FFCP PHASE1:Hg19::chr14:106327961..106327980,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-162bp_to_DQ431661_5end | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_2_at_DQ431661_5end | |||
|id=chr14:106327961..106327980,- | |||
|ontology_enrichment_celltype=CL:0000945!1.23e-53!24;CL:0000826!1.23e-53!24;CL:0000542!3.38e-37!53;CL:0000051!3.38e-37!53;CL:0000838!1.82e-34!52;CL:0000236!3.58e-18!14;CL:0002087!1.30e-17!119;CL:0000738!4.62e-14!140;CL:0002031!9.78e-14!124;CL:0000988!2.18e-10!182;CL:0000037!2.46e-10!172;CL:0000566!2.46e-10!172;CL:0002032!5.35e-10!165;CL:0000837!5.35e-10!165;CL:0000785!3.12e-09!2;CL:0000955!3.12e-09!2;CL:0000818!3.12e-09!2;CL:0000954!3.12e-09!2;CL:0000816!3.12e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.72e-36;24!CL:0000542;1.14e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.77e-36,24;CL:0000826,1.77e-36,24;CL:0000542,2.37e-33,53;CL:0000051,2.37e-33,53;CL:0000838,1.54e-27,52;CL:0002087,5.96e-15,115;CL:0000738,1.46e-12,136;CL:0002031,1.53e-11,120;CL:0002032,1.62e-10,161;CL:0000837,1.62e-10,161;CL:0000037,4.75e-10,168;CL:0000988,1.67e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.14e-19;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.13e-25!10;DOID:2531!7.61e-08!51;DOID:0060083!7.61e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.08e-19;1!DOID:0070004;1.08e-19;1!DOID:12603;2.47e-19;1!DOID:0060060;4.28e-19;1!DOID:0060061;4.28e-19;1!DOID:8691;4.28e-19;1!DOID:0060058;1.22e-16;10!DOID:2531;9.26e-08;51!DOID:0060083;9.26e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.08e-19,1;DOID:0070004,1.08e-19,1;DOID:12603,2.71e-19,1;DOID:0060060,3.91e-19,1;DOID:0060061,3.91e-19,1;DOID:8691,3.91e-19,1;DOID:0060058,1.12e-16,10;DOID:2531,1.37e-12,51;DOID:0060083,1.37e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.99e-13!3;UBERON:0004854!3.99e-13!3;UBERON:0009034!3.99e-13!3;UBERON:0002095!3.99e-13!3;UBERON:0004782!3.99e-13!3;UBERON:0003281!3.99e-13!3;UBERON:0009664!3.99e-13!3;UBERON:0002296!3.99e-13!3;UBERON:0005602!3.99e-13!3;UBERON:0001179!3.99e-13!3;UBERON:0006293!3.99e-13!3;UBERON:0004177!1.74e-09!7;UBERON:0000178!2.67e-09!15;UBERON:0000179!2.67e-09!15;UBERON:0000463!2.67e-09!15;UBERON:0007023!2.44e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.16e-07,3;UBERON:0004854,3.16e-07,3;UBERON:0009034,3.16e-07,3;UBERON:0002095,3.16e-07,3;UBERON:0004782,3.16e-07,3;UBERON:0003281,3.16e-07,3;UBERON:0009664,3.16e-07,3;UBERON:0002296,3.16e-07,3;UBERON:0005602,3.16e-07,3;UBERON:0001179,3.16e-07,3;UBERON:0006293,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,3.20192298854788,3.30585281517453,0,0,0,0,0,0,1.78174561334694,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,1.32208974556972,0.954053754535364,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.822724546172388,0,0,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,43.2027667168354,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6804229599104,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,19.9769376406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751871343838829,0.0644578879735772,1.49911733887393,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0,0,0.740872583160463,0.430333232356058,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p2@DQ431661 | |||
}} |
Revision as of 22:21, 11 January 2014
Short description: | p2@DQ431661 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DQ431661_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | -162bp_to_DQ431661_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.77e-36 | 24 |
pro-B cell | 1.77e-36 | 24 |
lymphocyte | 2.37e-33 | 53 |
common lymphoid progenitor | 2.37e-33 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-27 | 52 |
nongranular leukocyte | 5.96e-15 | 115 |
leukocyte | 1.46e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.53e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-10 | 161 |
hematopoietic stem cell | 4.75e-10 | 168 |
hematopoietic cell | 1.67e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.16e-07 | 3 |
gastrointestinal system mesentery | 3.16e-07 | 3 |
stomach region | 3.16e-07 | 3 |
mesentery | 3.16e-07 | 3 |
gastrointestinal system serosa | 3.16e-07 | 3 |
mesentery of stomach | 3.16e-07 | 3 |
gut mesentery | 3.16e-07 | 3 |
dorsal mesentery | 3.16e-07 | 3 |
dorsal mesogastrium | 3.16e-07 | 3 |
peritoneal cavity | 3.16e-07 | 3 |
spleen primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.08e-19 | 1 |
myeloma | 1.08e-19 | 1 |
acute leukemia | 2.71e-19 | 1 |
non-Hodgkin lymphoma | 3.91e-19 | 1 |
cutaneous T cell lymphoma | 3.91e-19 | 1 |
mycosis fungoides | 3.91e-19 | 1 |
lymphoma | 1.12e-16 | 10 |
hematologic cancer | 1.37e-12 | 51 |
immune system cancer | 1.37e-12 | 51 |