FFCP PHASE1:Hg19::chr13:76391290..76391309,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=368bp_to_ENST00000532785_5end | |||
|coexpression_cluster_id=C3385 | |||
|description=CAGE_peak_16_at_LMO7_5end | |||
|id=chr13:76391290..76391309,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.56e-10!75;CL:0000055!7.44e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.83e-09;23!CL:0002580;3.80e-07;3!CL:0002579;4.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.79e-11,76;CL:0002620,3.36e-09,23;CL:0002580,3.38e-07,3;CL:0002579,3.73e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.00e-10;9!UBERON:0000042;2.00e-10;9!UBERON:0003688;9.55e-09;6!UBERON:0002358;9.55e-09;6!UBERON:0003684;9.55e-09;6!UBERON:0001178;9.55e-09;6!UBERON:0002097;5.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-09,41;UBERON:0003688,8.41e-09,6;UBERON:0002358,8.41e-09,6;UBERON:0003684,8.41e-09,6;UBERON:0001178,8.41e-09,6;UBERON:0004457,1.23e-07,12;UBERON:0000042,1.23e-07,12;UBERON:0002199,1.77e-07,46;UBERON:0002416,1.77e-07,46 | |||
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| |||
|short_description=p16@LMO7 | |||
}} |
Revision as of 18:05, 11 January 2014
Short description: | p16@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_16_at_LMO7_5end |
Coexpression cluster: | C3385_Fibroblast_mesenchymal_Preadipocyte_Adipocyte_amniotic_Ewing_Osteoblast |
Association with transcript: | 368bp_to_ENST00000532785_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.79e-11 | 76 |
skin fibroblast | 3.36e-09 | 23 |
preadipocyte of the breast | 3.38e-07 | 3 |
omentum preadipocyte | 3.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.62e-09 | 41 |
omentum | 8.41e-09 | 6 |
peritoneum | 8.41e-09 | 6 |
abdominal cavity | 8.41e-09 | 6 |
visceral peritoneum | 8.41e-09 | 6 |
cavity lining | 1.23e-07 | 12 |
serous membrane | 1.23e-07 | 12 |
integument | 1.77e-07 | 46 |
integumental system | 1.77e-07 | 46 |