9.73e-43!42;CL:0000766!4.92e-40!76;CL:0000738!2.91e-34!140;CL:0002009!6.77e-30!65;CL:0002194!5.11e-29!63;CL:0000576!5.11e-29!63;CL:0000040!5.11e-29!63;CL:0000559!5.11e-29!63;CL:0000763!2.36e-28!112;CL:0000049!2.36e-28!112;CL:0000037!5.16e-28!172;CL:0000566!5.16e-28!172;CL:0002032!4.79e-27!165;CL:0000837!4.79e-27!165;CL:0000557!1.25e-26!71;CL:0002087!5.72e-26!119;CL:0000988!1.07e-25!182;CL:0000839!2.86e-25!70;CL:0002031!1.51e-21!124;CL:0000094!1.99e-21!8;CL:0000081!4.15e-15!11;CL:0002393!4.54e-14!9;CL:0002397!4.54e-14!9;CL:0000875!2.85e-09!3;CL:0002396!2.85e-09!3;CL:0000775!3.09e-09!3;CL:0000767!8.97e-09!3;CL:0000134!1.36e-07!358;CL:0002320!3.32e-07!365;CL:0000771!8.32e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.88e-56;8!CL:0000081;9.80e-41;11!CL:0000875;1.96e-38;3!CL:0002396;1.96e-38;3!CL:0000775;3.26e-38;3!CL:0000771;1.29e-26;2!CL:0000766;2.44e-12;69!CL:0002393;3.14e-09;6!CL:0002397;3.14e-09;6!CL:0000576;1.02e-07;48!CL:0000763;2.74e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.90e-56,8;CL:0000081,1.13e-40,11;CL:0000875,2.09e-38,3;CL:0002396,2.09e-38,3;CL:0000775,3.06e-38,3;CL:0002393,1.07e-34,9;CL:0002397,1.07e-34,9;CL:0000766,2.75e-27,72;CL:0000771,1.29e-26,2;CL:0000763,9.01e-18,108;CL:0000049,9.01e-18,108;CL:0000738,3.62e-16,136;CL:0000860,6.08e-14,42;CL:0002057,6.08e-14,42;CL:0002032,2.08e-13,161;CL:0000837,2.08e-13,161;CL:0000037,8.81e-13,168;CL:0000473,3.95e-12,48;CL:0000234,3.95e-12,48;CL:0000988,4.78e-12,177;CL:0002194,1.38e-09,59;CL:0000576,1.38e-09,59;CL:0000040,1.38e-09,59;CL:0000559,1.38e-09,59;CL:0002009,2.94e-09,61;CL:0000839,1.60e-08,66;CL:0000557,2.19e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-10;42!CL:0000049;4.54e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.51e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.42e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-31!102;UBERON:0003061!1.79e-31!102;UBERON:0002193!1.23e-27!112;UBERON:0002371!1.18e-22!80;UBERON:0001474!1.81e-20!86;UBERON:0004765!3.69e-16!101;UBERON:0001434!3.69e-16!101;UBERON:0002405!2.72e-15!115;UBERON:0003081!3.32e-11!216;UBERON:0000178!7.30e-10!15;UBERON:0000179!7.30e-10!15;UBERON:0000463!7.30e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.03e-09,98;UBERON:0003061,4.03e-09,98;UBERON:0002193,3.46e-08,108;UBERON:0002371,2.47e-07,76;UBERON:0001474,9.32e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,2.5350634357433,2.33864729961548,0.838634582033504,0.112328631146495,0.150176892841506,0,6.27028036230747,7.75775041076451,8.03722276564389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,5.99205619157746,5.9832291840805,8.28831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.952927101831156,0.822724546172388,1.29694662238543,1.62009431171434,0,0,0,0,1.30062222588003,0,0.0711418433484141,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.19351266257817,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.709251365692784,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@CYFIP2 | |||
}} |
Revision as of 14:24, 13 September 2013
Short description: | p17@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_CYFIP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 29bp_to_ENST00000518456_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.90e-56 | 8 |
blood cell | 1.13e-40 | 11 |
non-classical monocyte | 2.09e-38 | 3 |
CD14-low, CD16-positive monocyte | 2.09e-38 | 3 |
neutrophil | 3.06e-38 | 3 |
intermediate monocyte | 1.07e-34 | 9 |
CD14-positive, CD16-positive monocyte | 1.07e-34 | 9 |
myeloid leukocyte | 2.75e-27 | 72 |
eosinophil | 1.29e-26 | 2 |
myeloid cell | 9.01e-18 | 108 |
common myeloid progenitor | 9.01e-18 | 108 |
leukocyte | 3.62e-16 | 136 |
classical monocyte | 6.08e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.08e-14 | 42 |
hematopoietic oligopotent progenitor cell | 2.08e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-13 | 161 |
hematopoietic stem cell | 8.81e-13 | 168 |
defensive cell | 3.95e-12 | 48 |
phagocyte | 3.95e-12 | 48 |
hematopoietic cell | 4.78e-12 | 177 |
monopoietic cell | 1.38e-09 | 59 |
monocyte | 1.38e-09 | 59 |
monoblast | 1.38e-09 | 59 |
promonocyte | 1.38e-09 | 59 |
macrophage dendritic cell progenitor | 2.94e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-08 | 66 |
granulocyte monocyte progenitor cell | 2.19e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.03e-09 | 98 |
blood island | 4.03e-09 | 98 |
hemolymphoid system | 3.46e-08 | 108 |
bone marrow | 2.47e-07 | 76 |
bone element | 9.32e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.42e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.