FFCP PHASE1:Hg19::chr6:138820685..138820701,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57224|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21021|TSSclassifier=S|UniProt=E2QRJ1|association_with_transcript=-54bp_to_ENST00000343505,ENST00000426841_5end|coexpression_cluster_id=C76|description=CAGE_peak_16_at_NHSL1_5end|id=chr6:138820685..138820701,-|ontology_enrichment_celltype=CL:0000181!3.47e-08!12;CL:0000417!3.47e-08!12;CL:0000668!3.47e-08!12;CL:0000414!3.47e-08!12;CL:0000412!3.47e-08!12;CL:0000182!3.47e-08!12;CL:0000128!8.10e-07!7;CL:0000126!8.10e-07!7;CL:0000127!8.10e-07!7;CL:0002453!8.10e-07!7;CL:0002605!8.90e-07!3|ontology_enrichment_celltype_v019=CL:0000182;4.04e-24;12!CL:0002535;2.15e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,3.49e-24,12;CL:0002535,2.15e-07,2|ontology_enrichment_development_v019=UBERON:0004161;4.87e-10;11!UBERON:0003104;3.02e-09;31!UBERON:0009497;1.41e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.31e-17!57;UBERON:0005068!1.31e-17!57;UBERON:0006241!1.31e-17!57;UBERON:0007135!1.31e-17!57;UBERON:0003075!1.23e-15!86;UBERON:0007284!1.23e-15!86;UBERON:0005743!3.33e-15!86;UBERON:0002346!1.54e-14!90;UBERON:0001017!5.97e-14!82;UBERON:0000073!6.08e-13!94;UBERON:0001016!6.08e-13!94;UBERON:0002616!1.39e-12!59;UBERON:0003056!2.54e-12!61;UBERON:0002780!3.41e-11!41;UBERON:0001890!3.41e-11!41;UBERON:0006240!3.41e-11!41;UBERON:0003080!8.08e-11!42;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0007023!2.08e-09!115;UBERON:0004121!3.22e-09!169;UBERON:0000924!9.02e-09!173;UBERON:0006601!9.02e-09!173;UBERON:0003076!1.25e-08!15;UBERON:0003057!1.25e-08!15;UBERON:0001893!4.05e-08!34;UBERON:0000033!4.25e-08!123;UBERON:0000153!5.58e-08!129;UBERON:0007811!5.58e-08!129;UBERON:0001869!1.68e-07!32;UBERON:0002791!2.46e-07!33|ontology_enrichment_uberon_v019=UBERON:0001905;4.94e-25;2!UBERON:0002757;4.94e-25;2!UBERON:0010134;4.94e-25;2!UBERON:0005408;4.94e-25;2!UBERON:0001899;4.94e-25;2!UBERON:0002107;3.03e-15;19!UBERON:0006925;3.03e-15;19!UBERON:0002368;8.68e-15;33!UBERON:0003296;5.07e-13;4!UBERON:0010133;5.07e-13;4!UBERON:0002784;5.07e-13;4!UBERON:0000949;1.07e-12;43!UBERON:0002423;1.41e-11;25!UBERON:0002365;1.23e-09;31!UBERON:0002330;1.23e-09;31!UBERON:0001894;8.07e-08;7!UBERON:0005172;1.31e-07;52!UBERON:0005173;1.31e-07;52!UBERON:0006955;2.15e-07;2!UBERON:0004801;2.15e-07;2!UBERON:0002417;2.39e-07;58!UBERON:0000916;2.39e-07;58!UBERON:0002530;4.63e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.95e-25,2;UBERON:0002757,4.95e-25,2;UBERON:0010134,4.95e-25,2;UBERON:0005408,4.95e-25,2;UBERON:0001899,4.95e-25,2;UBERON:0002368,7.51e-16,35;UBERON:0002107,2.77e-15,19;UBERON:0006925,2.77e-15,19;UBERON:0008836,2.77e-15,19;UBERON:0008835,3.39e-13,22;UBERON:0003894,3.39e-13,22;UBERON:0003296,5.08e-13,4;UBERON:0010133,5.08e-13,4;UBERON:0002784,5.08e-13,4;UBERON:0009854,1.27e-12,23;UBERON:0000949,3.37e-12,45;UBERON:0007499,1.32e-11,25;UBERON:0009497,1.32e-11,25;UBERON:0000015,1.32e-11,25;UBERON:0002423,1.32e-11,25;UBERON:0006235,1.32e-11,25;UBERON:0004161,1.32e-11,25;UBERON:0009856,3.70e-11,26;UBERON:0005172,6.07e-10,54;UBERON:0005173,6.07e-10,54;UBERON:0002365,2.40e-09,31;UBERON:0002330,2.40e-09,31;UBERON:0002530,3.72e-09,59;UBERON:0002417,6.92e-09,60;UBERON:0000916,6.92e-09,60;UBERON:0001894,8.08e-08,7;UBERON:0006222,8.08e-08,7;UBERON:0006955,2.15e-07,2;UBERON:0004801,2.15e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.136874425072884,1.00434111675842,3.132949635666,2.38091709404843,2.67616656466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.18157981336281,0,0.368965315629341,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,40.3092396566842,0,0.123084805461069,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=S | |||
|UniProt=E2QRJ1 | |||
|association_with_transcript=-54bp_to_ENST00000343505,ENST00000426841_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_16_at_NHSL1_5end | |||
|id=chr6:138820685..138820701,- | |||
|ontology_enrichment_celltype=CL:0000181!3.47e-08!12;CL:0000417!3.47e-08!12;CL:0000668!3.47e-08!12;CL:0000414!3.47e-08!12;CL:0000412!3.47e-08!12;CL:0000182!3.47e-08!12;CL:0000128!8.10e-07!7;CL:0000126!8.10e-07!7;CL:0000127!8.10e-07!7;CL:0002453!8.10e-07!7;CL:0002605!8.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.04e-24;12!CL:0002535;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.49e-24,12;CL:0002535,2.15e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.87e-10;11!UBERON:0003104;3.02e-09;31!UBERON:0009497;1.41e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-17!57;UBERON:0005068!1.31e-17!57;UBERON:0006241!1.31e-17!57;UBERON:0007135!1.31e-17!57;UBERON:0003075!1.23e-15!86;UBERON:0007284!1.23e-15!86;UBERON:0005743!3.33e-15!86;UBERON:0002346!1.54e-14!90;UBERON:0001017!5.97e-14!82;UBERON:0000073!6.08e-13!94;UBERON:0001016!6.08e-13!94;UBERON:0002616!1.39e-12!59;UBERON:0003056!2.54e-12!61;UBERON:0002780!3.41e-11!41;UBERON:0001890!3.41e-11!41;UBERON:0006240!3.41e-11!41;UBERON:0003080!8.08e-11!42;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0007023!2.08e-09!115;UBERON:0004121!3.22e-09!169;UBERON:0000924!9.02e-09!173;UBERON:0006601!9.02e-09!173;UBERON:0003076!1.25e-08!15;UBERON:0003057!1.25e-08!15;UBERON:0001893!4.05e-08!34;UBERON:0000033!4.25e-08!123;UBERON:0000153!5.58e-08!129;UBERON:0007811!5.58e-08!129;UBERON:0001869!1.68e-07!32;UBERON:0002791!2.46e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.94e-25;2!UBERON:0002757;4.94e-25;2!UBERON:0010134;4.94e-25;2!UBERON:0005408;4.94e-25;2!UBERON:0001899;4.94e-25;2!UBERON:0002107;3.03e-15;19!UBERON:0006925;3.03e-15;19!UBERON:0002368;8.68e-15;33!UBERON:0003296;5.07e-13;4!UBERON:0010133;5.07e-13;4!UBERON:0002784;5.07e-13;4!UBERON:0000949;1.07e-12;43!UBERON:0002423;1.41e-11;25!UBERON:0002365;1.23e-09;31!UBERON:0002330;1.23e-09;31!UBERON:0001894;8.07e-08;7!UBERON:0005172;1.31e-07;52!UBERON:0005173;1.31e-07;52!UBERON:0006955;2.15e-07;2!UBERON:0004801;2.15e-07;2!UBERON:0002417;2.39e-07;58!UBERON:0000916;2.39e-07;58!UBERON:0002530;4.63e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.95e-25,2;UBERON:0002757,4.95e-25,2;UBERON:0010134,4.95e-25,2;UBERON:0005408,4.95e-25,2;UBERON:0001899,4.95e-25,2;UBERON:0002368,7.51e-16,35;UBERON:0002107,2.77e-15,19;UBERON:0006925,2.77e-15,19;UBERON:0008836,2.77e-15,19;UBERON:0008835,3.39e-13,22;UBERON:0003894,3.39e-13,22;UBERON:0003296,5.08e-13,4;UBERON:0010133,5.08e-13,4;UBERON:0002784,5.08e-13,4;UBERON:0009854,1.27e-12,23;UBERON:0000949,3.37e-12,45;UBERON:0007499,1.32e-11,25;UBERON:0009497,1.32e-11,25;UBERON:0000015,1.32e-11,25;UBERON:0002423,1.32e-11,25;UBERON:0006235,1.32e-11,25;UBERON:0004161,1.32e-11,25;UBERON:0009856,3.70e-11,26;UBERON:0005172,6.07e-10,54;UBERON:0005173,6.07e-10,54;UBERON:0002365,2.40e-09,31;UBERON:0002330,2.40e-09,31;UBERON:0002530,3.72e-09,59;UBERON:0002417,6.92e-09,60;UBERON:0000916,6.92e-09,60;UBERON:0001894,8.08e-08,7;UBERON:0006222,8.08e-08,7;UBERON:0006955,2.15e-07,2;UBERON:0004801,2.15e-07,2 | |||
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|short_description=p16@NHSL1 | |||
}} |
Revision as of 18:21, 13 September 2013
Short description: | p16@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_NHSL1_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -54bp_to_ENST00000343505, ENST00000426841_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E2QRJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.49e-24 | 12 |
epithelial cell of cervix | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.95e-25 | 2 |
regional part of epithalamus | 4.95e-25 | 2 |
secretory circumventricular organ | 4.95e-25 | 2 |
circumventricular organ | 4.95e-25 | 2 |
epithalamus | 4.95e-25 | 2 |
endocrine gland | 7.51e-16 | 35 |
liver | 2.77e-15 | 19 |
digestive gland | 2.77e-15 | 19 |
liver bud | 2.77e-15 | 19 |
hepatic diverticulum | 3.39e-13 | 22 |
liver primordium | 3.39e-13 | 22 |
gland of diencephalon | 5.08e-13 | 4 |
neuroendocrine gland | 5.08e-13 | 4 |
regional part of diencephalon | 5.08e-13 | 4 |
digestive tract diverticulum | 1.27e-12 | 23 |
endocrine system | 3.37e-12 | 45 |
epithelial sac | 1.32e-11 | 25 |
epithelium of foregut-midgut junction | 1.32e-11 | 25 |
anatomical boundary | 1.32e-11 | 25 |
hepatobiliary system | 1.32e-11 | 25 |
foregut-midgut junction | 1.32e-11 | 25 |
septum transversum | 1.32e-11 | 25 |
sac | 3.70e-11 | 26 |
abdomen element | 6.07e-10 | 54 |
abdominal segment element | 6.07e-10 | 54 |
exocrine gland | 2.40e-09 | 31 |
exocrine system | 2.40e-09 | 31 |
gland | 3.72e-09 | 59 |
abdominal segment of trunk | 6.92e-09 | 60 |
abdomen | 6.92e-09 | 60 |
diencephalon | 8.08e-08 | 7 |
future diencephalon | 8.08e-08 | 7 |
uterine epithelium | 2.15e-07 | 2 |
cervix epithelium | 2.15e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.