FFCP PHASE1:Hg19::chr11:71781096..71781147,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8059 | |||
|TSSclassifier=not | |||
|UniProt=F5H1L0,F5H4Y4,Q86XH4 | |||
|association_with_transcript=0bp_to_ENST00000534987,ENST00000535087,ENST00000535838,uc001orp.2_5end | |||
|description=CAGE_peak_3_at_NUMA1_5end | |||
|id=chr11:71781096..71781147,- | |||
|ontology_enrichment_celltype=CL:0000766!9.58e-31!76;CL:0000839!8.49e-29!70;CL:0000557!1.16e-28!71;CL:0002194!1.05e-27!63;CL:0000576!1.05e-27!63;CL:0000040!1.05e-27!63;CL:0000559!1.05e-27!63;CL:0002009!7.44e-27!65;CL:0002057!1.76e-23!42;CL:0000860!3.23e-21!45;CL:0000763!2.33e-19!112;CL:0000049!2.33e-19!112;CL:0002371!1.00e-18!591;CL:0000144!3.37e-13!625;CL:0000048!4.04e-11!430;CL:0000723!2.77e-10!436;CL:0000548!2.94e-10!679;CL:0000004!2.94e-10!679;CL:0000255!2.94e-10!679;CL:0000012!9.23e-10!682;CL:0002320!1.47e-09!365;CL:0000134!6.97e-09!358;CL:0000738!9.17e-09!140;CL:0000034!1.41e-08!444;CL:0000219!9.15e-08!390;CL:0002031!2.73e-07!124;CL:0000063!6.59e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.24e-19;39!CL:0000234;8.24e-19;39!CL:0000860;1.18e-18;33!CL:0002057;1.18e-18;33!CL:0000576;6.49e-17;48!CL:0000766;7.71e-15;69!CL:0000763;6.85e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.30e-33,72;CL:0000839,3.54e-31,66;CL:0000557,4.21e-31,67;CL:0002194,3.15e-30,59;CL:0000576,3.15e-30,59;CL:0000040,3.15e-30,59;CL:0000559,3.15e-30,59;CL:0002009,3.05e-29,61;CL:0000473,2.70e-27,48;CL:0000234,2.70e-27,48;CL:0000860,1.37e-23,42;CL:0002057,1.37e-23,42;CL:0000763,1.76e-20,108;CL:0000049,1.76e-20,108;CL:0000048,2.65e-11,427;CL:0000723,1.71e-10,433;CL:0002320,1.00e-09,361;CL:0000738,2.58e-09,136;CL:0000134,4.84e-09,354;CL:0000034,9.63e-09,441;CL:0000219,5.58e-08,386;CL:0002031,7.94e-08,120;CL:0002087,3.72e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-17;42!CL:0000049;5.92e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.66e-30!216;UBERON:0002193!1.18e-29!112;UBERON:0002390!1.10e-28!102;UBERON:0003061!1.10e-28!102;UBERON:0002371!1.68e-27!80;UBERON:0004765!4.45e-24!101;UBERON:0001434!4.45e-24!101;UBERON:0001474!6.11e-24!86;UBERON:0002204!4.83e-23!167;UBERON:0002405!5.49e-18!115;UBERON:0000926!5.82e-16!448;UBERON:0004120!5.82e-16!448;UBERON:0006603!5.82e-16!448;UBERON:0000480!1.01e-12!626;UBERON:0000467!2.24e-12!625;UBERON:0000468!8.26e-10!659;UBERON:0004535!1.16e-09!110;UBERON:0001009!2.63e-09!113;UBERON:0002384!1.06e-08!375;UBERON:0000055!1.03e-07!69;UBERON:0000479!1.29e-07!787;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0002049!4.03e-07!79;UBERON:0007798!4.03e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.82e-33,203;UBERON:0002193,2.59e-31,108;UBERON:0002390,2.00e-30,98;UBERON:0003061,2.00e-30,98;UBERON:0002371,1.80e-29,76;UBERON:0004765,3.93e-26,90;UBERON:0002405,4.62e-26,93;UBERON:0001434,4.63e-26,100;UBERON:0001474,9.72e-26,82;UBERON:0000926,9.19e-25,315;UBERON:0004120,9.19e-25,315;UBERON:0006603,9.19e-25,315;UBERON:0002204,3.18e-24,167;UBERON:0004535,1.03e-09,109;UBERON:0001009,2.37e-09,112;UBERON:0002050,4.50e-09,564;UBERON:0000923,6.22e-09,560;UBERON:0010316,6.22e-09,560;UBERON:0005291,6.22e-09,560;UBERON:0006598,6.22e-09,560;UBERON:0010317,6.22e-09,560;UBERON:0002532,6.22e-09,560;UBERON:0002384,6.96e-09,371;UBERON:0005423,7.06e-08,581;UBERON:0000055,9.10e-08,68;UBERON:0000479,1.08e-07,773;UBERON:0002049,3.68e-07,78;UBERON:0007798,3.68e-07,78 | |||
|phase1_expression=3.45188920614058,13.274232481241,4.51054093107108,5.00366491765652,4.46961094427288,0,7.59899634504932,11.370957721683,7.31319758959548,6.88055022204225,6.28021051175185,13.3249236999405,18.4636884759917,21.9066444739283,8.61633176892581,8.74022690387308,9.64311244838363,10.9546513558106,5.36726078669558,9.97280570421982,10.4040352534569,14.7323719094701,5.72471974262113,6.98059567871709,2.13422487311165,6.18948586558405,5.33653831424647,4.88006844144811,33.8293278090057,20.7267874972495,25.0802119772043,3.67768489791571,2.10844143144775,5.17655614233503,0.697204805222715,1.56386155736164,0.880801318004542,24.9297933839345,23.6642448014767,20.3990218472901,36.9460532495875,28.5026426096702,33.4848237924443,67.464782793718,51.7690042853669,52.8833253389439,56.01539789427,38.2386135860298,28.4929861223495,26.4677000936378,24.5914278267937,15.6078271726466,35.1640594351351,21.3009945582663,23.0225027210381,75.4851781565845,57.8561038122633,39.3266097778898,59.3802751199551,42.3626315740444,38.9995646737415,32.9851300186716,25.1324208603256,16.6227652707751,49.0453613282307,32.340957807395,37.3693349397345,28.1398505087552,26.5956288394303,19.3298071787554,35.1131711527354,26.8842674270922,21.5194423459801,15.8441464733956,16.1579267973433,17.4016675771952,35.0465329177065,27.4823713899957,41.7886525412408,12.2555479808737,13.7252507267372,16.2571096850524,0,0.546138611262131,1.77901850772711,1.70692089026603,0.800791974072025,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,1.12101712596307,2.89722493252585,0,0.393010762749165,0,0,0,0,0,0.891283655081389,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0.253019692019503,1.27426165729639,1.30216690771284,0.950452044448374,3.312652619711,3.07167866770604,6.24653632761729,3.55165878066025,0,1.41124720257313,0,0.289648807765598,2.43806866313962,2.68280343881454,1.53435074212236,9.03597880961416,9.5254203020819,14.4846518960824,24.6538643585841,17.5188553308949,14.8419662947587,9.97782288581538,10.1888351404026,9.43049343583531,6.9216104775583,4.44941331341315,18.8237488319716,20.0249197894157,25.9268023011787,3.10037811596945,1.14398982156026,0.371457501329565,31.2056979565727,11.1830497363796,20.8284300964557,2.26123176769604,9.22898759661793,20.9089711874451,20.6905016871442,5.68516870172524,4.98072767761394,8.70273593188143,18.1273192699116,8.36299316290364,5.12530320851156,22.0597848207521,16.2028389576352,9.10857228497614,5.38870494302808,3.15312145353302,7.66583187329416,13.2897192339538,13.923332538711,2.63560834872127,7.75560528296651,2.18047026071267,6.95760732373446,6.07826455989983,10.7251436458707,14.6286676581895,6.02936249737207,5.04609840128076,16.0123493594557,10.6067045819379,3.42332138939743,8.89090435659941,3.75962377160955,6.05429710579726,1.72852777344,15.4652145010306,10.9256026890612,6.84566185853339,7.17353666648645,1.52664848236894,2.42809416552197,2.66856532734272,28.1732756331753,9.9495797022532,25.108164825711,16.6320400019487,19.7813543422846,14.5625817910084,8.62341770179486,11.4468557488765,6.13080747372624,17.7321033909877,11.8523957637826,7.04921930337745,14.1223775372201,2.94923676216055,25.2939386321295,9.39652510801697,8.68920794754204,20.106103437655,8.34725486831355,30.9168648054755,12.6559462305481,23.6286865137773,12.764247676117,37.6126323623731,14.3597841881987,5.81925804547723,35.8559688441781,13.4000290642762,14.4126503463914,5.02478218224572,5.45492241181669,4.30206893083506,0,0.132529768321485,0,0.725627385107593,0.504641701751257,0.36497735907583,20.3384392028761,19.9404690839794,16.5761905622977,7.89425477654364,5.0531563716871,5.56041960187266,4.55178663210875,4.33819853790268,4.30146493656336,3.26819166138609,7.1181185733329,3.50561401216427,3.72820783738158,5.00171304030308,11.8104872739944,8.41450642820675,3.7041661019826,5.88034845542168,1.26755034821831,0.982827216677626,1.77236972004421,0,4.30459534900897,5.66173773985134,7.68251997860379,5.62008766288098,0.301586917234893,3.05541869023148,28.3453225619982,17.6788913497528,4.3299402607582,14.6072310268597,3.75707821554629,16.1690421492403,10.648666789262,9.32245345949531,0,0,51.459354272266,31.5905757937971,33.4420115149639,2.81201501960331,13.102605999511,6.09632918142262,7.07512329352502,5.52204483176528,1.53353071666084,34.979089890612,57.9358695807027,34.0018109486866,34.8770287269047,27.3946080535244,4.38135470615966,19.0994212779139,17.582617081507,13.6857956818164,3.08482478109971,8.10926256178577,4.85904935471983,3.1396703616701,0.87192013766656,1.7601188597028,4.26596662000667,28.6125156681506,4.22651376278,4.25500986535793,3.12022310734098,9.00225809917497,4.25547396069835,3.99633268524149,3.28849385413739,14.650783345569,10.70212437815,2.93162565864362,3.19852753868291,6.33561498346743,6.63166629531089,0.871533458600294,5.19859554146697,31.6221829667095,29.6331683944955,33.7334303172851,1.91699884393266,3.44585807502342,1.426369050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| |||
|short_description=p3@NUMA1 | |||
}} |
Revision as of 09:13, 11 January 2014
Short description: | p3@NUMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534987, ENST00000535087, ENST00000535838, uc001orp.2_5end |
EntrezGene: | NUMA1 |
HGNC: | 8059 |
UniProt: | F5H1L0F5H4Y4Q86XH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.30e-33 | 72 |
myeloid lineage restricted progenitor cell | 3.54e-31 | 66 |
granulocyte monocyte progenitor cell | 4.21e-31 | 67 |
monopoietic cell | 3.15e-30 | 59 |
monocyte | 3.15e-30 | 59 |
monoblast | 3.15e-30 | 59 |
promonocyte | 3.15e-30 | 59 |
macrophage dendritic cell progenitor | 3.05e-29 | 61 |
defensive cell | 2.70e-27 | 48 |
phagocyte | 2.70e-27 | 48 |
classical monocyte | 1.37e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-23 | 42 |
myeloid cell | 1.76e-20 | 108 |
common myeloid progenitor | 1.76e-20 | 108 |
multi fate stem cell | 2.65e-11 | 427 |
somatic stem cell | 1.71e-10 | 433 |
connective tissue cell | 1.00e-09 | 361 |
leukocyte | 2.58e-09 | 136 |
mesenchymal cell | 4.84e-09 | 354 |
stem cell | 9.63e-09 | 441 |
motile cell | 5.58e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 7.94e-08 | 120 |
nongranular leukocyte | 3.72e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.82e-33 | 203 |
hemolymphoid system | 2.59e-31 | 108 |
hematopoietic system | 2.00e-30 | 98 |
blood island | 2.00e-30 | 98 |
bone marrow | 1.80e-29 | 76 |
skeletal element | 3.93e-26 | 90 |
immune system | 4.62e-26 | 93 |
skeletal system | 4.63e-26 | 100 |
bone element | 9.72e-26 | 82 |
mesoderm | 9.19e-25 | 315 |
mesoderm-derived structure | 9.19e-25 | 315 |
presumptive mesoderm | 9.19e-25 | 315 |
musculoskeletal system | 3.18e-24 | 167 |
cardiovascular system | 1.03e-09 | 109 |
circulatory system | 2.37e-09 | 112 |
embryonic structure | 4.50e-09 | 564 |
germ layer | 6.22e-09 | 560 |
germ layer / neural crest | 6.22e-09 | 560 |
embryonic tissue | 6.22e-09 | 560 |
presumptive structure | 6.22e-09 | 560 |
germ layer / neural crest derived structure | 6.22e-09 | 560 |
epiblast (generic) | 6.22e-09 | 560 |
connective tissue | 6.96e-09 | 371 |
developing anatomical structure | 7.06e-08 | 581 |
vessel | 9.10e-08 | 68 |
tissue | 1.08e-07 | 773 |
vasculature | 3.68e-07 | 78 |
vascular system | 3.68e-07 | 78 |