FFCP PHASE1:Hg19::chr11:45202609..45202623,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56981 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_8_at_PRDM11_5end | |||
|id=chr11:45202609..45202623,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.22e-15!254;CL:0002076!1.40e-09!43;CL:0000223!1.56e-08!59;CL:0002251!4.69e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.18e-11;17!CL:0002518;2.18e-11;17!CL:1000449;1.98e-10;15!CL:0002681;3.97e-10;12!CL:0002584;3.97e-10;12!CL:1000507;1.85e-09;10!CL:1000494;1.85e-09;10!CL:0002368;2.89e-09;13!CL:0000239;5.52e-09;3!CL:1000615;5.52e-09;3!CL:0002166;5.52e-09;3!CL:0002306;5.52e-09;3!CL:0002076;3.02e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.29e-14,253;CL:1000497,1.02e-11,17;CL:0002518,1.02e-11,17;CL:1000449,1.35e-10,15;CL:0002681,2.61e-10,12;CL:0002584,2.61e-10,12;CL:1000507,1.01e-09,10;CL:1000494,1.01e-09,10;CL:0002166,1.66e-09,3;CL:0000239,1.97e-09,3;CL:1000615,1.97e-09,3;CL:0002306,1.97e-09,3;CL:0002076,3.08e-09,42;CL:0002368,3.29e-09,13;CL:0000223,3.78e-09,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.49e-08!106;DOID:1749!3.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.16e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.78e-13!347;UBERON:0004119!1.28e-11!169;UBERON:0000925!1.28e-11!169;UBERON:0006595!1.28e-11!169;UBERON:0000468!6.38e-09!659;UBERON:0000064!1.23e-08!219;UBERON:0000475!2.02e-08!365;UBERON:0000062!3.37e-08!511;UBERON:0001007!4.09e-08!155;UBERON:0001555!4.09e-08!155;UBERON:0007026!4.09e-08!155;UBERON:0003104!1.45e-07!238;UBERON:0009142!1.45e-07!238;UBERON:0001004!2.45e-07!72;UBERON:0000467!3.36e-07!625;UBERON:0000480!4.45e-07!626;UBERON:0000923!8.85e-07!604;UBERON:0005291!8.85e-07!604;UBERON:0006598!8.85e-07!604;UBERON:0002532!8.85e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.98e-10;15!UBERON:0004819;1.98e-10;15!UBERON:0001285;1.98e-10;15!UBERON:0007684;1.98e-10;15!UBERON:0001225;3.97e-10;12!UBERON:0008987;3.97e-10;12!UBERON:0004211;1.85e-09;10!UBERON:0009773;1.85e-09;10!UBERON:0001231;1.85e-09;10!UBERON:0004810;1.85e-09;10!UBERON:0006853;5.52e-09;3!UBERON:0007685;5.52e-09;3!UBERON:0004134;5.52e-09;3!UBERON:0006554;9.10e-09;30!UBERON:0001008;9.10e-09;30!UBERON:0001851;6.89e-08;15!UBERON:0000353;6.89e-08;15!UBERON:0002113;1.47e-07;24!UBERON:0011143;1.47e-07;24!UBERON:0001708;8.01e-07;4!UBERON:0003891;8.01e-07;4!UBERON:0000964;8.01e-07;4!UBERON:0010409;8.01e-07;4!UBERON:0008895;8.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.35e-10,15;UBERON:0009773,1.35e-10,15;UBERON:0001231,1.35e-10,15;UBERON:0001285,1.35e-10,15;UBERON:0007684,1.35e-10,15;UBERON:0004208,1.35e-10,15;UBERON:0001225,2.61e-10,12;UBERON:0008987,2.61e-10,12;UBERON:0006555,7.68e-10,16;UBERON:0004819,7.68e-10,16;UBERON:0004810,1.01e-09,10;UBERON:0006853,1.97e-09,3;UBERON:0007685,1.97e-09,3;UBERON:0004134,1.97e-09,3;UBERON:0001851,4.98e-08,15;UBERON:0000353,4.98e-08,15;UBERON:0000033,2.28e-07,56;UBERON:0001708,3.31e-07,4;UBERON:0008895,3.31e-07,4;UBERON:0006554,3.62e-07,47;UBERON:0002113,4.75e-07,26;UBERON:0003918,4.75e-07,26;UBERON:0011143,4.75e-07,26;UBERON:0005095,4.75e-07,26;UBERON:0007687,4.75e-07,26;UBERON:0001008,5.85e-07,48;UBERON:0003891,6.92e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,1.74467704820074,0,0,0,0.491467873003018,0.697801167972428,0.873765488520689,0,0.495065411840187,0,0,0,0,0,0.369363174230364,0.612002073732759,0.626909442956176,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0.919421224478927,1.50602959389125,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.351339142772504,0.196468613246569,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.17859945656816,0.673588117878509,0.563057402416611,0,0,0,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.756787138224657,0,1.64025002283658,0,0,0,0.469737994575059,0.971237666208789,0.140450806702248,0.204154171254893,0.737005903870608,0.206651562351531,0,0,0.910161361938026,0,1.68336113954066,0.875829639103749,0,0,0,0.300476117813194,0.113432183160021,0.358779271377724,0.213557388818567,0,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.505754070234305,0.482022059766964,0.661763836394364,0.217879444092406,0.474541238222193,0.539325232640658,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0.768251997860379,2.24803506515239,0.201057944823262,1.574003567695,2.93227474779292,0,0,0.463721619900307,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,2.68771405118175,1.55952606966625,0,0,0.383382679165211,0.985326475791887,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0.224262168690721,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,7.05408087008876,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.736148950314839,0,0.813795071099207,0,0,0.473107245101804,0.234282829985426,1.20378439891088,0,0,0,0.184369168541703,0.173767228936166,0.979005787313703,0.686286847621712,0,0,0,1.5156378572313,0,2.11673205330776,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.460404944679482,0,0,0,0.451199612907412,0.770153371044148,2.35304930753057,0,0.211103257785751,1.13733384070897,0,1.51141141271498,0,1.35473218771926,1.50506932156456,1.52925763827023,2.49322802678617,1.79099803777743,0.219259876645935,1.0457418040996,0.512900250232778,1.31205858279882,0.976135183992909,0.412164046590889,0.27470839445503,0.82509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,1.15699440752685,1.72971060628596,2.04180339991335,1.2138933702666,0,0,0,0,1.06461206063404,0,0.37064843820784,0,0,0.632758849437452,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0,0,0.808729926293264,1.58510321173008,0,0,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.687743287091848,0.35667105148125,0,0,0,0.75894634753143,1.39973888097993,1.05844323998063,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,3.10401107475673,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0.211673582723883,0.973865820823666,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.439524537815682,0,0,0,1.19372242368845,0.890894042497916,1.53580351049616,0,0,0.111308705022906,0,0,2.19172787076177,0,0,1.84083628503879,0,0.622079175323615,0.179736702294654,0.179021174675609,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,1.593108275997,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.10893846351899,3.34616986268648,0.538651809526579,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,2.73930466504926,1.21390189767046,0,2.41981432097328,0,0,0.300646838828985,0,0,0,0.627865836814451,0,0,0,0,0.685946781900644,1.04471047896483,0.52418000472609,0,0.870806981601766,0.803982487948041,1.06750094169172,0.678923115418936,0.0882561266915003,0,0,0.397429223405979,0.1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| |||
|short_description=p8@PRDM11 | |||
}} |
Revision as of 07:27, 11 January 2014
Short description: | p8@PRDM11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRDM11_5end |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | PRDM11 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.29e-14 | 253 |
kidney cell | 1.02e-11 | 17 |
kidney epithelial cell | 1.02e-11 | 17 |
epithelial cell of nephron | 1.35e-10 | 15 |
kidney cortical cell | 2.61e-10 | 12 |
renal cortical epithelial cell | 2.61e-10 | 12 |
kidney tubule cell | 1.01e-09 | 10 |
nephron tubule epithelial cell | 1.01e-09 | 10 |
epithelial cell of Malassez | 1.66e-09 | 3 |
brush border epithelial cell | 1.97e-09 | 3 |
kidney cortex tubule cell | 1.97e-09 | 3 |
epithelial cell of proximal tubule | 1.97e-09 | 3 |
endo-epithelial cell | 3.08e-09 | 42 |
respiratory epithelial cell | 3.29e-09 | 13 |
endodermal cell | 3.78e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.35e-10 | 15 |
renal tubule | 1.35e-10 | 15 |
nephron tubule | 1.35e-10 | 15 |
nephron | 1.35e-10 | 15 |
uriniferous tubule | 1.35e-10 | 15 |
nephrogenic mesenchyme | 1.35e-10 | 15 |
cortex of kidney | 2.61e-10 | 12 |
renal parenchyma | 2.61e-10 | 12 |
excretory tube | 7.68e-10 | 16 |
kidney epithelium | 7.68e-10 | 16 |
nephron tubule epithelium | 1.01e-09 | 10 |
renal cortex tubule | 1.97e-09 | 3 |
region of nephron tubule | 1.97e-09 | 3 |
proximal tubule | 1.97e-09 | 3 |
cortex | 4.98e-08 | 15 |
parenchyma | 4.98e-08 | 15 |
head | 2.28e-07 | 56 |
jaw skeleton | 3.31e-07 | 4 |
splanchnocranium | 3.31e-07 | 4 |
urinary system structure | 3.62e-07 | 47 |
kidney | 4.75e-07 | 26 |
kidney mesenchyme | 4.75e-07 | 26 |
upper urinary tract | 4.75e-07 | 26 |
kidney rudiment | 4.75e-07 | 26 |
kidney field | 4.75e-07 | 26 |
renal system | 5.85e-07 | 48 |
stroma | 6.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.16e-08 | 14 |