FFCP PHASE1:Hg19::chrX:107825670..107825687,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1287|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2207|TSSclassifier=S|UniProt=Q49AM6|association_with_transcript=-34bp_to_ENST00000483338,uc004eob.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_5_at_COL4A5_5end|id=chrX:107825670..107825687,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.68e-25;82!UBERON:0006241;1.40e-13;3!UBERON:0003057;1.40e-13;3!UBERON:0010122;3.53e-09;2!UBERON:0002532;1.78e-07;206!UBERON:0010316;1.78e-07;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.73e-115!57;UBERON:0005068!2.73e-115!57;UBERON:0006241!2.73e-115!57;UBERON:0007135!2.73e-115!57;UBERON:0002616!4.02e-95!59;UBERON:0001017!1.44e-92!82;UBERON:0005743!6.53e-88!86;UBERON:0000955!1.11e-87!69;UBERON:0006238!1.11e-87!69;UBERON:0000073!8.32e-83!94;UBERON:0001016!8.32e-83!94;UBERON:0002780!7.84e-82!41;UBERON:0001890!7.84e-82!41;UBERON:0006240!7.84e-82!41;UBERON:0003075!5.38e-81!86;UBERON:0007284!5.38e-81!86;UBERON:0002020!6.05e-80!34;UBERON:0003528!6.05e-80!34;UBERON:0001893!8.77e-80!34;UBERON:0003080!9.51e-80!42;UBERON:0002346!5.23e-77!90;UBERON:0002791!2.39e-76!33;UBERON:0001869!3.34e-72!32;UBERON:0007023!1.87e-68!115;UBERON:0002619!1.78e-55!22;UBERON:0003056!6.28e-53!61;UBERON:0000033!8.76e-51!123;UBERON:0001950!9.35e-49!20;UBERON:0000956!1.61e-48!25;UBERON:0000203!1.61e-48!25;UBERON:0000153!5.17e-48!129;UBERON:0007811!5.17e-48!129;UBERON:0004121!2.24e-44!169;UBERON:0000924!3.87e-43!173;UBERON:0006601!3.87e-43!173;UBERON:0003076!7.20e-35!15;UBERON:0003057!7.20e-35!15;UBERON:0002308!2.85e-34!9;UBERON:0000125!2.85e-34!9;UBERON:0002420!1.45e-33!9;UBERON:0007245!1.45e-33!9;UBERON:0010009!1.45e-33!9;UBERON:0010011!1.45e-33!9;UBERON:0000454!1.45e-33!9;UBERON:0004732!2.68e-28!13;UBERON:0000025!1.55e-27!194;UBERON:0009663!1.01e-26!7;UBERON:0004733!1.11e-24!12;UBERON:0002028!1.11e-24!12;UBERON:0007277!1.11e-24!12;UBERON:0002298!3.02e-24!8;UBERON:0000200!1.28e-22!6;UBERON:0004111!2.62e-20!241;UBERON:0000349!8.96e-19!5;UBERON:0000477!1.05e-16!286;UBERON:0001871!1.22e-16!7;UBERON:0000483!1.24e-16!309;UBERON:0000064!1.64e-16!219;UBERON:0000119!2.24e-16!312;UBERON:0000369!3.42e-15!4;UBERON:0002435!3.42e-15!4;UBERON:0000204!3.42e-15!4;UBERON:0010082!3.42e-15!4;UBERON:0002680!1.14e-14!9;UBERON:0001895!1.14e-14!9;UBERON:0010092!1.14e-14!9;UBERON:0000475!2.22e-14!365;UBERON:0006331!3.45e-13!3;UBERON:0001896!6.53e-13!3;UBERON:0005290!6.53e-13!3;UBERON:0010096!6.53e-13!3;UBERON:0002021!8.27e-13!5;UBERON:0000988!8.28e-13!3;UBERON:0002240!1.74e-12!3;UBERON:0001872!1.82e-12!5;UBERON:0002771!4.24e-12!3;UBERON:0005383!8.40e-12!3;UBERON:0005382!8.40e-12!3;UBERON:0005162!1.41e-09!2;UBERON:0000122!1.41e-09!2;UBERON:0001897!1.47e-09!2;UBERON:0001875!2.11e-09!2;UBERON:0006514!2.11e-09!2;UBERON:0002148!2.81e-09!2;UBERON:0009662!2.81e-09!2;UBERON:0001870!6.73e-09!2;UBERON:0000062!1.24e-08!511;UBERON:0001876!1.46e-08!2;UBERON:0001954!1.58e-08!2;UBERON:0003022!1.58e-08!2;UBERON:0002421!1.58e-08!2;UBERON:0002600!1.58e-08!2;UBERON:0001873!1.77e-08!2;UBERON:0010122!1.77e-08!2;UBERON:0002360!5.46e-08!2;UBERON:0000094!5.46e-08!2;UBERON:0007645!5.46e-08!2;UBERON:0005174!1.18e-07!5;UBERON:0001137!1.18e-07!5|ontology_enrichment_uberon_v019=UBERON:0001893;6.32e-75;34!UBERON:0003528;4.56e-73;34!UBERON:0002020;4.56e-73;34!UBERON:0002791;5.60e-71;32!UBERON:0001869;1.32e-70;32!UBERON:0002780;1.58e-63;41!UBERON:0001890;1.58e-63;41!UBERON:0000073;7.73e-62;53!UBERON:0002616;7.73e-62;53!UBERON:0002619;9.31e-61;22!UBERON:0001950;2.14e-53;20!UBERON:0000956;3.25e-53;25!UBERON:0000203;3.25e-53;25!UBERON:0001017;4.46e-41;75!UBERON:0000955;1.42e-40;68!UBERON:0000125;1.64e-37;9!UBERON:0002308;1.64e-37;9!UBERON:0002420;8.41e-37;9!UBERON:0007245;8.41e-37;9!UBERON:0010009;8.41e-37;9!UBERON:0010011;8.41e-37;9!UBERON:0000454;8.41e-37;9!UBERON:0001016;6.64e-33;83!UBERON:0009663;2.96e-29;7!UBERON:0002298;3.93e-26;6!UBERON:0004732;2.18e-25;13!UBERON:0000200;1.28e-24;6!UBERON:0004733;1.24e-21;12!UBERON:0002028;1.24e-21;12!UBERON:0000349;1.68e-20;5!UBERON:0007023;3.99e-20;114!UBERON:0000369;1.39e-16;4!UBERON:0002435;1.39e-16;4!UBERON:0000204;1.39e-16;4!UBERON:0001871;1.14e-14;6!UBERON:0001896;5.20e-14;3!UBERON:0005290;5.20e-14;3!UBERON:0000988;6.90e-14;3!UBERON:0002021;7.76e-14;5!UBERON:0001872;1.26e-13;5!UBERON:0002240;1.40e-13;3!UBERON:0005174;1.40e-13;3!UBERON:0001137;1.40e-13;3!UBERON:0001870;2.71e-13;3!UBERON:0011216;5.95e-13;132!UBERON:0005383;8.22e-13;3!UBERON:0005382;8.22e-13;3!UBERON:0002680;1.78e-11;9!UBERON:0001895;1.78e-11;9!UBERON:0005162;2.44e-10;2!UBERON:0000122;2.44e-10;2!UBERON:0001897;2.50e-10;2!UBERON:0010225;2.50e-10;2!UBERON:0001875;3.57e-10;2!UBERON:0006514;3.57e-10;2!UBERON:0010314;3.76e-10;132!UBERON:0002148;5.44e-10;2!UBERON:0006331;5.44e-10;2!UBERON:0009662;5.44e-10;2!UBERON:0002702;1.65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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2207 | |||
|TSSclassifier=S | |||
|UniProt=Q49AM6 | |||
|association_with_transcript=-34bp_to_ENST00000483338,uc004eob.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_COL4A5_5end | |||
|id=chrX:107825670..107825687,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.68e-25;82!UBERON:0006241;1.40e-13;3!UBERON:0003057;1.40e-13;3!UBERON:0010122;3.53e-09;2!UBERON:0002532;1.78e-07;206!UBERON:0010316;1.78e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@COL4A5 | |||
}} |
Revision as of 10:22, 14 September 2013
Short description: | p5@COL4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_COL4A5_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -34bp_to_ENST00000483338, uc004eob.1_5end |
EntrezGene: | COL4A5 |
HGNC: | 2207 |
UniProt: | Q49AM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.