FFCP PHASE1:Hg19::chr14:93118431..93118444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-401bp_to_ENST00000556418_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_23_at_RIN3_5end | |||
|id=chr14:93118431..93118444,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.77e-37!172;CL:0000566!4.77e-37!172;CL:0000988!6.48e-34!182;CL:0000738!1.07e-33!140;CL:0002032!4.89e-32!165;CL:0000837!4.89e-32!165;CL:0002031!4.50e-23!124;CL:0002087!4.58e-22!119;CL:0000763!5.74e-21!112;CL:0000049!5.74e-21!112;CL:0000766!1.83e-18!76;CL:0002057!1.23e-14!42;CL:0000557!1.97e-14!71;CL:0000839!2.16e-13!70;CL:0000860!2.92e-13!45;CL:0000838!1.60e-10!52;CL:0002274!3.10e-10!5;CL:0000457!3.10e-10!5;CL:0002191!3.10e-10!5;CL:0000097!3.10e-10!5;CL:0000831!3.10e-10!5;CL:0002028!3.10e-10!5;CL:0000542!3.22e-10!53;CL:0000051!3.22e-10!53;CL:0000134!3.78e-10!358;CL:0002320!1.31e-09!365;CL:0002194!1.74e-09!63;CL:0000576!1.74e-09!63;CL:0000040!1.74e-09!63;CL:0000559!1.74e-09!63;CL:0002009!5.12e-09!65;CL:0000219!9.61e-08!390;CL:0000775!1.59e-07!3;CL:0000034!2.30e-07!444;CL:0000623!2.77e-07!3;CL:0000825!2.77e-07!3;CL:0000048!3.52e-07!430;CL:0000842!4.30e-07!3;CL:0000094!7.51e-07!8;CL:0000723!7.72e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000094;9.72e-29;8!CL:0000775;1.87e-28;3!CL:0000081;6.77e-21;11!CL:0000097;2.39e-17;5!CL:0000767;3.25e-13;3!CL:0000623;4.69e-13;3!CL:0000226;7.40e-13;3!CL:0000842;7.40e-13;3!CL:0002032;1.03e-10;1!CL:0000557;1.03e-10;1!CL:0000163;6.98e-10;9!CL:0000766;8.92e-09;69!CL:0002393;5.84e-07;6!CL:0002397;5.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.12e-28,8;CL:0000775,2.06e-28,3;CL:0000738,5.85e-21,136;CL:0000081,7.52e-21,11;CL:0000037,1.69e-18,168;CL:0000097,1.87e-17,5;CL:0002028,1.87e-17,5;CL:0000988,2.08e-17,177;CL:0002032,2.28e-15,161;CL:0000837,2.28e-15,161;CL:0000766,1.81e-13,72;CL:0000767,3.57e-13,3;CL:0000623,4.03e-13,3;CL:0000825,4.03e-13,3;CL:0000226,1.00e-12,3;CL:0000842,1.00e-12,3;CL:0000763,3.51e-10,108;CL:0000049,3.51e-10,108;CL:0000163,6.10e-10,9;CL:0002031,7.71e-09,120;CL:0002087,1.32e-07,115;CL:0000134,3.89e-07,354;CL:0002320,6.20e-07,361;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.02e-17!102;UBERON:0003061!3.02e-17!102;UBERON:0002193!9.72e-15!112;UBERON:0002371!4.74e-13!80;UBERON:0001474!1.34e-12!86;UBERON:0004765!1.61e-09!101;UBERON:0001434!1.61e-09!101;UBERON:0002405!1.81e-09!115;UBERON:0002384!2.03e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.382067028739756,0.985207073399349,0.550975469195755,4.72037132218685,0,1.54816123316076,0,0,0,0,0,0.587200878669695,0.553995408531877,2.20598892217156,1.73608696572681,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0.752969358170419,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0.598390972864896,0,0,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0,0.44931452458598,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,1.91136614062614,1.32171328579026,3.92355994087075,0,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,44.8323546485309,0.088048434013226,1.86595303986695,5.33243827642757,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,1.77327684181734,0.862510299438069,2.95188983443421,0,0,0,0,0,3.74503511973591,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0.280797178113459,0,0,0,0.846458889008016,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p23@RIN3 | |||
}} |
Revision as of 21:35, 11 January 2014
Short description: | p23@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RIN3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -401bp_to_ENST00000556418_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.12e-28 | 8 |
neutrophil | 2.06e-28 | 3 |
leukocyte | 5.85e-21 | 136 |
blood cell | 7.52e-21 | 11 |
hematopoietic stem cell | 1.69e-18 | 168 |
mast cell | 1.87e-17 | 5 |
basophil mast progenitor cell | 1.87e-17 | 5 |
hematopoietic cell | 2.08e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.28e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-15 | 161 |
myeloid leukocyte | 1.81e-13 | 72 |
basophil | 3.57e-13 | 3 |
natural killer cell | 4.03e-13 | 3 |
pro-NK cell | 4.03e-13 | 3 |
single nucleate cell | 1.00e-12 | 3 |
mononuclear cell | 1.00e-12 | 3 |
myeloid cell | 3.51e-10 | 108 |
common myeloid progenitor | 3.51e-10 | 108 |
endocrine cell | 6.10e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 7.71e-09 | 120 |
nongranular leukocyte | 1.32e-07 | 115 |
mesenchymal cell | 3.89e-07 | 354 |
connective tissue cell | 6.20e-07 | 361 |
stem cell | 9.09e-07 | 441 |