FFCP PHASE1:Hg19::chr15:79383102..79383127,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9875 | |||
|TSSclassifier=strong | |||
|UniProt=Q13972 | |||
|association_with_transcript=0bp_to_ENST00000419573,ENST00000558480_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RASGRF1_5end | |||
|id=chr15:79383102..79383127,- | |||
|ontology_enrichment_celltype=CL:0002322!4.20e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.82e-08;3!CL:0000349;3.60e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.60e-08,3;CL:0000349,3.38e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.47e-19;82!UBERON:0006215;6.20e-10;3!UBERON:0006241;2.60e-09;3!UBERON:0003057;2.60e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.47e-68!57;UBERON:0005068!6.47e-68!57;UBERON:0006241!6.47e-68!57;UBERON:0007135!6.47e-68!57;UBERON:0001017!4.58e-58!82;UBERON:0003075!2.61e-57!86;UBERON:0007284!2.61e-57!86;UBERON:0005743!9.85e-57!86;UBERON:0002616!3.00e-56!59;UBERON:0002346!6.40e-54!90;UBERON:0002780!1.54e-53!41;UBERON:0001890!1.54e-53!41;UBERON:0006240!1.54e-53!41;UBERON:0000955!3.66e-52!69;UBERON:0006238!3.66e-52!69;UBERON:0003080!5.62e-52!42;UBERON:0000073!6.67e-52!94;UBERON:0001016!6.67e-52!94;UBERON:0007023!1.28e-51!115;UBERON:0003056!3.29e-44!61;UBERON:0001893!6.28e-43!34;UBERON:0002020!8.37e-43!34;UBERON:0003528!8.37e-43!34;UBERON:0002791!3.45e-41!33;UBERON:0001869!1.01e-39!32;UBERON:0002619!1.77e-34!22;UBERON:0004121!4.51e-34!169;UBERON:0000924!8.48e-33!173;UBERON:0006601!8.48e-33!173;UBERON:0000153!1.53e-32!129;UBERON:0007811!1.53e-32!129;UBERON:0000033!1.69e-32!123;UBERON:0001950!2.75e-31!20;UBERON:0000956!1.30e-29!25;UBERON:0000203!1.30e-29!25;UBERON:0003076!2.35e-16!15;UBERON:0003057!2.35e-16!15;UBERON:0000064!4.19e-15!219;UBERON:0002308!1.22e-14!9;UBERON:0000125!1.22e-14!9;UBERON:0002420!1.26e-14!9;UBERON:0007245!1.26e-14!9;UBERON:0010009!1.26e-14!9;UBERON:0010011!1.26e-14!9;UBERON:0000454!1.26e-14!9;UBERON:0000025!3.33e-14!194;UBERON:0004732!1.88e-13!13;UBERON:0005631!3.71e-12!14;UBERON:0000158!3.71e-12!14;UBERON:0001894!7.08e-12!7;UBERON:0006222!7.08e-12!7;UBERON:0004733!8.17e-12!12;UBERON:0002028!8.17e-12!12;UBERON:0007277!8.17e-12!12;UBERON:0009663!1.87e-11!7;UBERON:0000200!2.27e-11!6;UBERON:0002298!4.05e-11!8;UBERON:0003124!8.45e-11!7;UBERON:0001871!9.89e-11!7;UBERON:0000477!2.43e-10!286;UBERON:0000062!4.53e-10!511;UBERON:0004111!5.12e-10!241;UBERON:0001872!1.39e-09!5;UBERON:0000349!1.66e-09!5;UBERON:0002021!1.72e-09!5;UBERON:0000483!2.20e-09!309;UBERON:0000119!3.99e-09!312;UBERON:0000475!3.82e-08!365;UBERON:0002680!1.82e-07!9;UBERON:0001895!1.82e-07!9;UBERON:0010092!1.82e-07!9;UBERON:0003296!3.43e-07!4;UBERON:0010133!3.43e-07!4;UBERON:0000922!3.47e-07!612;UBERON:0000369!5.32e-07!4;UBERON:0002435!5.32e-07!4;UBERON:0000204!5.32e-07!4;UBERON:0010082!5.32e-07!4;UBERON:0001987!6.25e-07!4;UBERON:0004340!6.25e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.54e-49;53!UBERON:0002616;2.54e-49;53!UBERON:0002780;5.00e-48;41!UBERON:0001890;5.00e-48;41!UBERON:0001893;1.56e-45;34!UBERON:0002619;1.61e-45;22!UBERON:0003528;2.51e-43;34!UBERON:0002020;2.51e-43;34!UBERON:0001869;1.28e-42;32!UBERON:0002791;2.15e-42;32!UBERON:0001950;1.58e-40;20!UBERON:0000956;1.38e-39;25!UBERON:0000203;1.38e-39;25!UBERON:0000955;4.38e-33;68!UBERON:0001017;1.89e-32;75!UBERON:0001016;6.41e-26;83!UBERON:0004732;4.38e-21;13!UBERON:0004733;1.81e-18;12!UBERON:0002028;1.81e-18;12!UBERON:0001894;7.84e-18;7!UBERON:0002298;4.47e-17;6!UBERON:0000200;4.54e-17;6!UBERON:0007023;2.60e-16;114!UBERON:0000349;3.85e-14;5!UBERON:0000125;4.29e-14;9!UBERON:0002308;4.29e-14;9!UBERON:0002420;4.43e-14;9!UBERON:0007245;4.43e-14;9!UBERON:0010009;4.43e-14;9!UBERON:0010011;4.43e-14;9!UBERON:0000454;4.43e-14;9!UBERON:0001871;6.94e-14;6!UBERON:0002680;1.61e-11;9!UBERON:0001895;1.61e-11;9!UBERON:0002784;3.87e-11;4!UBERON:0011216;1.01e-10;132!UBERON:0003296;2.05e-10;4!UBERON:0010133;2.05e-10;4!UBERON:0001872;4.65e-10;5!UBERON:0002021;7.29e-10;5!UBERON:0000988;1.73e-09;3!UBERON:0009663;1.84e-09;7!UBERON:0002240;2.60e-09;3!UBERON:0005174;2.60e-09;3!UBERON:0001137;2.60e-09;3!UBERON:0001896;2.72e-09;3!UBERON:0005290;2.72e-09;3!UBERON:0001870;2.79e-09;3!UBERON:0005631;1.79e-08;10!UBERON:0000158;1.79e-08;10!UBERON:0010314;2.02e-08;132!UBERON:0003124;8.82e-08;3!UBERON:0000920;8.82e-08;3!UBERON:0005162;4.51e-07;2!UBERON:0000122;4.51e-07;2!UBERON:0000478;7.57e-07;24!UBERON:0002148;9.76e-07;2!UBERON:0006331;9.76e-07;2!UBERON:0009662;9.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.38e-95,56;UBERON:0005068,4.38e-95,56;UBERON:0006241,4.38e-95,56;UBERON:0007135,4.38e-95,56;UBERON:0000073,3.08e-87,53;UBERON:0002616,3.08e-87,53;UBERON:0000955,6.89e-75,68;UBERON:0006238,6.89e-75,68;UBERON:0001017,6.74e-74,81;UBERON:0003075,1.98e-73,82;UBERON:0007284,1.98e-73,82;UBERON:0002346,1.96e-69,86;UBERON:0002780,4.93e-69,41;UBERON:0001890,4.93e-69,41;UBERON:0003080,4.93e-69,41;UBERON:0006240,4.93e-69,41;UBERON:0001016,1.51e-68,89;UBERON:0003056,2.21e-55,61;UBERON:0010371,3.20e-55,104;UBERON:0001893,1.03e-52,34;UBERON:0003528,1.54e-52,34;UBERON:0002020,1.54e-52,34;UBERON:0007023,1.60e-52,114;UBERON:0001869,7.50e-48,32;UBERON:0002791,1.23e-47,32;UBERON:0002619,1.43e-45,22;UBERON:0010314,8.63e-43,132;UBERON:0001950,1.39e-40,20;UBERON:0000956,1.24e-39,25;UBERON:0000203,1.24e-39,25;UBERON:0004121,4.49e-39,171;UBERON:0000924,4.49e-39,171;UBERON:0006601,4.49e-39,171;UBERON:0003076,9.87e-26,15;UBERON:0003057,9.87e-26,15;UBERON:0011216,2.62e-25,223;UBERON:0004732,4.25e-21,13;UBERON:0000025,2.51e-20,192;UBERON:0004733,1.76e-18,12;UBERON:0002028,1.76e-18,12;UBERON:0007277,1.76e-18,12;UBERON:0001894,7.06e-18,7;UBERON:0006222,7.06e-18,7;UBERON:0002298,4.35e-17,6;UBERON:0000200,4.48e-17,6;UBERON:0004111,1.05e-14,240;UBERON:0000349,3.96e-14,5;UBERON:0000125,4.34e-14,9;UBERON:0002308,4.34e-14,9;UBERON:0002420,4.52e-14,9;UBERON:0007245,4.52e-14,9;UBERON:0010009,4.52e-14,9;UBERON:0010011,4.52e-14,9;UBERON:0000454,4.52e-14,9;UBERON:0001871,5.91e-14,6;UBERON:0005631,6.57e-13,14;UBERON:0000158,6.57e-13,14;UBERON:0000483,1.90e-12,306;UBERON:0000119,3.34e-12,309;UBERON:0003124,3.88e-12,7;UBERON:0002680,1.58e-11,9;UBERON:0001895,1.58e-11,9;UBERON:0010092,1.58e-11,9;UBERON:0002784,3.57e-11,4;UBERON:0003296,1.78e-10,4;UBERON:0010133,1.78e-10,4;UBERON:0001872,4.76e-10,5;UBERON:0002021,7.29e-10,5;UBERON:0000988,1.71e-09,3;UBERON:0009663,1.87e-09,7;UBERON:0002240,2.53e-09,3;UBERON:0005174,2.53e-09,3;UBERON:0001137,2.53e-09,3;UBERON:0001896,2.68e-09,3;UBERON:0005290,2.68e-09,3;UBERON:0010096,2.68e-09,3;UBERON:0001870,2.75e-09,3;UBERON:0000920,8.60e-08,3;UBERON:0005162,4.58e-07,2;UBERON:0000122,4.58e-07,2;UBERON:0000478,7.29e-07,24;UBERON:0002148,9.62e-07,2;UBERON:0006331,9.62e-07,2;UBERON:0009662,9.62e-07,2;UBERON:0002702,9.90e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,1.33037638477538,0.87834785693126,6.09052701064364,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.69716365721711,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40194934417936,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,6.65741758041988,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,10.3937638291424,7.98617825458003,36.783462967353,17.3023382184931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0799823828566,32.8399067492953,9.98068990005971,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,45.774520895125,53.2992032868503,34.5790714175651,25.8874768641688,0,0,0.153900517007594,0,0.922255617552241,2.42345639906385,3.04212641381623,1.27600463892768,1.19076871422421,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5437302349569,0,25.0662956926113,0,0.19566461893209,0,0.394584402849391,0,1.83643656978294,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,2.03382666702479,0,0,30.0093172830865,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60672461935663,11.5000518269274,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,34.1948766618,15.1185780783849,0.321506296930038,0.137539436597234,0.415440338029185,0,0,32.3795136987271,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6743243085799,28.6944745781637,0,0,0.106787412567695,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0,33.6705908387455,22.9409378015691,24.287040557061,20.6427310448426,24.2934622865707,48.8698691148688,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0.303859956177382,19.6326979335458,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2875411084715,39.6750413711638,26.9781221806586,33.2288510070023,0.756215088665154,56.5706325157302,26.1590545923599,62.8185449140279,0,0,0,0,0,0,1.39241355481392,0.300841313397029,0,0.781514011233092,3.92860041722134,0,0,44.2371179250485,36.7106706348508,35.1367554052013,43.1227509318566,0.546974809018219,0,0,0,0,12.8568440610789,2.69026977775059,4.85572483389305,1.36597314810779,2.12885688390333,0,0,41.3935673828905,49.1322618514483,0,0,1.33438257845874,5.18481446722806,0,0,0,0,2.43020250200632,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.9798224753108,39.8042176438295,12.679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,25.8011249672612,1.10440093535229,49.2258388982222,2.61810414204226,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,0,0,0.267964130156178,33.1667775783512,17.790475288246,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@RASGRF1 | |||
}} |
Revision as of 00:47, 12 January 2014
Short description: | p1@RASGRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASGRF1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000419573, ENST00000558480_5end |
EntrezGene: | RASGRF1 |
HGNC: | 9875 |
UniProt: | Q13972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.60e-08 | 3 |
extraembryonic cell | 3.38e-07 | 19 |