FFCP PHASE1:Hg19::chr11:63993779..63993796,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28189 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000537707_5end | |||
|description=CAGE_peak_2_at_NUDT22_5end | |||
|id=chr11:63993779..63993796,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.95e-12!180;CL:0000183!7.06e-12!59;CL:0000192!2.38e-11!42;CL:0000514!2.38e-11!42;CL:0000359!3.95e-11!32;CL:0000393!8.37e-11!60;CL:0000211!8.37e-11!60;CL:0000680!4.45e-10!57;CL:0000056!4.45e-10!57;CL:0000355!4.45e-10!57;CL:0000187!5.33e-10!54;CL:0000220!1.50e-08!246;CL:0002371!2.14e-08!591;CL:0002321!2.27e-08!248;CL:0000222!6.11e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.17e-10;32!CL:0000192;5.08e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.83e-11,32;CL:0000192,1.22e-10,43;CL:0000514,1.22e-10,43;CL:0000393,2.96e-10,61;CL:0000211,2.96e-10,61;CL:0000680,1.54e-09,58;CL:0000056,1.54e-09,58;CL:0000355,1.54e-09,58;CL:0000187,1.91e-09,55;CL:0002321,4.32e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.08e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.94e-11!70;UBERON:0000486!8.48e-11!82;UBERON:0001637!1.06e-10!42;UBERON:0003509!1.06e-10!42;UBERON:0004572!1.06e-10!42;UBERON:0000914!4.40e-10!83;UBERON:0002329!4.40e-10!83;UBERON:0003077!4.40e-10!83;UBERON:0003059!4.40e-10!83;UBERON:0007282!4.40e-10!83;UBERON:0009618!4.40e-10!83;UBERON:0007285!4.40e-10!83;UBERON:0002385!5.78e-10!63;UBERON:0001015!5.78e-10!63;UBERON:0000383!5.78e-10!63;UBERON:0001134!9.87e-10!61;UBERON:0002036!9.87e-10!61;UBERON:0003082!9.87e-10!61;UBERON:0005256!1.26e-09!143;UBERON:0000490!2.38e-09!138;UBERON:0004573!1.92e-08!33;UBERON:0004571!1.92e-08!33;UBERON:0002100!2.75e-08!216;UBERON:0004872!3.12e-08!84;UBERON:0001981!7.31e-08!60;UBERON:0007500!7.31e-08!60;UBERON:0004537!7.31e-08!60;UBERON:0006965!7.31e-08!60;UBERON:0003914!1.38e-07!118;UBERON:0002049!1.48e-07!79;UBERON:0007798!1.48e-07!79;UBERON:0001009!4.53e-07!113;UBERON:0000055!5.74e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.80e-07;42!UBERON:0003509;2.80e-07;42!UBERON:0004572;2.80e-07;42!UBERON:0004573;3.24e-07;33!UBERON:0004571;3.24e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.41e-12,78;UBERON:0002329,6.42e-11,71;UBERON:0003059,6.42e-11,71;UBERON:0007282,6.42e-11,71;UBERON:0004290,6.42e-11,71;UBERON:0009618,6.42e-11,71;UBERON:0003077,1.01e-10,72;UBERON:0007285,1.01e-10,72;UBERON:0001637,1.03e-10,42;UBERON:0003509,1.03e-10,42;UBERON:0004572,1.03e-10,42;UBERON:0007524,1.55e-10,73;UBERON:0000490,1.59e-10,148;UBERON:0000486,2.42e-10,83;UBERON:0003104,3.31e-10,160;UBERON:0009142,3.31e-10,160;UBERON:0002385,1.84e-09,64;UBERON:0001015,1.84e-09,64;UBERON:0000383,1.84e-09,64;UBERON:0005256,2.57e-09,122;UBERON:0001134,3.16e-09,62;UBERON:0002036,3.16e-09,62;UBERON:0003082,3.16e-09,62;UBERON:0002100,1.42e-08,199;UBERON:0004573,1.88e-08,33;UBERON:0004571,1.88e-08,33;UBERON:0004872,6.01e-08,83;UBERON:0003914,7.59e-08,117;UBERON:0007500,1.49e-07,59;UBERON:0001981,1.49e-07,59;UBERON:0004537,1.49e-07,59;UBERON:0006965,1.49e-07,59;UBERON:0002049,2.82e-07,78;UBERON:0007798,2.82e-07,78;UBERON:0001009,7.93e-07,112 | |||
|phase1_expression=3.63356758541113,3.63970890614671,2.53717927372748,2.00146596706261,2.23480547213644,4.36169262050184,0,5.05375898741465,6.00726944859629,4.42321085702716,13.9560233594486,1.74753097704138,1.84636884759917,2.10402800032079,6.2965501388304,7.39557661096953,1.80808358407193,2.92124036154949,3.41552959153355,3.20114750999649,5.30401797235058,5.64218498660558,4.29353980696585,2.6006140763848,2.88748071068046,1.37544130346312,1.88831355734875,1.02324015707783,1.57345710739562,0.767658796194425,1.23852898652861,9.19421224478927,9.33738348212575,5.17655614233503,2.24654881682875,1.42169232487422,2.64240395401362,2.76997704265939,1.20326668482085,2.60413044859022,1.56740831967947,1.94336199611388,3.09090681161024,1.16318591023652,0.755751887377619,0.242584061187816,0.232429036905685,1.23350366406548,1.23882548358041,1.1507695692886,1.0246428261164,0.47296445977717,0.344745680736619,1.93645405075148,0,1.88242339542605,0,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,2.63881040149373,2.39356389145958,0.852449501065388,0.290209238628584,0.56738522469114,0,0.502497330513487,2.08593167368081,0.434377689410233,1.81619850790011,0.368277635987565,0.316462387440884,3.59133986730301,4.03948169933583,2.30624510059213,2.80821577866238,3.90459921387916,0.964353520182481,4.84521664360123,4.57508357557907,3.65328307529268,1.75996244461323,4.36910889009705,2.66852776159066,4.69403244823158,4.40435585739614,4.02326707968138,7.27149360063348,2.86216126360609,0.569212969109448,2.34894875748376,2.29363936875137,1.32171328579026,0.560508562981536,4.74091352595139,1.7703879310245,0.786021525498329,1.02800749499755,2.67498392625085,2.93330039970231,2.36723902867367,1.94826728407911,3.23090324967003,3.53527088969805,2.87994062958707,1.35401931882508,2.94610035369053,2.86130564631732,4.43982342429925,3.59255023121603,2.31842468588042,2.96573126324121,2.94294910898684,3.1360657141493,4.19244567980995,4.21542542962113,3.09264700934367,1.77113784413652,2.54852331459277,3.25541726928209,5.70271226669025,3.61380285786655,3.58362511232371,1.24930726552346,2.60454977248419,5.74789597844733,1.41124720257313,1.33720097891754,2.02754165435919,2.43806866313962,2.01210257911091,3.70801429346238,2.53007406669196,3.50936537445123,4.63508860674636,1.5905718941022,7.29952305453954,2.83604451492204,2.88248216701333,2.45937399940753,1.70272798147026,4.73583874780305,7.04490441290416,2.27183175558278,2.26368658489047,2.12732736830184,7.87019060207628,6.86393892936153,10.0293525358983,2.58391129576717,1.72046919021225,2.08284300964557,2.82653970962005,5.45349267072878,3.02629846134074,2.29894463190492,2.84258435086262,1.42306505074684,1.00416183829401,3.62546385398232,3.80136052859256,2.68468263302986,2.94130464276695,5.67099363517232,0.714397826272638,0.898117490504679,2.13961812918312,1.53316637465883,2.84779697870439,4.39684185432977,2.63560834872127,0,6.97750483428055,2.98183171017191,3.03913227994991,2.91300197789081,1.14734648299525,2.12801029319014,2.80338800071154,2.1349799145941,4.44001587150888,1.24484414159907,3.09834545760283,3.43269996538263,3.02714855289863,1.72852777344,3.98346434117454,4.05808099879417,2.85235910772225,2.69007624993242,2.81842796745036,3.0755859429945,2.38766371393822,3.87892925384297,2.94802361548243,2.78979609174567,4.75201142912821,2.22540236350701,3.64064544775211,3.59309070908119,1.85169725349473,1.50142223846357,0.554128230968366,2.63386572528503,2.75839016219118,2.70428506031874,2.60894021268048,1.4351170855109,1.2813443329114,1.90738711043606,2.70081986475962,2.16410311400722,2.57640540045629,2.97786970130544,2.36286865137773,2.24105111870757,2.27190396819703,2.48534726334208,2.58633690910099,1.77504796258307,2.01504196455281,3.73033303083073,3.67195621010264,1.36373060295417,2.58124135850103,1.46368447355514,2.38553582978673,1.39432731443422,2.17688215532278,2.77552935963191,1.82488679537915,4.69348596989448,5.14592750554308,6.90674606762403,5.10804720835177,2.16563844500876,0.828147600278907,0.842923450390509,0.482022059766964,1.43382164552112,2.17879444092406,0.949082476444386,2.29213223872279,1.37355025587742,1.15424147083917,1.4763109092493,4.20725321410337,4.5273141246454,11.7606969108434,1.26755034821831,4.91413608338813,1.77236972004421,3.09024169590255,2.7057456479485,3.77449182656756,2.19500570817251,3.37205259772859,1.70899253099772,1.20364978706088,3.58389135841357,3.11980435583874,8.6598805215164,2.55046890945169,1.29149563659404,1.73239737313289,2.31492756288305,1.90254152234598,4.74122638775565,2.57545848628462,1.96973604869918,1.8720341211139,1.63494278517601,7.49870671894216,2.85569617938061,0.992425680696705,2.23896306757121,1.16253575405585,3.4504441124869,0.492663237895943,3.25779205848936,1.4512968087854,1.29707958075265,1.2624243342638,2.41291998310242,7.63976851116555,7.03304683260282,10.2643467613623,3.08482478109971,4.80548892550268,4.28739648945867,1.56983518083505,3.48768055066624,0.95339771567235,2.32689088364,14.3062578340753,3.381211010224,3.72313363218819,2.08014873822732,2.57207374262142,0,4.26275486425759,2.7165818795048,6.51145926469732,3.29296134712308,2.28015329005615,4.26470338491055,1.58390374586686,3.01439377059586,6.97226766880235,2.7992437530976,3.64871341923571,2.00902836572851,0,3.83399768786532,2.29723871668228,2.85273810081437,2.46128221334885,3.90405012845728,2.32779252211864,3.92298003977345,2.75843064282698,2.37190332345469,3.08023287071396,1.01637849688985,1.30139853857622,3.09315525111078,2.51274398001523,1.91381625495949,1.49801404789436,0,4.14415513436035,1.34960640891054,6.5022167737758,3.25518028439683,1.45579603071565,1.60586089917446,3.15404830067869,3.04567678981054,3.00946099727719,11.3703752027992,9.31257641632544,1.99267679560631,5.34670588770939,1.73767228936166,9.20265440074881,5.83343820478455,1.44737618286021,2.80428461064202,1.70764092485511,3.33440328590885,6.65741758041988,6.65258645325297,3.72161711728165,1.99500565274481,2.24528075546459,1.92208723883551,2.55853624533352,3.21707842287215,7.42090332224955,1.85051632563187,4.79416658345443,1.56041596426237,1.55776328755086,2.5566283261191,1.81289174387433,6.01519410909855,2.67034867914099,1.95184561879831,2.1850940160806,3.01586154406675,2.70719767744447,1.84836809050595,11.7652465376528,4.38417673959782,0.73886140225013,3.4120015221269,2.72149928442425,1.51141141271498,9.25363516141736,4.87703587578935,9.53210570324221,3.3133915495855,6.64860807142979,4.47749509444357,0.219259876645935,0.784306353074702,4.61610225209501,1.64007322849853,1.62689197332152,1.03041011647722,1.55668090191184,0.990113999047056,1.14853107599234,1.95018073810956,3.21367859688319,3.57681657680851,2.46477787383431,2.30255512089194,1.51620229732984,1.71872391789238,2.75531718437034,2.38634556765083,2.40386496246191,3.47098322258054,1.92190067365106,3.31793052485919,2.73126008309985,5.57814659156743,3.46293581513704,9.7585217822484,6.16067160352178,7.98459045475533,7.82939692867565,5.37440235401368,5.43874569619567,2.60510858551767,1.58189712359363,2.66882271493355,4.86205803491534,1.28381696410176,5.09125196681499,6.27958912159384,3.05783177891635,2.47083326762449,3.06312246098785,8.28948174450596,19.021238540761,7.58265221230166,5.36397112998549,4.14312932373184,8.45201174054043,2.45699840534374,2.68670320712054,3.39024349860728,4.96228809191512,7.29782872765342,6.57676327880644,1.73632660280006,2.62357900818653,6.69604243976923,5.88664646389525,8.169172473435,1.43411352204052,3.242218353433,3.92338156629375,3.19284957663538,1.26664581178598,3.62224382255892,3.79473173765715,5.59895552391973,2.69421915631434,8.71392958196524,3.26672954583968,2.16530741786592,3.44404298136984,6.73885902670502,6.20802214951346,1.37834040124176,2.53723804616085,3.0585488285695,1.70894156152249,2.85878130549347,1.64544909234478,3.24236655596359,2.16012574895246,2.37937552888281,1.70918513803957,6.73735898684351,1.71528151186722,1.67222857613147,1.298422916788,1.9919716137556,1.91311527274587,1.99579371432817,2.48956981172077,1.69338866179106,1.94773164164733,2.80797178113459,1.59764275323235,1.09675927041116,0,2.53937666702405,1.2847046008296,2.01799707191048,2.12923118845163,1.37402137902306,2.45792611446766,0.894704431569664,2.0021897005429,1.75849285861836,2.22724939116194,2.46174797895425,4.32729085561573,1.33228787199128,7.04935025439248,4.6785135102055,1.31857361344705,5.4612234787281,2.11742430127209,1.42068073403207,0.71623345421307,1.78178808499583,0.307160702099232,0,2.11004124615769,3.33926115068718,3.62568523298871,0.422250816255987,1.79323189425963,3.31540698637377,1.76352923497993,4.90889676010343,1.72318727645497,6.84287092855976,3.6846023970404,2.32727527078292,4.09257896181497,1.1837208676432,2.3948309234694,4.44547960578548,3.87733098438087,1.66982576691332,0,1.5625665665114,3.32347999985544,2.17499872630438,2.84483620713749,1.27126825146383,0.945550727071745,4.13692047889758,1.45802306691627,1.73624994933292,0,1.32656082487949,1.52581736317083,0.995213339381022,2.36438095162838,3.07139556015562,3.2681539055697,3.76444109552229,2.00070672109872,1.93701494939902,2.07507513949254,0.897576444097721,1.52106320690811,2.23300811812344,4.30508688988753,1.5991043280559,9.19739683761629,1.41282230755522,2.16075186470203,2.03036094555463,2.35275041181287,1.67821586975843,2.08729105996604,1.74830236878417,2.3209787098083,1.63232808159148,1.41353071433941,0.649165919226273,2.98578579323551,2.83064206410685,2.4441205797345,1.77912677208373,1.35920332841153,2.50612678813093,2.22423738836234,5.61804353109152,2.10838001152805,1.094728735294,2.54364004611717,1.45668227720456,5.12959723704208,0,0.61214552326098,1.20054501294127,4.35937916302028,2.28114021073944,0,1.65495977937749,2.19753042885058,1.19472429772959,2.56148591426813,1.94144542218394,1.73559738335131,1.17590876897253,2.61177619741208,1.92199335066233,1.20390222730132,1.64485763191445,1.75414361006845,1.72442459811739,2.03676934625681,1.5003541537555,1.58186518546373,2.05562886970126,3.97429223405979,1.83601308272048,3.12882212375685,1.84365286578528,1.49417096317547,2.19790570540343,2.3054466744657,1.94712213482057,1.37275998289572,0.864328787928898,1.98804056904692,2.35694034616795,2.58217991539867,1.77824838730966,2.65195365854437,2.31160471921215,2.40168115483916,1.36905378891993,7.66479528401834,3.43812353135966,3.94331031418972,2.23425921017803,1.60412296808179,2.15361907373044,2.59582700648688,4.29226048136571,4.01708623395371,2.35142153703542,3.60299883542404,0,1.41809728153003,1.15382201733633,1.61768505250044,1.96854963029498,2.28617996577618,0.795229689809303,1.36203406111576,4.34033500855552,5.22649859069488,4.15440338029185,0.449947783103001,0,1.45798935979259,0.335434687599266,2.91581117007033,1.99327434912993,1.37280437475228,2.33073541132698,1.91915197319445,2.1440859791201,1.32418394073086,2.034148301238,3.25799761052228,2.5926644736038,1.63293680054705,1.19730191562487,1.72394293573612,1.87426823963964,4.75910784384528,2.78449243988357,5.30027555648885,0.904980694530854,1.45455861916959,1.36869470307464,7.75296524548339,2.0289608387862,0.943225830597996,2.07119527673598,2.48083010905975,2.56895121467328,3.28840015628419,1.27668251554036,1.63205341010842,1.2534494701135,1.53172788381731,1.96723578425883,0.628216385000937,2.65820453990096,0.732157589411779,0.3755727921195,1.72022758707021,1.99672292766334,1.30402446176905,0.415045904808692,2.49960815924213,4.24617529116614,3.42558400253961,3.52898729547258,1.87333962322753,2.8984205722165,2.68658645196373,3.03827302801392,0.554805861502613,2.65164207385125,4.27665432979378,3.55924488638614,4.11912123114462,2.87338755150154,2.48699520932449,2.66139269981341,2.70804504178294,2.69881867298163,4.81315166316404,2.07353103920428,1.86089200190596,4.17396049449387,2.25386413495828,4.56966254602554,1.62748293281865,3.27327586564607,4.94088562395447,2.32016879939247,5.57334244178062,3.60024988196838,3.43395705182793,1.34699795506368,7.57109389371906,0.770479321629213,2.78774068787403,2.08795433572169,0.453411851024545,0.463044948647668,1.22368352253234,0.895444205407437,2.16161013012681,1.09642024789354,2.47364804324233,2.12205442098006,0.844712203265363,1.53744911152768,0.690860683462397,1.82315973706429,1.10606748921385,0.389720617678777,1.32864840313363,1.4720885483026,3.27609848846413,5.16123108382811,1.90180911022764,2.59983614611409,1.38699248602383,1.72214979660816,2.27006381426734,1.84105950251841,3.21722867754722,1.24415452006595,2.04630994085843,2.15649622793364,3.30258477897382,1.74735421107222,2.88545300921843,2.55089904122019,2.60265104943905,2.23457967189298,3.4980478571876,1.1829261750188,1.60114149657094,2.1160556621441,2.1437183414724,1.66995985250795,0,1.11743701340006,2.66651273512982,2.26864526599546,2.6971328461045,2.09918339321406,1.42769420259154,5.39812451755641,2.12345502025933,3.4851433719119,0.924205329202706,2.66967466827017,2.7614397042404,1.19349733269765,1.42899623863589,3.0255760305528,0.781514011233092,2.3571602503328,3.60298218522213,0.591424344868181,1.41828927698629,2.34323429584154,1.44680757550829,1.33173201407204,0.546974809018219,3.28954660114309,0.992422356778588,0.703484977438482,5.23825953322341,0.535701835878287,1.00885116665647,2.42786241694653,0.455324382702595,1.50794029276486,2.07421177600403,1.54339208493677,1.83518279037446,2.23627430113687,2.00929529502746,3.55940486054621,2.51177897121645,1.57115589916002,2.5224494698241,1.82631744101899,2.80705868584208,4.29976519098345,2.00134323694638,1.26410889386181,1.16241425368125,3.82488199065675,4.00855682365126,1.45051314914126,1.3657478167516,0.691259661814092,2.58136415292167,2.60330401607244,2.64161554753389,3.38709640152743,2.7492824225286,0.93061915699296,0,0.671132590786754,0.588901401691458,2.31644057466312,1.94228651156368,2.97722139883116,1.1598144313382,0.485710993059139,4.67878926924211,2.38740930193642,1.54596118010839,1.35535298446752,0.439762066981716,1.66059127923341,3.39566295674957,1.09279780251979,1.88126918544609,2.69663153929296,5.4205605833374,1.37415926980462,2.37637120261669,3.8039015482506,3.0586880643807,2.91350145737546,2.64277340691666,1.29923502702408,0.71421575442263,7.76368717774522,3.77134423439091,0,1.83491713361816,1.86341458096887,2.20880187070458,2.17572768610927,2.18175345170189,1.0580536810308,1.48798007266701,1.38652688589425,2.16313281061895,1.7663299476911,1.31118686356435,1.39368351112581,1.01988829741982,0,0.18378979906969,1.75495277504663,1.59135266258303,0.267964130156178,1.65833887891756,1.55149493792843,2.13233981900981,2.61870874610114,4.39204586884841,4.96597714366863,4.03674705290208,2.3549448562921,2.62752345645685,1.95945073107265,1.36893320434112,2.1552656964668,1.72133292942423,2.66128285236811,2.03508171527436,1.70763753404345,5.7921684686082,2.69475606319761,4.69281884806909,1.1001729976458,2.03448089157869,1.99727032255654,0.805095174364105,4.16739039994203 | |||
|short_description=p2@NUDT22 | |||
}} |
Revision as of 08:21, 11 January 2014
Short description: | p2@NUDT22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUDT22_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000537707_5end |
EntrezGene: | NUDT22 |
HGNC: | 28189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.83e-11 | 32 |
smooth muscle cell | 1.22e-10 | 43 |
smooth muscle myoblast | 1.22e-10 | 43 |
electrically responsive cell | 2.96e-10 | 61 |
electrically active cell | 2.96e-10 | 61 |
muscle precursor cell | 1.54e-09 | 58 |
myoblast | 1.54e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-09 | 58 |
muscle cell | 1.91e-09 | 55 |
embryonic cell | 4.32e-08 | 250 |