FFCP PHASE1:Hg19::chr9:100700640..100700651,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55363|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=17509|TSSclassifier=N|UniProt=Q9BXL5|association_with_transcript=-114bp_to_NM_197978,uc004axy.2_5end|coexpression_cluster_id=C14|description=CAGE_peak_3_at_HEMGN_5end|id=chr9:100700640..100700651,-|ontology_enrichment_celltype=CL:0000764!3.50e-09!2;CL:0000765!3.50e-09!2;CL:0000050!3.50e-09!2;CL:0000038!3.50e-09!2;CL:0000558!3.50e-09!2;CL:0000547!3.50e-09!2;CL:0000549!3.50e-09!2;CL:0000550!3.50e-09!2;CL:0000552!3.50e-09!2|ontology_enrichment_celltype_v019=CL:0000764;8.35e-18;2!CL:0000558;8.35e-18;2|ontology_enrichment_celltype_v019_2=CL:0000764,8.35e-18,2;CL:0000765,8.35e-18,2;CL:0000050,8.35e-18,2;CL:0000038,8.35e-18,2;CL:0000558,8.35e-18,2;CL:0000547,8.35e-18,2;CL:0000549,8.35e-18,2;CL:0000550,8.35e-18,2;CL:0000552,8.35e-18,2|ontology_enrichment_development_v019=UBERON:0000358;3.25e-09;1!UBERON:0004140;4.68e-09;1|ontology_enrichment_disease=DOID:1036!1.27e-16!8;DOID:8692!6.10e-10!31;DOID:1240!4.12e-09!39;DOID:2531!8.44e-08!51;DOID:0060083!8.44e-08!51|ontology_enrichment_disease_v019=DOID:1036;3.43e-16;8|ontology_enrichment_disease_v019_2=DOID:1036,3.44e-16,8|ontology_enrichment_uberon=UBERON:0000178!4.94e-20!15;UBERON:0000179!4.94e-20!15;UBERON:0000463!4.94e-20!15;UBERON:0000341!3.76e-08!2;UBERON:0007023!5.55e-08!115;UBERON:0003127!7.45e-08!2|ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-43;15!UBERON:0000179;5.39e-43;15!UBERON:0000463;5.39e-43;15!UBERON:0002390;3.09e-22;32!UBERON:0002193;3.56e-11;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.40e-43,15;UBERON:0000179,5.40e-43,15;UBERON:0000463,5.40e-43,15;UBERON:0002390,4.49e-08,98;UBERON:0003061,4.49e-08,98;UBERON:0002193,3.64e-07,108;UBERON:0007023,6.86e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,1.54934401160603,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.2431438572588,41.3068012619343,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,40.5958087385735,46.6428696356849,18.2287099895732,20.7261644648276,16.865853196534,39.5568719827558,51.843017974859,11.1037524681198,0,0,0,0,0,0,0.478278818186467,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0.66614393599564,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96310453357798,4.50943828930801,5.03464760927528,4.17458211993207,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,1.32506888912221,0,0,0,0,0,9.43225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,1.22469987149797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.714193294391221,0.193766729508018,0.869046000142011,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.665320713092027,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p3@HEMGN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55363 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17509 | |||
|TSSclassifier=N | |||
|UniProt=Q9BXL5 | |||
|association_with_transcript=-114bp_to_NM_197978,uc004axy.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_HEMGN_5end | |||
|id=chr9:100700640..100700651,- | |||
|ontology_enrichment_celltype=CL:0000764!3.50e-09!2;CL:0000765!3.50e-09!2;CL:0000050!3.50e-09!2;CL:0000038!3.50e-09!2;CL:0000558!3.50e-09!2;CL:0000547!3.50e-09!2;CL:0000549!3.50e-09!2;CL:0000550!3.50e-09!2;CL:0000552!3.50e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;8.35e-18;2!CL:0000558;8.35e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.35e-18,2;CL:0000765,8.35e-18,2;CL:0000050,8.35e-18,2;CL:0000038,8.35e-18,2;CL:0000558,8.35e-18,2;CL:0000547,8.35e-18,2;CL:0000549,8.35e-18,2;CL:0000550,8.35e-18,2;CL:0000552,8.35e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.25e-09;1!UBERON:0004140;4.68e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!1.27e-16!8;DOID:8692!6.10e-10!31;DOID:1240!4.12e-09!39;DOID:2531!8.44e-08!51;DOID:0060083!8.44e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.43e-16;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.44e-16,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.94e-20!15;UBERON:0000179!4.94e-20!15;UBERON:0000463!4.94e-20!15;UBERON:0000341!3.76e-08!2;UBERON:0007023!5.55e-08!115;UBERON:0003127!7.45e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-43;15!UBERON:0000179;5.39e-43;15!UBERON:0000463;5.39e-43;15!UBERON:0002390;3.09e-22;32!UBERON:0002193;3.56e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.40e-43,15;UBERON:0000179,5.40e-43,15;UBERON:0000463,5.40e-43,15;UBERON:0002390,4.49e-08,98;UBERON:0003061,4.49e-08,98;UBERON:0002193,3.64e-07,108;UBERON:0007023,6.86e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,1.54934401160603,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.2431438572588,41.3068012619343,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,40.5958087385735,46.6428696356849,18.2287099895732,20.7261644648276,16.865853196534,39.5568719827558,51.843017974859,11.1037524681198,0,0,0,0,0,0,0.478278818186467,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0.66614393599564,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96310453357798,4.50943828930801,5.03464760927528,4.17458211993207,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2764859772478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,1.32506888912221,0,0,0,0,0,9.43225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,1.22469987149797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.714193294391221,0.193766729508018,0.869046000142011,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0.665320713092027,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p3@HEMGN | |||
}} |
Revision as of 06:36, 14 September 2013
Short description: | p3@HEMGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HEMGN_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -114bp_to_NM_197978, uc004axy.2_5end |
EntrezGene: | HEMGN |
HGNC: | 17509 |
UniProt: | Q9BXL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.35e-18 | 2 |
erythroblast | 8.35e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 8.35e-18 | 2 |
erythroid progenitor cell | 8.35e-18 | 2 |
reticulocyte | 8.35e-18 | 2 |
proerythroblast | 8.35e-18 | 2 |
basophilic erythroblast | 8.35e-18 | 2 |
polychromatophilic erythroblast | 8.35e-18 | 2 |
orthochromatic erythroblast | 8.35e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.40e-43 | 15 |
haemolymphatic fluid | 5.40e-43 | 15 |
organism substance | 5.40e-43 | 15 |
hematopoietic system | 4.49e-08 | 98 |
blood island | 4.49e-08 | 98 |
hemolymphoid system | 3.64e-07 | 108 |
adult organism | 6.86e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.44e-16 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.