FFCP PHASE1:Hg19::chr6:30844192..30844209,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=780|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2730|TSSclassifier=S|UniProt=D6RB82|association_with_transcript=0bp_to_ENST00000502955_5end|coexpression_cluster_id=C3783|description=CAGE_peak_40_at_DDR1_5end|id=chr6:30844192..30844209,+|ontology_enrichment_celltype=CL:0002076!1.24e-23!43;CL:0002251!4.84e-22!21;CL:0000223!4.09e-16!59;CL:0002621!4.52e-13!3|ontology_enrichment_celltype_v019=CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0002251;5.81e-12;20!CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4|ontology_enrichment_celltype_v019_2=CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0002251,5.92e-12,20;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4;CL:0000076,9.99e-07,63|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!1.52e-10!14|ontology_enrichment_disease_v019=DOID:3151;8.64e-26;1!DOID:3149;8.64e-26;1!DOID:1749;1.05e-16;14!DOID:3451;1.29e-13;2!DOID:4159;1.29e-13;2!DOID:0060122;1.29e-13;2|ontology_enrichment_disease_v019_2=DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:1749,1.08e-16,14;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2|ontology_enrichment_uberon=UBERON:0003729!3.77e-14!5;UBERON:0001949!4.52e-13!3;UBERON:0003343!1.71e-10!4;UBERON:0004785!1.71e-10!4;UBERON:0000974!4.28e-10!10;UBERON:0000161!6.00e-10!35;UBERON:0000166!5.26e-09!21;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0004119!3.06e-07!169;UBERON:0000925!3.06e-07!169;UBERON:0006595!3.06e-07!169;UBERON:0001004!9.58e-07!72|ontology_enrichment_uberon_v019=UBERON:0003343;5.23e-26;4!UBERON:0004785;5.23e-26;4!UBERON:0000974;1.03e-17;6!UBERON:0006562;8.82e-14;2!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0002106;1.24e-09;3!UBERON:0003729;1.04e-08;13!UBERON:0000014;1.86e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.23e-26,4;UBERON:0004785,5.23e-26,4;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0000974,4.89e-11,10;UBERON:0002106,1.19e-09,3;UBERON:0004854,1.19e-09,3;UBERON:0009034,1.19e-09,3;UBERON:0002095,1.19e-09,3;UBERON:0004782,1.19e-09,3;UBERON:0003281,1.19e-09,3;UBERON:0009664,1.19e-09,3;UBERON:0002296,1.19e-09,3;UBERON:0005602,1.19e-09,3;UBERON:0001179,1.19e-09,3;UBERON:0006293,1.19e-09,3;UBERON:0003729,1.04e-08,13;UBERON:0000014,2.04e-07,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96848801357282,0.353909170043221,4.03542916747694,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |||
|TSSclassifier=S | |||
|UniProt=D6RB82 | |||
|association_with_transcript=0bp_to_ENST00000502955_5end | |||
|coexpression_cluster_id=C3783 | |||
|description=CAGE_peak_40_at_DDR1_5end | |||
|id=chr6:30844192..30844209,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.24e-23!43;CL:0002251!4.84e-22!21;CL:0000223!4.09e-16!59;CL:0002621!4.52e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0002251;5.81e-12;20!CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0002251,5.92e-12,20;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4;CL:0000076,9.99e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.52e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.64e-26;1!DOID:3149;8.64e-26;1!DOID:1749;1.05e-16;14!DOID:3451;1.29e-13;2!DOID:4159;1.29e-13;2!DOID:0060122;1.29e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:1749,1.08e-16,14;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.77e-14!5;UBERON:0001949!4.52e-13!3;UBERON:0003343!1.71e-10!4;UBERON:0004785!1.71e-10!4;UBERON:0000974!4.28e-10!10;UBERON:0000161!6.00e-10!35;UBERON:0000166!5.26e-09!21;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0004119!3.06e-07!169;UBERON:0000925!3.06e-07!169;UBERON:0006595!3.06e-07!169;UBERON:0001004!9.58e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.23e-26;4!UBERON:0004785;5.23e-26;4!UBERON:0000974;1.03e-17;6!UBERON:0006562;8.82e-14;2!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0002106;1.24e-09;3!UBERON:0003729;1.04e-08;13!UBERON:0000014;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.23e-26,4;UBERON:0004785,5.23e-26,4;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0000974,4.89e-11,10;UBERON:0002106,1.19e-09,3;UBERON:0004854,1.19e-09,3;UBERON:0009034,1.19e-09,3;UBERON:0002095,1.19e-09,3;UBERON:0004782,1.19e-09,3;UBERON:0003281,1.19e-09,3;UBERON:0009664,1.19e-09,3;UBERON:0002296,1.19e-09,3;UBERON:0005602,1.19e-09,3;UBERON:0001179,1.19e-09,3;UBERON:0006293,1.19e-09,3;UBERON:0003729,1.04e-08,13;UBERON:0000014,2.04e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96848801357282,0.353909170043221,4.03542916747694,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04419884223352,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49852889812322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p40@DDR1 | |||
}} |
Revision as of 20:06, 13 September 2013
Short description: | p40@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_DDR1_5end |
Coexpression cluster: | C3783_oral_cervical_malignant_keratoacanthoma_splenic_glassy_pharyngeal |
Association with transcript: | 0bp_to_ENST00000502955_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | D6RB82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.21e-13 | 2 |
epithelial cell of sweat gland | 1.21e-13 | 2 |
epithelial cell of skin gland | 1.21e-13 | 2 |
acinar cell of sebaceous gland | 1.21e-13 | 2 |
epithelial cell of alimentary canal | 5.92e-12 | 20 |
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
squamous epithelial cell | 9.99e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.23e-26 | 4 |
respiratory system mucosa | 5.23e-26 | 4 |
skin gland | 1.21e-13 | 2 |
epidermis gland | 1.21e-13 | 2 |
gland of integumental system | 1.21e-13 | 2 |
sebaceous gland | 1.21e-13 | 2 |
skin sebaceous gland | 1.21e-13 | 2 |
sweat gland | 1.21e-13 | 2 |
sweat gland placode | 1.21e-13 | 2 |
sebaceous gland placode | 1.21e-13 | 2 |
neck | 4.89e-11 | 10 |
spleen | 1.19e-09 | 3 |
gastrointestinal system mesentery | 1.19e-09 | 3 |
stomach region | 1.19e-09 | 3 |
mesentery | 1.19e-09 | 3 |
gastrointestinal system serosa | 1.19e-09 | 3 |
mesentery of stomach | 1.19e-09 | 3 |
gut mesentery | 1.19e-09 | 3 |
dorsal mesentery | 1.19e-09 | 3 |
dorsal mesogastrium | 1.19e-09 | 3 |
peritoneal cavity | 1.19e-09 | 3 |
spleen primordium | 1.19e-09 | 3 |
mouth mucosa | 1.04e-08 | 13 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.26e-25 | 1 |
keratoacanthoma | 1.26e-25 | 1 |
squamous cell carcinoma | 1.08e-16 | 14 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |
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