FFCP PHASE1:Hg19::chr16:55542958..55542972,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26032 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L5N7 | |||
|association_with_transcript=45bp_to_NM_017839,uc002eie.3_5end | |||
|coexpression_cluster_id=C3571 | |||
|description=CAGE_peak_3_at_LPCAT2_5end | |||
|id=chr16:55542958..55542972,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.62e-23!112;CL:0000049!3.62e-23!112;CL:0000766!1.56e-21!76;CL:0000557!9.45e-20!71;CL:0000839!1.89e-18!70;CL:0002009!1.73e-16!65;CL:0002194!3.34e-16!63;CL:0000576!3.34e-16!63;CL:0000040!3.34e-16!63;CL:0000559!3.34e-16!63;CL:0002057!9.57e-14!42;CL:0000860!1.16e-11!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.03e-13;39!CL:0000234;1.03e-13;39!CL:0000860;6.36e-13;33!CL:0002057;6.36e-13;33!CL:0000766;3.14e-12;69!CL:0000576;7.55e-10;48!CL:0000763;9.88e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.98e-26,108;CL:0000049,1.98e-26,108;CL:0000766,2.81e-26,72;CL:0000557,2.23e-23,67;CL:0000839,1.22e-21,66;CL:0002194,1.39e-19,59;CL:0000576,1.39e-19,59;CL:0000040,1.39e-19,59;CL:0000559,1.39e-19,59;CL:0002009,1.80e-19,61;CL:0000473,3.02e-19,48;CL:0000234,3.02e-19,48;CL:0000860,6.51e-16,42;CL:0002057,6.51e-16,42;CL:0002032,8.46e-08,161;CL:0000837,8.46e-08,161;CL:0000037,3.31e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;8.05e-12;42!CL:0000049;4.39e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.39e-18!216;UBERON:0002371!5.72e-16!80;UBERON:0002390!7.13e-15!102;UBERON:0003061!7.13e-15!102;UBERON:0002193!1.46e-14!112;UBERON:0001474!1.91e-13!86;UBERON:0000467!3.10e-13!625;UBERON:0000480!5.98e-13!626;UBERON:0004765!1.15e-11!101;UBERON:0001434!1.15e-11!101;UBERON:0000468!1.84e-11!659;UBERON:0002204!1.07e-09!167;UBERON:0000062!4.06e-09!511;UBERON:0002050!5.20e-09!605;UBERON:0005423!5.20e-09!605;UBERON:0000923!7.20e-09!604;UBERON:0005291!7.20e-09!604;UBERON:0006598!7.20e-09!604;UBERON:0002532!7.20e-09!604;UBERON:0002405!8.43e-09!115;UBERON:0000922!1.20e-08!612;UBERON:0000926!2.55e-08!448;UBERON:0004120!2.55e-08!448;UBERON:0006603!2.55e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.91e-22,203;UBERON:0002371,2.57e-19,76;UBERON:0002390,5.14e-17,98;UBERON:0003061,5.14e-17,98;UBERON:0002193,6.43e-17,108;UBERON:0001474,1.36e-16,82;UBERON:0002405,4.24e-16,93;UBERON:0004765,9.37e-15,90;UBERON:0001434,1.77e-12,100;UBERON:0000926,2.43e-12,315;UBERON:0004120,2.43e-12,315;UBERON:0006603,2.43e-12,315;UBERON:0002050,4.70e-09,564;UBERON:0002204,1.68e-08,167;UBERON:0000923,1.92e-08,560;UBERON:0010316,1.92e-08,560;UBERON:0005291,1.92e-08,560;UBERON:0006598,1.92e-08,560;UBERON:0010317,1.92e-08,560;UBERON:0002532,1.92e-08,560;UBERON:0005423,2.19e-07,581;UBERON:0000922,4.61e-07,592 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,3.00219895059391,0.446961094427288,0,0,0.631719873426831,0,0,0,1.74753097704138,1.05506791291381,0.247532705920093,0.331397375727916,8.0679017574213,2.41077811209591,4.38186054232424,2.92759679274304,0.984968464614303,0.408001382488506,0,1.14494394852423,2.18999080116615,4.01736446703369,0,0,0,6.29382842958246,1.91914699048606,1.70297735647684,0,0.90361775633475,0.369754010166788,0,0,4.69760702935756,0.553995408531877,1.40381113229099,1.51907609501096,0.671746422719773,0.971680998056939,0.515151135268373,2.18097358169347,2.64513160582167,2.18325655069035,1.62700325833979,4.11167888021826,2.78735733805593,7.76769459269806,5.89169625016932,9.93225365532058,3.10271112662957,1.29096936716765,0,2.25890807451126,2.18324920046277,3.14612878223118,2.75475503133812,1.28371610830437,2.55734850319616,11.8746468067218,9.97318288108159,13.6391920170462,2.61188314765726,2.26954089876456,2.4912889959823,4.77372463987812,6.25779502104242,8.68755378820467,1.21079900526674,2.20966581592539,2.84816148696796,5.91514801673437,2.97646019951061,3.35453832813401,3.14520167210186,2.85336096398862,5.30394436100364,2.85012743741249,2.18808344918999,4.01861138282195,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,2.10707267820062,0,0,0,0,0,0,0,1.22551502573691,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.829050053357545,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.602300476311091,0,1.24930726552346,0,0,0,0,0,2.43806866313962,2.01210257911091,0.511450247374121,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.850813354476611,0.443458794925128,1.05401742831751,1.0478326039817,0.364295288292542,1.11235332835329,8.43823223502177,7.83583817846703,9.04114131528283,0.238490624305342,0.571994910780128,0,2.58391129576717,0.860234595106124,2.08284300964557,3.39184765154406,2.09749718104953,2.47606237746061,2.71693456497854,1.55050055501597,2.49036383880697,3.3472061276467,0.805658634218294,0,0.976248230192678,1.10298924103761,2.43042584364528,3.30408994651095,0.673588117878509,1.91439516821648,0,0.949265659568129,1.46561395144326,6.58902087180316,0,1.3082821564276,1.98788780678127,2.02608818663328,2.38336525463794,4.87622255272983,2.12801029319014,0,3.20246987189115,1.97334038733728,1.24484414159907,1.48181739276657,2.7788523529288,1.21085942115945,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,0.23486899728753,0.323745888736263,0.421352420106746,0.204154171254893,0.737005903870608,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0.505008341862199,0.750711119231785,0.277064115484183,1.31693286264251,1.22595118319608,0.45071417671979,1.47461838108027,2.51145489964407,0.640672166455702,0.847727604638247,6.00182192168805,1.03052529238439,1.54584324027377,1.48893485065272,2.36286865137773,1.16924406193438,2.27190396819703,0.368199594569197,0,3.55009592516614,2.31729825923573,0.339121184620975,3.28543450377605,3.54569956768085,3.15485054927904,0.243947412259191,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,1.0647612003586,0.505754070234305,0.964044119533928,0.772057809126758,0.435758888184812,1.42362371466658,0.674156540800822,0.392442930250692,1.15424147083917,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,2.41450627898976,0,2.21163739305588,0.925884451585296,0,0,0,0.115930404975077,1.17408694235822,1.73239737313289,1.85194205030644,0.190254152234598,0,0,2.95460407304877,9.12616634043027,5.7966153292604,0,5.37542810236351,4.96212840348353,2.23896306757121,3.48760726216754,1.15014803749563,14.7798971368783,7.30802002309776,9.74442143041629,9.36779697210249,10.6043644078159,1.07946420296687,1.52795370223311,0,0,0.616964956219941,0,3.14409075893636,0.560655421726804,0.43596006883328,0.2933531432838,3.10252117818667,0,0,8.77595784730073,3.12022310734098,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,0,1.30294473717494,0.355391948742546,3.16780749173372,1.50719688529793,0,1.3996218765488,4.86495122564762,6.52934218861764,2.10833939483032,2.87549826589899,1.14861935834114,1.42636905040718,0.434343920002738,0.61642896765115,0.537182889719687,0,0,0,0.128343036279748,2.54094624222463,0,0,0,0,8.98808428736619,8.97484377612075,29.4235014539585,0,0.500170521059677,0,1.03985430765404,1.96271887676878,0.473107245101804,0.702848489956279,0.902838299183157,0,1.03473071292505,4.64957918974806,0.553107505625109,1.65078867489357,0.979005787313703,0.343143423810856,1.44737618286021,0.647142602455851,0.853820462427555,0.303127571446259,4.99306318531491,2.11673205330776,0.744323423456331,0.61384789315225,0.561320188866147,1.15325234330131,1.53512174720011,1.93024705372329,0,0.616838775210622,0.532685175939381,1.31403449622095,1.55776328755086,0.697262270759755,0.120859449591622,7.61924587152482,1.01289087829486,0.574072240823034,1.63882051206045,0.262248829918848,0.451199612907412,0.385076685522074,0.784349769176855,1.46139224653261,0.422206515571503,1.13733384070897,0.5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| |||
|short_description=p3@LPCAT2 | |||
}} |
Revision as of 03:39, 12 January 2014
Short description: | p3@LPCAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPCAT2_5end |
Coexpression cluster: | C3571_Neutrophils_Mast_CD14_Eosinophils_Dendritic_thyroid_Prostate |
Association with transcript: | 45bp_to_NM_017839, uc002eie.3_5end |
EntrezGene: | LPCAT2 |
HGNC: | 26032 |
UniProt: | Q7L5N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.98e-26 | 108 |
common myeloid progenitor | 1.98e-26 | 108 |
myeloid leukocyte | 2.81e-26 | 72 |
granulocyte monocyte progenitor cell | 2.23e-23 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-21 | 66 |
monopoietic cell | 1.39e-19 | 59 |
monocyte | 1.39e-19 | 59 |
monoblast | 1.39e-19 | 59 |
promonocyte | 1.39e-19 | 59 |
macrophage dendritic cell progenitor | 1.80e-19 | 61 |
defensive cell | 3.02e-19 | 48 |
phagocyte | 3.02e-19 | 48 |
classical monocyte | 6.51e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-16 | 42 |
hematopoietic oligopotent progenitor cell | 8.46e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.46e-08 | 161 |
hematopoietic stem cell | 3.31e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.91e-22 | 203 |
bone marrow | 2.57e-19 | 76 |
hematopoietic system | 5.14e-17 | 98 |
blood island | 5.14e-17 | 98 |
hemolymphoid system | 6.43e-17 | 108 |
bone element | 1.36e-16 | 82 |
immune system | 4.24e-16 | 93 |
skeletal element | 9.37e-15 | 90 |
skeletal system | 1.77e-12 | 100 |
mesoderm | 2.43e-12 | 315 |
mesoderm-derived structure | 2.43e-12 | 315 |
presumptive mesoderm | 2.43e-12 | 315 |
embryonic structure | 4.70e-09 | 564 |
musculoskeletal system | 1.68e-08 | 167 |
germ layer | 1.92e-08 | 560 |
germ layer / neural crest | 1.92e-08 | 560 |
embryonic tissue | 1.92e-08 | 560 |
presumptive structure | 1.92e-08 | 560 |
germ layer / neural crest derived structure | 1.92e-08 | 560 |
epiblast (generic) | 1.92e-08 | 560 |
developing anatomical structure | 2.19e-07 | 581 |
embryo | 4.61e-07 | 592 |