FFCP PHASE1:Hg19::chr17:41394342..41394365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:41394342..41394365,+ | |||
|id=chr17:41394342..41394365,+ | |||
|ontology_enrichment_celltype=CL:0002032!2.00e-07!165;CL:0000837!2.00e-07!165;CL:0000037!3.63e-07!172;CL:0000566!3.63e-07!172;CL:0000988!4.77e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000159;9.14e-14;2!CL:0002127;3.92e-08;1!CL:0000911;3.92e-08;1!CL:0000814;3.92e-08;1!CL:0000946;1.00e-07;1!CL:1001319;1.00e-07;1!CL:1000600;1.00e-07;1!CL:0000319;1.00e-07;1!CL:0000313;1.00e-07;1!CL:0000786;1.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.41e-13,2;CL:0002127,3.80e-08,1;CL:0000914,3.80e-08,1;CL:0000911,3.80e-08,1;CL:0000814,3.80e-08,1;CL:0002042,3.80e-08,1;CL:0002039,3.80e-08,1;CL:0002040,3.80e-08,1;CL:0002041,3.80e-08,1;CL:1001319,4.99e-08,1;CL:1000600,4.99e-08,1;CL:0000319,1.35e-07,1;CL:0000946,1.64e-07,1;CL:0000786,1.64e-07,1;CL:0000980,1.64e-07,1;CL:0000313,1.99e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.66e-36!235;DOID:14566!3.87e-35!239;DOID:0050687!1.04e-22!143;DOID:305!6.73e-22!106;DOID:0050686!1.73e-21!137;DOID:1749!1.13e-11!14;DOID:2531!2.45e-11!51;DOID:0060083!2.45e-11!51;DOID:0060058!2.15e-08!10;DOID:3119!1.19e-07!14;DOID:299!5.85e-07!25;DOID:1240!8.37e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.35e-16;14!DOID:2152;1.00e-07;1!DOID:3030;1.00e-07;1!DOID:6193;1.00e-07;1!DOID:12603;1.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.29e-16,14;DOID:162,4.87e-10,235;DOID:14566,9.77e-10,239;DOID:6193,1.04e-07,1;DOID:12603,1.18e-07,1;DOID:3030,1.35e-07,1;DOID:2152,1.99e-07,1;DOID:0050687,4.08e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.00e-07;1!UBERON:0004911;1.00e-07;1!UBERON:0001256;1.00e-07;1!UBERON:0001259;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.99e-08,1;UBERON:0001256,4.99e-08,1;UBERON:0001259,4.99e-08,1;UBERON:0004911,1.99e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39440961044543,0.710846162437108,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,1.60464513538047,1.91801137739712,0,0,0.852449501065388,0,0,3.11411124497787,0.251248665256743,0.521482918420201,0,0.605399502633369,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,2.24170287987055,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.22520107990516,1.30062222588003,0,0.497992903438899,0.797131363644112,0,0,0.211673582723883,0,0.280797178113459,0.684704037099577,0,0,2.87796022262726,0.321176150207399,0,1.70338495076131,0,0,0.223676107892416,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0.755798243562828,0.715880777515084,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.435753854075961,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0.75901493089674,8.42363868596007,0.210998064528027,0.163232808159148,0.848118428603645,0.432777279484182,0,0,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0.182454789215666,0.586993856796269,0,0,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,0.853828638089378,0,0,0,1.48000651186684,0,1.37588825977293,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,2.23073497220554,0.14405479798815,0,0,0.543616824294456,0.418411385249333,2.65195365854437,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.393709926058995,0.338693328263138,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.449947783103001,0.77380195455795,0,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,2.07047417247523,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.691743174681154,0.124980407962107,1.06154382279153,0.856396000634902,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,1.2288645437686,0.211312123358627,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0,1.25812753484717,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10057159113007,0.693153996902029,0,0,1.19349733269765,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0.945550727071746,0,0,0,0.560544326627578,0,0.863710364874486,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,0.687051635306701,0.365753774946808,0,0,0,0,0,4.17796627838873,0.356760272332706,1.58124514854544,0.109940516745429,0,0,0,0.940634592723046,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0.499705779624645,1.42843150884526,0.705789743431384,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0.26721740526556,0,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95367844666339,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:41394342..41394365,+ | |||
}} |
Revision as of 15:34, 20 January 2014
Short description: | p@chr17:41394342..41394365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41394342..41394365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.41e-13 | 2 |
innate effector T cell | 3.80e-08 | 1 |
immature NK T cell | 3.80e-08 | 1 |
effector T cell | 3.80e-08 | 1 |
mature NK T cell | 3.80e-08 | 1 |
immature NK T cell stage IV | 3.80e-08 | 1 |
immature NK T cell stage I | 3.80e-08 | 1 |
immature NK T cell stage II | 3.80e-08 | 1 |
immature NK T cell stage III | 3.80e-08 | 1 |
bladder cell | 4.99e-08 | 1 |
lower urinary tract cell | 4.99e-08 | 1 |
mucus secreting cell | 1.35e-07 | 1 |
antibody secreting cell | 1.64e-07 | 1 |
plasma cell | 1.64e-07 | 1 |
plasmablast | 1.64e-07 | 1 |
serous secreting cell | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.99e-08 | 1 |
wall of urinary bladder | 4.99e-08 | 1 |
mucosa of urinary bladder | 4.99e-08 | 1 |
epithelium of female gonad | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.29e-16 | 14 |
cancer | 4.87e-10 | 235 |
disease of cellular proliferation | 9.77e-10 | 239 |
epithelioid sarcoma | 1.04e-07 | 1 |
acute leukemia | 1.18e-07 | 1 |
mucinous adenocarcinoma | 1.35e-07 | 1 |
ovary epithelial cancer | 1.99e-07 | 1 |
cell type cancer | 4.08e-07 | 143 |