FFCP PHASE1:Hg19::chr9:104187850..104187863,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=417|TSSclassifier=S|UniProt=P05062|association_with_transcript=-28bp_to_X00270_5end|coexpression_cluster_id=C211|description=CAGE_peak_2_at_ALDOB_5end|id=chr9:104187850..104187863,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.77e-11;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.72e-11,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.18e-13!27;UBERON:0009497!2.68e-11!25;UBERON:0000015!2.68e-11!25;UBERON:0002423!2.68e-11!25;UBERON:0006235!2.68e-11!25;UBERON:0004161!2.68e-11!25;UBERON:0002107!1.03e-10!19;UBERON:0006925!1.03e-10!19;UBERON:0008836!1.03e-10!19;UBERON:0005409!3.06e-10!35;UBERON:0008835!3.18e-09!22;UBERON:0003894!3.18e-09!22;UBERON:0002108!5.25e-09!14;UBERON:0009854!8.17e-09!23;UBERON:0003929!1.86e-08!54;UBERON:0005172!2.28e-08!55;UBERON:0005173!2.28e-08!55;UBERON:0007499!4.31e-08!25;UBERON:0000949!4.82e-08!45;UBERON:0002368!6.74e-08!35;UBERON:0005057!9.01e-08!26;UBERON:0009856!9.01e-08!26;UBERON:0001007!1.28e-07!155;UBERON:0001555!1.28e-07!155;UBERON:0007026!1.28e-07!155;UBERON:0002417!1.94e-07!61;UBERON:0000916!1.94e-07!61;UBERON:0004921!6.37e-07!129;UBERON:0004185!6.37e-07!129;UBERON:0004119!8.72e-07!169;UBERON:0000925!8.72e-07!169;UBERON:0006595!8.72e-07!169|ontology_enrichment_uberon_v019=UBERON:0002108;1.18e-26;4!UBERON:0002107;9.82e-19;19!UBERON:0006925;9.82e-19;19!UBERON:0002423;2.98e-14;25!UBERON:0000160;4.29e-13;17!UBERON:0002365;1.77e-11;31!UBERON:0002330;1.77e-11;31!UBERON:0005409;2.63e-10;22!UBERON:0002368;5.61e-10;33!UBERON:0001007;1.59e-08;81!UBERON:0005172;1.34e-07;52!UBERON:0005173;1.34e-07;52!UBERON:0000949;2.50e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.18e-26,4;UBERON:0002107,9.46e-19,19;UBERON:0006925,9.46e-19,19;UBERON:0008836,9.46e-19,19;UBERON:0008835,3.34e-16,22;UBERON:0003894,3.34e-16,22;UBERON:0009854,1.68e-15,23;UBERON:0007499,2.90e-14,25;UBERON:0009497,2.90e-14,25;UBERON:0000015,2.90e-14,25;UBERON:0002423,2.90e-14,25;UBERON:0006235,2.90e-14,25;UBERON:0004161,2.90e-14,25;UBERON:0009856,1.02e-13,26;UBERON:0000160,4.36e-13,17;UBERON:0002365,1.66e-11,31;UBERON:0002330,1.66e-11,31;UBERON:0002368,3.45e-10,35;UBERON:0005172,3.41e-09,54;UBERON:0005173,3.41e-09,54;UBERON:0005409,3.85e-09,25;UBERON:0004921,7.60e-09,118;UBERON:0002417,3.04e-08,60;UBERON:0000916,3.04e-08,60;UBERON:0000949,6.51e-08,45;UBERON:0001007,4.98e-07,145;UBERON:0001555,4.98e-07,145;UBERON:0007026,4.98e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4914097501126,7.86261773342101,5.90789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.14023992017006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22609247612436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34197785377715,0.611030144933625,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79313402068495,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,13.1967810364585,16.6105265983008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.096476228347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@ALDOB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=417 | |||
|TSSclassifier=S | |||
|UniProt=P05062 | |||
|association_with_transcript=-28bp_to_X00270_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_2_at_ALDOB_5end | |||
|id=chr9:104187850..104187863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.77e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.72e-11,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.18e-13!27;UBERON:0009497!2.68e-11!25;UBERON:0000015!2.68e-11!25;UBERON:0002423!2.68e-11!25;UBERON:0006235!2.68e-11!25;UBERON:0004161!2.68e-11!25;UBERON:0002107!1.03e-10!19;UBERON:0006925!1.03e-10!19;UBERON:0008836!1.03e-10!19;UBERON:0005409!3.06e-10!35;UBERON:0008835!3.18e-09!22;UBERON:0003894!3.18e-09!22;UBERON:0002108!5.25e-09!14;UBERON:0009854!8.17e-09!23;UBERON:0003929!1.86e-08!54;UBERON:0005172!2.28e-08!55;UBERON:0005173!2.28e-08!55;UBERON:0007499!4.31e-08!25;UBERON:0000949!4.82e-08!45;UBERON:0002368!6.74e-08!35;UBERON:0005057!9.01e-08!26;UBERON:0009856!9.01e-08!26;UBERON:0001007!1.28e-07!155;UBERON:0001555!1.28e-07!155;UBERON:0007026!1.28e-07!155;UBERON:0002417!1.94e-07!61;UBERON:0000916!1.94e-07!61;UBERON:0004921!6.37e-07!129;UBERON:0004185!6.37e-07!129;UBERON:0004119!8.72e-07!169;UBERON:0000925!8.72e-07!169;UBERON:0006595!8.72e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.18e-26;4!UBERON:0002107;9.82e-19;19!UBERON:0006925;9.82e-19;19!UBERON:0002423;2.98e-14;25!UBERON:0000160;4.29e-13;17!UBERON:0002365;1.77e-11;31!UBERON:0002330;1.77e-11;31!UBERON:0005409;2.63e-10;22!UBERON:0002368;5.61e-10;33!UBERON:0001007;1.59e-08;81!UBERON:0005172;1.34e-07;52!UBERON:0005173;1.34e-07;52!UBERON:0000949;2.50e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.18e-26,4;UBERON:0002107,9.46e-19,19;UBERON:0006925,9.46e-19,19;UBERON:0008836,9.46e-19,19;UBERON:0008835,3.34e-16,22;UBERON:0003894,3.34e-16,22;UBERON:0009854,1.68e-15,23;UBERON:0007499,2.90e-14,25;UBERON:0009497,2.90e-14,25;UBERON:0000015,2.90e-14,25;UBERON:0002423,2.90e-14,25;UBERON:0006235,2.90e-14,25;UBERON:0004161,2.90e-14,25;UBERON:0009856,1.02e-13,26;UBERON:0000160,4.36e-13,17;UBERON:0002365,1.66e-11,31;UBERON:0002330,1.66e-11,31;UBERON:0002368,3.45e-10,35;UBERON:0005172,3.41e-09,54;UBERON:0005173,3.41e-09,54;UBERON:0005409,3.85e-09,25;UBERON:0004921,7.60e-09,118;UBERON:0002417,3.04e-08,60;UBERON:0000916,3.04e-08,60;UBERON:0000949,6.51e-08,45;UBERON:0001007,4.98e-07,145;UBERON:0001555,4.98e-07,145;UBERON:0007026,4.98e-07,145 | |||
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|short_description=p2@ALDOB | |||
}} |
Revision as of 06:43, 14 September 2013
Short description: | p2@ALDOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ALDOB_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -28bp_to_X00270_5end |
EntrezGene: | ALDOB |
HGNC: | 417 |
UniProt: | P05062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.72e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.18e-26 | 4 |
liver | 9.46e-19 | 19 |
digestive gland | 9.46e-19 | 19 |
liver bud | 9.46e-19 | 19 |
hepatic diverticulum | 3.34e-16 | 22 |
liver primordium | 3.34e-16 | 22 |
digestive tract diverticulum | 1.68e-15 | 23 |
epithelial sac | 2.90e-14 | 25 |
epithelium of foregut-midgut junction | 2.90e-14 | 25 |
anatomical boundary | 2.90e-14 | 25 |
hepatobiliary system | 2.90e-14 | 25 |
foregut-midgut junction | 2.90e-14 | 25 |
septum transversum | 2.90e-14 | 25 |
sac | 1.02e-13 | 26 |
intestine | 4.36e-13 | 17 |
exocrine gland | 1.66e-11 | 31 |
exocrine system | 1.66e-11 | 31 |
endocrine gland | 3.45e-10 | 35 |
abdomen element | 3.41e-09 | 54 |
abdominal segment element | 3.41e-09 | 54 |
gastrointestinal system | 3.85e-09 | 25 |
subdivision of digestive tract | 7.60e-09 | 118 |
abdominal segment of trunk | 3.04e-08 | 60 |
abdomen | 3.04e-08 | 60 |
endocrine system | 6.51e-08 | 45 |
digestive system | 4.98e-07 | 145 |
digestive tract | 4.98e-07 | 145 |
primitive gut | 4.98e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.