FFCP PHASE1:Hg19::chr12:49209348..49209399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1403 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZW7,F8W0F8,B7ZAK8 | |||
|association_with_transcript=0bp_to_ENST00000536187,ENST00000548874,ENST00000550168,ENST00000551716,ENST00000552465,NM_001206916_5end | |||
|description=CAGE_peak_2_at_CACNB3_5end | |||
|id=chr12:49209348..49209399,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.61e-17!180;CL:0000220!5.19e-15!246;CL:0002321!1.51e-14!248;CL:0000066!3.42e-11!254;CL:0000222!1.18e-10!119;CL:0000057!6.83e-09!75;CL:0002077!9.62e-07!33 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.21e-12,250;CL:0000222,4.73e-10,121;CL:0000057,5.83e-09,76;CL:0000066,2.09e-08,253;CL:0002077,6.29e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.67e-10!365;UBERON:0000119!4.19e-08!312;UBERON:0000064!4.44e-08!219;UBERON:0000483!7.72e-08!309;UBERON:0000481!1.30e-07!347;UBERON:0002049!6.41e-07!79;UBERON:0007798!6.41e-07!79;UBERON:0003102!7.40e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.25e-07,99;UBERON:0002049,9.57e-07,78;UBERON:0007798,9.57e-07,78 | |||
|phase1_expression=3.27021082687002,1.92690471501885,3.66481450649525,2.00146596706261,0.893922188854576,1.74467704820074,0,7.58063848112197,2.87304191019822,6.88055022204225,9.07141518364156,2.18441372130172,2.37390280405608,0.618831764800233,0.662794751455832,4.03395087871065,4.21886169616784,2.92124036154949,0.487932798790507,1.10808952269109,2.04000691244253,1.25381888591235,2.57612388417951,2.05311637609326,1.50651167513763,0.229240217243854,0,0.0787107813136792,0.393364276848904,0,0.309632246632152,7.35536979583142,8.433765725791,0.739508020333575,0,0,0.587200878669695,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.02290049474824,3.2529523714611,3.00802746381534,1.88300474649071,3.9764297352555,1.45990461090791,2.26883561193763,2.21729397462564,1.93236528524877,1.11332214173056,2.91436230634034,4.07862887062872,0,0,0,0.476981248610684,0,0,3.37896092523399,4.30117297553062,5.20710752411391,2.82653970962005,2.51699661725944,3.02629846134074,1.46296476575767,1.03366703667732,2.13459757612026,1.67360306382335,0.805658634218294,0,2.4406205754817,2.57364156242108,6.48113558305408,1.25019619597712,1.79623498100936,1.57656072676651,12.2653309972707,3.79706263827252,4.21364011039937,0,0,3.92484646928281,2.48485975847659,2.78587125662075,1.45650098894541,1.43418310374407,2.4826786753885,2.24271040056923,4.2699598291882,4.9333509683432,2.17847724779836,1.0776853765575,4.7403951902903,1.66493170409425,1.72852777344,3.28050004567315,4.05808099879417,2.85235910772225,2.69007624993242,1.64408298101271,1.13311061057692,3.23036855415172,1.02077085627447,3.68502951935304,1.03325781175765,1.18800285728205,1.23633464639278,6.37112953356618,3.59309070908119,3.36672227908132,1.50142223846357,3.3247693858102,2.19488810440419,1.5324389789951,2.10333282469236,2.49550802952046,3.22901344239952,1.49490172172997,2.54318281391474,6.00182192168805,1.95799805553034,1.8034837803194,2.41951913231067,6.24472429292685,2.33848812386877,3.02920529092937,1.84099797284599,4.52608959092673,2.84007674013291,2.72030665214629,6.78242369241951,1.93260853163297,2.45471508531751,1.72082757233402,0.365921118388786,0.397589304964456,1.16193942869518,0.518305275076852,1.00928340350251,0,0,1.92972281457866,5.52539685409922,1.39310378409594,2.88751792667834,3.07597680103594,4.21461725195254,6.7483088367375,4.41175890929576,3.92182999366331,3.79632990577755,3.64044532032444,3.33576490713088,4.61696588335668,1.4763109092493,7.01208869017229,4.5273141246454,7.3504355692771,0,0,0,2.6487785964879,0.860919069801795,2.40194934417936,5.81676512665715,0,2.41269533787914,1.01847289674383,0.651616610620649,6.23960871167747,1.44331342025273,2.20267769452646,0.939269553886573,1.87676382089396,0.462985512576611,1.33177906564219,2.37061319387782,4.29243081047436,0.738651018262192,0.234004265139238,1.0404181360211,2.81201501960331,3.35964256397719,2.83550194484773,1.25381931783988,0.871901815541886,2.30029607499127,0.492663237895943,0.176096868026452,0.207328115540772,0.432359860250884,0.75745460055828,8.50871783515065,6.875791660049,3.51652341630141,6.84289784090821,6.992269503826,6.30720421472227,2.85826432630578,2.69114602428866,2.1798003441664,2.0534720029866,1.29271715757778,0,1.690605505112,6.91439103120663,3.12022310734098,4.37252536245642,4.25547396069835,5.32844358032199,0.285955987316295,1.08524321078289,0.823240336780769,2.28015329005615,0.355391948742546,2.37585561880029,5.72734816413214,2.61460037580088,5.29856853264902,0,0.502257091432126,0,3.35474797688216,3.44585807502342,4.27910715122155,1.30303176000821,2.67119219315498,3.76028022803781,0.448340575974109,0,0,0,2.28685161800217,2.60279707715243,3.86644406388848,7.53823194004569,3.82763250991898,0,0,0,0.981531933753119,1.50051156317903,1.35632511849868,6.44709670745502,5.53129865271201,4.73107245101804,3.16281820480326,2.40756879782175,2.27407504055985,0,3.98535359121262,3.68738337083406,3.12781012085098,2.15381273209015,2.05886054286514,0.206768026122887,0,0,2.72814814301633,4.99306318531491,3.0239029332968,1.48864684691266,1.99500565274481,1.68396056659844,2.69092213436972,4.60536524160033,1.76939313257968,0,4.1636617326717,2.48586415438378,2.21743321237285,2.07701771673448,3.02146983995894,1.93375119346596,5.21316822788541,0.644566922551274,3.3296189967736,3.09554985611419,5.63834984325524,4.51199612907412,0.770153371044148,3.92174884588428,4.38417673959782,0.633309773357254,3.4120015221269,1.87103075804167,2.80690690932781,1.54227252690289,3.25135725052623,2.00675909541941,0.764628819135115,0.831076008928724,2.68649705666614,0,0,0.256450125116389,0.984043937099117,0,0.206082023295445,2.1060976908219,3.05285149706176,1.72279661398852,3.250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| |||
|short_description=p2@CACNB3 | |||
}} |
Revision as of 13:14, 11 January 2014
Short description: | p2@CACNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536187, ENST00000548874, ENST00000550168, ENST00000551716, ENST00000552465, NM_001206916_5end |
EntrezGene: | CACNB3 |
HGNC: | 1403 |
UniProt: | F5GZW7F8W0F8B7ZAK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.21e-12 | 250 |
mesodermal cell | 4.73e-10 | 121 |
fibroblast | 5.83e-09 | 76 |
epithelial cell | 2.09e-08 | 253 |
ecto-epithelial cell | 6.29e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.25e-07 | 99 |
vasculature | 9.57e-07 | 78 |
vascular system | 9.57e-07 | 78 |