FFCP PHASE1:Hg19::chr12:16500599..16500618,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7061 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000539708_5end | |||
|coexpression_cluster_id=C892 | |||
|description=CAGE_peak_2_at_MGST1_5end | |||
|id=chr12:16500599..16500618,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.40e-15!180;CL:0000057!1.70e-12!75;CL:0000136!7.78e-11!15;CL:0000680!3.71e-10!57;CL:0000056!3.71e-10!57;CL:0000355!3.71e-10!57;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679;CL:0000012!2.14e-09!682;CL:0000187!2.52e-09!54;CL:0000393!1.08e-08!60;CL:0000211!1.08e-08!60;CL:0000183!1.62e-07!59;CL:0002371!7.30e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.28e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.78e-13,76;CL:0000136,7.44e-11,15;CL:0000680,2.03e-10,58;CL:0000056,2.03e-10,58;CL:0000355,2.03e-10,58;CL:0000187,1.39e-09,55;CL:0000393,6.12e-09,61;CL:0000211,6.12e-09,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.64e-15!216;UBERON:0005256!1.12e-12!143;UBERON:0000914!3.04e-11!83;UBERON:0002329!3.04e-11!83;UBERON:0003077!3.04e-11!83;UBERON:0003059!3.04e-11!83;UBERON:0007282!3.04e-11!83;UBERON:0009618!3.04e-11!83;UBERON:0007285!3.04e-11!83;UBERON:0000468!3.36e-11!659;UBERON:0003104!1.03e-10!238;UBERON:0009142!1.03e-10!238;UBERON:0000486!1.38e-10!82;UBERON:0004290!1.75e-10!70;UBERON:0000475!1.76e-10!365;UBERON:0000490!4.78e-10!138;UBERON:0000481!1.32e-09!347;UBERON:0001013!9.33e-09!14;UBERON:0001134!1.31e-08!61;UBERON:0002036!1.31e-08!61;UBERON:0003082!1.31e-08!61;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000926!2.08e-08!448;UBERON:0004120!2.08e-08!448;UBERON:0006603!2.08e-08!448;UBERON:0001048!3.20e-08!168;UBERON:0000480!1.36e-07!626;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0000922!1.93e-07!612;UBERON:0000119!2.00e-07!312;UBERON:0000467!2.00e-07!625;UBERON:0000483!3.16e-07!309;UBERON:0000923!3.99e-07!604;UBERON:0005291!3.99e-07!604;UBERON:0006598!3.99e-07!604;UBERON:0002532!3.99e-07!604;UBERON:0002050!4.73e-07!605;UBERON:0005423!4.73e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.09e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.15e-13,199;UBERON:0005256,6.08e-13,122;UBERON:0000490,4.52e-12,148;UBERON:0003104,3.66e-11,160;UBERON:0009142,3.66e-11,160;UBERON:0000486,7.34e-11,83;UBERON:0002329,9.66e-11,71;UBERON:0003059,9.66e-11,71;UBERON:0007282,9.66e-11,71;UBERON:0004290,9.66e-11,71;UBERON:0009618,9.66e-11,71;UBERON:0003077,1.25e-10,72;UBERON:0007285,1.25e-10,72;UBERON:0007524,2.70e-10,73;UBERON:0001134,7.42e-09,62;UBERON:0002036,7.42e-09,62;UBERON:0003082,7.42e-09,62;UBERON:0001013,9.01e-09,14;UBERON:0002385,9.36e-09,64;UBERON:0001015,9.36e-09,64;UBERON:0000383,9.36e-09,64;UBERON:0007503,1.31e-08,78;UBERON:0000119,7.45e-08,309;UBERON:0000483,1.20e-07,306;UBERON:0001048,2.28e-07,160;UBERON:0003102,8.17e-07,99 | |||
|phase1_expression=127.719900627201,425.417740971384,216.9288279037,274.200837487577,485.399748548035,165.74431957907,580.056721005431,238.158392281915,375.846118979568,42.511971014761,37.6812630705111,9.61142037372758,9.75937819445278,88.3691760134733,106.378557608661,61.1815883271115,59.0640637463497,67.1885283156383,64.8950622391374,32.3808382741952,11.0160373271897,15.0458266309482,9.15955158819382,7.39121895393575,4.89616294419731,7.56492716904717,8.04585776609468,9.60271532026887,10.2274711980715,7.29275856384704,21.3646250176185,46.8904824484253,36.4459161721683,35.1266309658448,0,0,26.1304391008014,15.5118714388926,13.2359335330294,9.11445657006578,5.15005590751826,9.71680998056939,7.21211589375722,21.5189393393756,21.1610528465733,13.0995393041421,15.5727454726809,14.8020439687857,14.2464930611748,19.5630826779062,17.1627673374497,17.0267205519781,6.20542225325913,14.846147722428,12.1883837934908,22.2125960660274,30.8383949565366,21.7981779911732,16.2224462956578,16.0464513538047,8.31138263538754,23.0895910130701,15.9570926097305,17.9014395223732,15.381089647315,24.9649498864101,15.5705562248894,18.592401228999,23.4667313289091,20.1985625575758,17.5565855763677,20.6235476153036,18.6712808590122,8.02770087985379,8.71677629856678,12.5795187305026,32.7999602947766,42.6502375669878,37.7705128738138,1.42506371870624,1.59133341759272,2.00930569141097,0,0.546138611262131,0,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,6.60856642895129,6.72610275577843,27.1285607318329,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.76791966692651,1.24930726552346,0.473554504088034,0,0,0,0,138.969913798958,93.8981203585091,82.0877647035465,65.7819257339911,32.0856262806969,40.4121787900698,18.2915767821753,18.4921250715002,17.4889411753526,15.2993284249169,15.2832527106039,12.770459861027,52.0942262258335,34.8537376217364,61.9885521880445,65.821040699123,29.5166672351881,2.8618874916641,1.14398982156026,1.85728750664782,16.6960422188032,14.6239881168041,16.3156035755569,11.8714667804042,20.5554723742854,11.8300758034229,22.9894463190492,11.3703374034505,12.8075854567216,13.7235451233515,20.5442951725665,15.2054421143703,5.12530320851156,31.9866879900906,8.1014194788176,21.3426350598951,18.6359379279721,20.9457353698979,16.8648301212472,13.2897192339538,4.58004359826018,0,0,60.1809791956697,42.2426158941021,45.207092664255,57.5979936537502,150.876062513876,31.5654860156538,58.8711480149422,14.9448594021587,9.62003438826924,98.6538982217259,63.1793052006837,93.9905942902388,72.5002078419221,39.7561387891199,40.303286275413,83.3467405136956,62.7519003698894,60.5267156234794,58.1300768286636,44.6769326456043,54.2140113870679,75.7411975355654,27.7605557124596,73.0513272912662,23.7600571456411,19.2868204837274,93.7466202796167,43.1170885089743,28.9538116000994,22.8966891365694,42.1137455535958,26.3386572528503,33.1006819462941,36.507848314303,60.5727858074512,20.2710288328414,27.1217883799581,85.4085561673034,9.90300617078528,12.5724085670895,27.0522567047911,46.715330939229,36.6244640963548,45.4056444051186,37.6126323623731,50.1671947600531,69.5078044320891,59.9966211353078,42.2151291573813,33.9121184620975,18.1665201973499,14.7282905119051,9.46455164783713,31.5911898875652,32.0722039337994,31.1399766890309,19.0736341228282,44.156148903235,37.9576453438863,65.7088035785227,17.3675053312079,23.4829366299217,82.6574911896923,133.547704108873,50.8719240171329,51.7554998539772,50.6123162755312,46.3234685476055,53.1625843585471,48.4032062986637,49.6179214029405,59.6513253981052,58.4815678558513,4.42893272774789,9.81692416624121,31.2796248611864,26.4615680493976,311.817385661704,116.956438784637,177.827761911103,0,49.6873291714179,46.3233087806019,51.3631335712368,22.4803506515239,8.1428467653421,43.5165692245089,24.4356228982744,57.1964131903768,30.3095818253074,9.85408442288153,20.0768867143255,12.4155145074523,3.70388410061289,19.0254152234598,20.5453143469412,39.4903634563641,10.0948972495833,54.9910023077209,27.6453961857035,59.0523154116695,0.671928512795438,56.9935890914394,37.166786921682,64.5207343500995,30.6706143332169,0,0,0,0.432359860250884,0.25248486685276,2.92090313743978,5.34783795781589,1.17217447210047,51.3217338068116,10.5912317484423,13.2150945451324,18.0070652557264,31.396703616701,39.6723662638285,23.8349428918088,10.8588241236533,71.5312891703765,72.696036719816,75.7923632266881,68.6449083615016,42.1820093789913,21.2773698034917,29.3064396917709,133.970380057684,109.609564289071,49.3944202068461,63.8442921215721,132.205804932227,64.1481017076078,81.9915105602074,40.9620725542138,59.2839837709598,13.378615870531,23.6060832973099,29.5167515276244,43.3720988439765,35.6072001085753,35.6592262601796,79.9192812805037,41.9171698002782,53.8973499352086,0,0.985153801009636,0,0.513372145118994,1.27047312111232,0,3.09315525111078,2.84777651068393,1.91381625495949,0,0,0.828831026872071,77.6637142582155,48.5165405427887,78.9381218966231,18.717377537772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| |||
|short_description=p2@MGST1 | |||
}} |
Revision as of 12:29, 11 January 2014
Short description: | p2@MGST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MGST1_5end |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | 1bp_to_ENST00000539708_5end |
EntrezGene: | MGST1 |
HGNC: | 7061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.78e-13 | 76 |
fat cell | 7.44e-11 | 15 |
muscle precursor cell | 2.03e-10 | 58 |
myoblast | 2.03e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-10 | 58 |
muscle cell | 1.39e-09 | 55 |
electrically responsive cell | 6.12e-09 | 61 |
electrically active cell | 6.12e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.15e-13 | 199 |
trunk mesenchyme | 6.08e-13 | 122 |
unilaminar epithelium | 4.52e-12 | 148 |
mesenchyme | 3.66e-11 | 160 |
entire embryonic mesenchyme | 3.66e-11 | 160 |
multilaminar epithelium | 7.34e-11 | 83 |
somite | 9.66e-11 | 71 |
presomitic mesoderm | 9.66e-11 | 71 |
presumptive segmental plate | 9.66e-11 | 71 |
dermomyotome | 9.66e-11 | 71 |
trunk paraxial mesoderm | 9.66e-11 | 71 |
paraxial mesoderm | 1.25e-10 | 72 |
presumptive paraxial mesoderm | 1.25e-10 | 72 |
dense mesenchyme tissue | 2.70e-10 | 73 |
skeletal muscle tissue | 7.42e-09 | 62 |
striated muscle tissue | 7.42e-09 | 62 |
myotome | 7.42e-09 | 62 |
adipose tissue | 9.01e-09 | 14 |
muscle tissue | 9.36e-09 | 64 |
musculature | 9.36e-09 | 64 |
musculature of body | 9.36e-09 | 64 |
epithelial vesicle | 1.31e-08 | 78 |
cell layer | 7.45e-08 | 309 |
epithelium | 1.20e-07 | 306 |
primordium | 2.28e-07 | 160 |
surface structure | 8.17e-07 | 99 |