FFCP PHASE1:Hg19::chr14:105945477..105945495,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2280 | |||
|description=CAGE_peak_at_chr14:105945477..105945495,+ | |||
|id=chr14:105945477..105945495,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.62e-08!119;CL:0000213!8.66e-08!57;CL:0000215!8.66e-08!57;CL:0000220!3.76e-07!246;CL:0002321!7.62e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000746;1.74e-10;7!CL:1000612;1.74e-10;7!CL:0002188;5.33e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.30e-10,7;CL:1000612,3.30e-10,7;CL:0002188,6.95e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.52e-10;3!DOID:127;6.52e-10;3!DOID:0060072;1.63e-07;4!DOID:114;2.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.32e-10,3;DOID:127,6.32e-10,3;DOID:0060072,1.60e-07,4;DOID:114,2.39e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004111!1.63e-08!241;UBERON:0000477!5.56e-08!286;UBERON:0000055!9.49e-08!69;UBERON:0002049!1.84e-07!79;UBERON:0007798!1.84e-07!79;UBERON:0000025!5.98e-07!194;UBERON:0001981!8.84e-07!60;UBERON:0007500!8.84e-07!60;UBERON:0004537!8.84e-07!60;UBERON:0006965!8.84e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.74e-10;7!UBERON:0001229;1.74e-10;7!UBERON:0007100;1.04e-07;25!UBERON:0005406;9.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004876,6.06e-12,11;UBERON:0000080,4.46e-11,9;UBERON:0002120,4.46e-11,9;UBERON:0004875,4.46e-11,9;UBERON:0005721,4.46e-11,9;UBERON:0005754,4.46e-11,9;UBERON:0007297,4.46e-11,9;UBERON:0010532,3.30e-10,7;UBERON:0000074,3.30e-10,7;UBERON:0001229,3.30e-10,7;UBERON:0001230,3.30e-10,7;UBERON:0003220,3.30e-10,7;UBERON:0005749,3.30e-10,7;UBERON:0004199,3.30e-10,7;UBERON:0004209,3.30e-10,7;UBERON:0004198,3.30e-10,7;UBERON:0003103,3.78e-09,68;UBERON:0005103,6.99e-09,8;UBERON:0000083,6.99e-09,8;UBERON:0009201,6.99e-09,8;UBERON:0006553,6.99e-09,8;UBERON:0003074,6.99e-09,8;UBERON:0003060,6.99e-09,8;UBERON:0000058,2.47e-08,19;UBERON:0003887,4.05e-08,12;UBERON:0003914,5.84e-08,117;UBERON:0005406,4.35e-07,2;UBERON:0007100,4.40e-07,27 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0,1.0007329835313,0,1.74467704820074,0,0,0,0,3.48900583986214,0,0,0.247532705920093,0,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0,0.612002073732759,0,0,0.821246550437305,1.12988375635323,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.786839080455332,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0.253019692019503,0.637130828648193,0,0,0,0,0,0.236777252044017,0,0,0.802320587350522,0,0,0,0.12786256184353,0,1.00267582127178,0.724232594804119,0,0.486634870302636,0.283604451492204,0.886917589850256,0.790513071238134,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0.79504962946682,0.860234595106124,0.694281003215189,0,0.838998872419812,4.67700671298115,0.835979866147242,0.516833518338658,0.71153252537342,0.66944122552934,0.402829317109147,0,2.92874469057803,0,10.5318453224629,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0.916008719652036,0,0,0.436094052142534,0,1.51956613997496,0,0.286836620748814,1.41867352879343,0.560677600142307,0,2.96001058100592,0,0.942974704487816,1.14423332179421,0,0.576175924479999,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.340296549480063,0.358779271377724,0.213557388818567,0.635795703478686,0,0.309157587715317,0.515281080091258,0.930584281657949,0,0.68205903612839,0.504867548488229,0.184099797284599,0.484938170456436,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,2.21446636387394,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.721832238805369,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.576479813667846,0.6312121671319,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0.901029173531752,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.499864955910285,0,0,0,1.67737398844108,2.29723871668228,0,0.868687840005475,1.02738161275192,0.358121926479791,0,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,0,0,0.234282829985426,0,2.27407504055985,0,0,0.368738337083406,0,0.195801157462741,1.02943027143257,0.206768026122887,0,0,0,0,0,0.496215615637554,0.61384789315225,0.561320188866147,0.256278298511402,0,0.321707842287215,2.96836132889982,0.154209693802656,0,0.0821271560138091,0,0.697262270759755,0,2.00506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,1.13733384070897,2.55140557914773,0.863663664408557,3.08454505380579,0,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.827019434907183,0.107420244868274,0.435050081742686,0.511359764496605,0.356128142586949,0.165284915360978,1.15314040419064,0.382838137483752,0.2023155617111,0.929691098594572,0.31481234683064,0,0,0,0,0.37064843820784,0.572499546967965,0,0,0.38126038784765,0,0,0,3.13979456079692,0,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,1.31178950409327,0,0.6196469961995,0.563391205064483,0,0.0982490410131212,0,0,1.05553817648832,0,0,0,0,0.670302275535787,2.17781969722645,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,1.45632626099416,0,0,1.90995587790152,0,1.53580351049616,0.994147647766298,0.140669416410513,1.00177834520615,0,1.26675244876796,0.996239941255349,0.828851746593443,0,0,0,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0.262379999988587,0,0.910347586283997,1.01701460117107,1.89110145414349,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,0.31593289814244,0,0,0,0.330991955875499,0,0,0,0.970722711091971,0.520679215005393,0,0,0.52418000472609,0.343972064943233,0.0967563312890851,0.219267951258557,0.164230914106418,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.85381197895741,10.1902900886886,0,0.572682980829578,0,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0,0,1.67569440763353,1.3749625440701,0,2.39614800598789,4.72148652950228,1.33902874465124,0.739018197353989,0,0,0.157566364614447,0.164831716762333,0,0.0984274815147488,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0.425246896606173,0,0.236417121897595,0.209818352539992,0.105600336519406,0,0.191915197319445,0.714695326373367,3.97255182219259,0.25426853765475,2.17199840701485,2.5926644736038,2.61269888087527,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0.5013797880454,0,0,0.314108192500469,0,0.976210119215705,0.1251909307065,0,0.110929051536852,0,0.276697269872462,0.249960815924213,0,0,0,0,0.869526171664951,0,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0.73927574994817,0.159296767163702,0,0,0.414706207840855,0.53168342911599,0.521745061811734,0.601030435988874,0.761610424337591,0.406870733204662,0.363697318405119,0.644463342254931,0.464033759878494,0.398095888698616,2.00013882331577,1.03018711554838,0.336749488765919,0,0,0,0.521988583930423,1.36023555307363,0.231522474323834,0.489473409012935,0.895444205407437,1.85280868296583,0.877136198314828,0.530067437837643,0,1.68942440653073,0.76872455576384,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.109209638192014,0.848662649770126,0,1.61116493536703,0,0.318004350653419,0,0,0.352675943690684,0,0.256916900385838,0,0,0.41023272848151,0.504143392443436,0.138314504928436,0,0,0,0,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,2.62035068016155,0,0.202612753855184,0.781078098613847,0.206686796501184,0.126831620387814,1.64092442705466,0.548257766857182,1.48863353516788,0.351742488719241,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0.171488009437418,0.135939465953663,0.131545547125698,0,0.111231401892069,0.078493092850514,0,0,0,0.431855182437243,0,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0.207216164163037,0.85359238546975,0,0,0,0.0852134047591577,1.69354820076372,0.9164274741762,3.41227024230752,0,0,0,0,0,0,0,0,0,0.795803100645473,0.356760272332706,0,0,0.150962843566674,0,0.655678681511872,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0.509781344063451,0.187967835959707,0.257831551894309,0,0,0.352894871715692,0,0,0.917458566809082,0.286679166302903,0.788857810965923,0.271965960763659,0.872701380680755,0,1.11598505450025,0.462175628631418,0.432626562123789,0,0.218531143927391,0.126698501011437,0,0,0.0918948995348449,0,0.530450887527676,0.535928260312357,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0.33639558774184,0,0.202117188958219,0.653150243690884,0.342233301085281,0.0673520530145875,0.143444410785353,0.99798106963804,0,0.106727345877715,0,0,0,0.611207220914332,0,0.665756774185513,0,0 | |||
|short_description=p@chr14:105945477..105945495,+ | |||
}} |
Revision as of 22:18, 11 January 2014
Short description: | p@chr14:105945477..105945495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105945477..105945495, + |
Coexpression cluster: | C2280_gastric_Endothelial_heart_Renal_serous_papillary_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.30e-10 | 7 |
kidney corpuscule cell | 3.30e-10 | 7 |
glomerular endothelial cell | 6.95e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
urogenital ridge | 6.06e-12 | 11 |
mesonephros | 4.46e-11 | 9 |
pronephros | 4.46e-11 | 9 |
nephrogenic cord | 4.46e-11 | 9 |
pronephric mesoderm | 4.46e-11 | 9 |
rostral part of nephrogenic cord | 4.46e-11 | 9 |
presumptive pronephric mesoderm | 4.46e-11 | 9 |
primitive nephron | 3.30e-10 | 7 |
renal glomerulus | 3.30e-10 | 7 |
renal corpuscle | 3.30e-10 | 7 |
glomerular capsule | 3.30e-10 | 7 |
metanephric mesenchyme | 3.30e-10 | 7 |
glomerular tuft | 3.30e-10 | 7 |
S-shaped body | 3.30e-10 | 7 |
renal vesicle | 3.30e-10 | 7 |
comma-shaped body | 3.30e-10 | 7 |
compound organ | 3.78e-09 | 68 |
mesonephric epithelium | 6.99e-09 | 8 |
mesonephric tubule | 6.99e-09 | 8 |
nephric duct | 6.99e-09 | 8 |
renal duct | 6.99e-09 | 8 |
mesonephric duct | 6.99e-09 | 8 |
pronephric duct | 6.99e-09 | 8 |
duct | 2.47e-08 | 19 |
intraembryonic coelom | 4.05e-08 | 12 |
epithelial tube | 5.84e-08 | 117 |
perirenal fat | 4.35e-07 | 2 |
primary circulatory organ | 4.40e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.32e-10 | 3 |
leiomyoma | 6.32e-10 | 3 |
benign neoplasm | 1.60e-07 | 4 |
heart disease | 2.39e-07 | 2 |