FFCP PHASE1:Hg19::chr14:22918647..22918659,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-421bp_to_uc001wdx.3_5end | |||
|coexpression_cluster_id=C3410 | |||
|description=CAGE_peak_4_at_uc001wdx.3_5end | |||
|id=chr14:22918647..22918659,+ | |||
|ontology_enrichment_celltype=CL:0000625!4.62e-13!11;CL:0000791!1.48e-09!18;CL:0000789!1.48e-09!18;CL:0002420!1.48e-09!18;CL:0002419!1.48e-09!18;CL:0000790!1.48e-09!18;CL:0000136!1.74e-09!15;CL:0000623!3.60e-09!3;CL:0000825!3.60e-09!3;CL:0000767!8.84e-09!3;CL:0000842!1.00e-08!3;CL:0000037!1.74e-07!172;CL:0000566!1.74e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000623;7.68e-22;3!CL:0000767;8.15e-21;3!CL:0000226;1.49e-20;3!CL:0000842;1.49e-20;3!CL:0002127;1.65e-08;1!CL:0000911;1.65e-08;1!CL:0000814;1.65e-08;1!CL:0000094;3.94e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.42e-22,3;CL:0000825,7.42e-22,3;CL:0000767,8.16e-21,3;CL:0000226,1.14e-20,3;CL:0000842,1.14e-20,3;CL:0002127,1.65e-08,1;CL:0000914,1.65e-08,1;CL:0000911,1.65e-08,1;CL:0000814,1.65e-08,1;CL:0002042,1.65e-08,1;CL:0002039,1.65e-08,1;CL:0002040,1.65e-08,1;CL:0002041,1.65e-08,1;CL:0000094,3.94e-08,8;CL:0000037,4.08e-08,168;CL:0000988,1.54e-07,177;CL:0000738,6.48e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.37e-23!15;UBERON:0000179!4.37e-23!15;UBERON:0000463!4.37e-23!15;UBERON:0002390!2.87e-08!102;UBERON:0003061!2.87e-08!102;UBERON:0004177!5.84e-08!7;UBERON:0002193!1.04e-07!112;UBERON:0007023!8.53e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.82e-52;15!UBERON:0000179;7.82e-52;15!UBERON:0000463;7.82e-52;15!UBERON:0002390;6.27e-22;32!UBERON:0002193;4.59e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.84e-52,15;UBERON:0000179,7.84e-52,15;UBERON:0000463,7.84e-52,15;UBERON:0002390,1.58e-10,98;UBERON:0003061,1.58e-10,98;UBERON:0002193,2.57e-09,108 | |||
|phase1_expression=0,0.856402095563933,0,0,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,4.32700704533794,4.22212337906934,1.39334510984468,0,0,0,0,0,0,0,2.4065333696417,2.38711957787437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,2.24203425192614,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1402607350679,5.71389204585589,14.4470475155877,12.9626466642546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,3.66714141391649,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,5.58192370155386,3.0585488285695,3.98753031021914,2.38231775457789,4.93634727703433,0.648473311192717,1.08006287447623,3.17250070517708,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63948020351398,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,2.54298526368606,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29859058098149,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0.427149650270779,0,0,0,0,0.243585196761792,0,1.63205341010842,0.2506898940227,3.06345576763462,5.90170735277648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@uc001wdx.3 | |||
}} |
Revision as of 19:06, 11 January 2014
Short description: | p4@uc001wdx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc001wdx.3_5end |
Coexpression cluster: | C3410_NK_Natural_Whole_mature_blood_acute_Basophils |
Association with transcript: | -421bp_to_uc001wdx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.42e-22 | 3 |
pro-NK cell | 7.42e-22 | 3 |
basophil | 8.16e-21 | 3 |
single nucleate cell | 1.14e-20 | 3 |
mononuclear cell | 1.14e-20 | 3 |
innate effector T cell | 1.65e-08 | 1 |
immature NK T cell | 1.65e-08 | 1 |
effector T cell | 1.65e-08 | 1 |
mature NK T cell | 1.65e-08 | 1 |
immature NK T cell stage IV | 1.65e-08 | 1 |
immature NK T cell stage I | 1.65e-08 | 1 |
immature NK T cell stage II | 1.65e-08 | 1 |
immature NK T cell stage III | 1.65e-08 | 1 |
granulocyte | 3.94e-08 | 8 |
hematopoietic stem cell | 4.08e-08 | 168 |
hematopoietic cell | 1.54e-07 | 177 |
leukocyte | 6.48e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 7.84e-52 | 15 |
haemolymphatic fluid | 7.84e-52 | 15 |
organism substance | 7.84e-52 | 15 |
hematopoietic system | 1.58e-10 | 98 |
blood island | 1.58e-10 | 98 |
hemolymphoid system | 2.57e-09 | 108 |